Sarcophilus harrisii (Tasmanian devil): 100917056
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Entry
100917056 CDS
T02286
Name
(RefSeq) ATP-binding cassette sub-family A member 3-like isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100917056
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shr02000
]
100917056
Transporters [BR:
shr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100917056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
RsgA_GTPase
AAA_23
Cas6_I-A
AAA_29
ABC2_membrane_2
Motif
Other DBs
NCBI-GeneID:
100917056
NCBI-ProteinID:
XP_031818164
LinkDB
All DBs
Position
1:119824771..120067245
Genome browser
AA seq
1712 aa
AA seq
DB search
MSGGTRISGGEGSATGDRQMMVFKQLRLLLWKNYILKKRNILVTIIEILLPLLLLGILIW
LRLIIKSKKFNAILYDNQFIDDLPVFFKNRSTDDLWELVYIPSNSEVVKDITEEVQKALH
KNLRVRGFLSEDDFKDYIKKHDHSSQVLAAIVFDHIFLKRDDPLPLKVKYSLRFHHYSQN
NQFSKIILGTLQLTWKTNILFPLIPTLGPREPTYSDGGEPGYIREGFLAVQHAVNKAIMR
YHAPEAANNIFNKITLIVKRFPYPAFFMDHFLEILQHMLPLLLVLAFTFTVLNIIRSIVL
EKEKKLKEYMLMMGLHNWLHWFSWFLVFFITFSIVIFFITILFHIKVKNGMAIFTKSNPV
LIFFFLMCFAISSISFGFMISTFFNKANLAATTGGVLYFVIYIPYFLIEPQYSSLSYRQK
LLSCLLSNVAMALGILLIVNFEKKGIGMQWKEFMSPINVNDNFTLGHVVLMLLYDSVFYG
LVAWYIEAVFPGEYGMPQPWYFFLLPSYWLKKPKMILKEKEEEDLEKSPQHEFFESDPTD
LQVGIKIKNLSKTFKKGKKTKEAVRNLNLNLYEGQITVLLGHNGAGKTTTLSILTGLFPP
TSGQVYISGYEISQNMVHIRKNLGVCPQHNIFFDEITVAEHLSFYAQLKGLPKKKCQEEI
DHILGILKMEPNRHAFSRTLSGGMKRKVSIGIALIAGSKVVMLDEPTSGMDPISRRATWD
LLQQQKSKRTIMLTTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKHKYGAGYHLIIVKE
PRCNIEEISHLILNYVPTATMESNVAAELSFILPKESSYKFESLFTELEEKQTELGIASY
GVSVTTMEEVFLRVSKLVDSSIDLQAIQLPTLKYKKNTEDTEDSENLDDSSELELKSLSK
KKSHVKLNTGFCLHCQQFFAMLVKKIMYSWREWKILVAQILLPLICTALGLTAINYSKIS
DAPAPSLKLSLNVYGKTFVPYNFSGTSLDPKLKKIFLQTLNNDGHTPIPVTGNLDKELLS
KAKENENFDNYYLIAFSFKQYGNHTLITAFFNNQAFHTPSIVVSVIDNILFKLLSGPQAS
ITVFNHPQPRSELQIKNDQYFGGSLAFDIAIHLLYGMGSLASTFSIVAVSERVIKAKHIQ
FVSGVYAFNFWLSSLLWDLIIFFIPCLLLLGLFKIFDVQAFVEDNHSADILLILMLYGWS
VIPLMYLMSFFFMASVTAFIRLVMFNFFSGIVTLIVLHILNIKELQLEKLAKFLERLFFL
LPSHNLGMTIKTFINNFDTKKYCTSSDLTFFNCEILSIKYEDDFYAWETPGIGKFLISQV
ASGFFFFKLLLFIEANILWRMKILLSHLFRARNWAQVHSKESDFSIDEEVEQERKKIEES
FSELLQSTPLVIKQLTKVYGRRVRLLAVNRISLTVQKGECFGLLGFNGAGKTTTFKMLTG
DETITSGTAYIDGYNIITHIKKVQQRIGYCPQFDALLDYMTGHETLVMYARLHGIPEHHI
NSLVKDMLQGLLLEVHSDKLIKTYSGGNKRKLSAGIALIGEPSVVFLDEPSTGMDPVARR
LLWDAITRSRESGKAIVITSHSMEECEALCTRLSIMVKGQLKCIGSPQYLKNKFGSGYTL
LAKIKSSNEKDNMTIFKKFIEETFPGSILEDEHQGIVHYHLPFRDLNWAKVFGILEKNKD
QYELDDYSISQISLEQIFMNFFRIQQLSEEEG
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaggcacgcgtatctcggggggcgagggaagcgccaccggggacagacaaatg
atggtgttcaagcaacttagacttcttctatggaagaattatatcttaaagaaacggaac
atcctagtaacaatcatagaaatccttctaccattgttgttattggggattttaatttgg
cttcgcctgattattaagtcaaaaaaatttaatgctatcctgtatgataaccagttcatt
gatgatctgcccgtgtttttcaaaaatcgttctacagatgacctatgggaactggtttat
attccttccaacagtgaagttgtgaaagatatcactgaggaggtgcaaaaggccttacac
aaaaatttaagagttcgaggctttctctcagaggatgattttaaggattatattaaaaaa
catgatcattcttcacaagtgttggctgccattgtttttgaccacatttttctaaaaaga
gatgaccccttgccacttaaggttaagtatagtctgcgatttcatcattattcacagaat
aatcagttcagcaaaattattcttggaactttgcaactgacctggaaaactaacatactt
tttccactcattccaacccttgggcctagagaacccacttattctgatggaggagagcct
ggatatatcagagaaggatttttggcagtgcagcatgctgtgaacaaagctatcatgagg
tatcatgcaccagaagctgccaacaatatatttaacaaaatcacattaattgtgaagagg
tttccttatccagctttctttatggaccatttcctcgagattttacagcatatgctgcct
ctgcttcttgtgctggcctttactttcactgtactgaatatcatccgtagcattgtgctt
gagaaggagaaaaaactgaaggagtatatgctaatgatgggactccacaactggctacac
tggttttcctggtttcttgtgttttttattaccttctccattgttatatttttcatcact
attctctttcatatcaaggtgaaaaatggtatggcaatattcaccaaaagtaacccagtt
ttgatatttttctttctgatgtgttttgcaatatcctccatctcctttggcttcatgatc
agcacattctttaataaagccaatttagctgctactacaggaggtgtcctctactttgtt
atctacatcccatatttccttattgaacctcaatatagctcgctgtcttatagacagaag
ttattatcttgtctcctgtcaaatgttgcgatggcattaggaattctgctcatagtcaac
tttgaaaagaaagggataggcatgcaatggaaagagttcatgtcacctattaatgtaaat
gataacttcactttaggacatgtggtattaatgctactatatgactctgttttttatggt
ttggtggcctggtatatagaagctgtgtttccaggagaatatggtatgccccagccctgg
tatttcttcttgctgccttcctactggttgaagaagccaaaaatgattttaaaagaaaag
gaggaggaagatcttgagaaatctccacagcatgaattctttgagtctgaccctacagac
ctgcaagtaggaataaagataaaaaatttgtccaagacttttaaaaagggaaaaaagaca
aaagaagctgttagaaacctgaatttgaacttgtacgaagggcaaatcactgttctccta
ggacataatggagcagggaagactactacactatccatactcacaggtctctttcctcct
acaagtggacaagtatacattagtgggtatgagatttcacagaatatggttcatattcgg
aagaatctgggtgtatgcccccagcacaatatcttctttgatgaaataacagttgctgaa
cacctttcgttttacgctcagctaaaaggattgcctaagaaaaaatgccaggaggaaatt
gatcatatcttgggcattcttaaaatggaacctaaccgccatgctttttcaaggacattg
agtgggggaatgaaacgaaaggtttccattggtatcgctctcatagcaggctccaaggta
gtgatgttggatgagccaacatctggcatggatccaatttctcgtagggctacttgggat
ctacttcagcagcagaaaagtaaacgaacaattatgctaaccactcactttatggatgag
gctgacctattgggagatcgcattgctatcatggcaaaaggggaattgcagtgctgtggc
tcttcactttttctcaaacacaaatatggtgcaggataccacttgatcatagtgaaggaa
cctagatgtaacattgaggaaatttcccatctgattcttaattatgtaccaactgccaca
atggaaagtaatgttgcagctgaattatcatttatcctgcccaaagaaagctcatacaaa
tttgaatctctatttactgaactggaagaaaaacagacagagttaggtattgccagctat
ggtgtttctgtcactacaatggaagaagtcttccttagggtcagtaaattggtggattct
agcattgatctccaagcaatccagctcccaacattgaaatacaagaaaaatacagaagat
acagaagatagtgaaaatcttgatgactcaagtgaattagaactgaagagtctatctaaa
aagaaatctcatgtgaaattaaataccggattttgtcttcactgccagcagttctttgcc
atgttggtgaaaaagattatgtatagttggcgtgagtggaagatattagtcgcacagatt
cttttgcctctgatttgtactgccctaggtcttacagccatcaactattctaaaatttca
gatgcacctgctccttctctaaaattgtccttaaatgtatatggtaagacatttgtgcct
tacaacttctctggaacttctctggatccaaaactcaaaaaaatctttcttcaaactttg
aataatgatggacatacacccattccagtgacaggcaacctggacaaagaactgctttct
aaggcaaaagagaatgaaaactttgataattattaccttatagcattttccttcaaacaa
tatggaaatcacacattaatcactgctttcttcaacaatcaggcattccatactccttcc
atagtagtatcagttatagacaatattctattcaagttgctttctggcccacaagcttcc
attactgtcttcaatcatcctcagcctcgaagtgaattgcaaattaaaaatgatcagtat
tttgggggaagcttggcatttgacattgctatccacctactctatggaatgggttcattg
gccagtacattttcaatcgtggcagttagtgaaagagtcataaaggcaaagcacatccag
tttgtcagtggggtctatgcttttaatttctggctgtcttccctgttgtgggatctcatt
atcttcttcattccctgtttgctgctgttggggctgttcaaaatctttgatgtacaagct
ttcgttgaggacaaccactctgcagatatattgctaatattaatgctttacggctggtct
gtcattcccctcatgtacctaatgagcttcttcttcatggcaagtgtcactgccttcata
agactcgtcatgttcaacttcttctcaggaattgtcaccctaatcgtccttcatatctta
aacataaaggaactccaattggaaaaactcgctaaatttctggaaagattattcttcctg
ctacctagtcacaatttagggatgaccatcaaaactttcatcaacaactttgacaccaag
aaatactgtacttcctctgatcttacattctttaattgtgaaattctcagtataaaatat
gaagatgatttctatgcatgggaaactccaggaattggaaaattcttgatctcacaggtt
gcctctggcttttttttcttcaaattgcttttattcattgaggccaacattctctggaga
atgaaaatcctactaagtcatctttttagagctcggaattgggcacaagtacatagcaaa
gaatcagacttttccatagatgaagaagtagaacaagaaagaaagaaaattgaggaatcc
ttttcagagcttttgcagagtactccactggttattaaacaactcacaaaggtatatggc
agaagagtgcgcctcctggctgtaaacaggatttccttaactgttcagaaaggggaatgt
tttggattgcttggcttcaatggagcagggaaaaccacgaccttcaaaatgctgacgggg
gatgaaacaatcacctctgggacagcctatattgatggctacaacatcattacccacatt
aaaaaggtacaacaacgaattggctactgccctcaatttgatgccttactggattacatg
acaggacatgagactttggtcatgtatgcccggcttcatggcatccctgagcaccacatt
aatagccttgtgaaggatatgctgcaggggttgcttctagaagtccactcagacaaactc
atcaaaacctacagtggtggcaataagcgtaaactgagtgctggtattgccctaatagga
gagccctcagtcgtcttcctagatgaaccatccacaggcatggatcctgtagcccgacgc
ttgctctgggatgcaataacaaggagtcgtgaatctggaaaagccattgtcatcacctct
catagcatggaagaatgtgaggctttatgtaccaggctgtccatcatggtgaaaggacag
ttgaagtgcataggcagcccacagtacctcaaaaacaagtttgggagtggatacactttg
ctggccaagatcaaaagcagcaatgaaaaggacaacatgacaatattcaaaaagttcatc
gaagagacattcccaggcagcatcctcgaggatgagcaccaagggatagttcactaccac
ctgcctttccgggaccttaactgggcaaaggtgtttggtatcttagaaaaaaacaaagat
caatatgaactggatgattactccatcagtcagatctccctggagcaaatcttcatgaat
tttttccgcatacaacagctttcagaagaagaagggtga
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integrated database retrieval system
