Sarcophilus harrisii (Tasmanian devil): 100917227
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Entry
100917227 CDS
T02286
Symbol
HNF1A
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04950
Maturity onset diabetes of the young
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09160 Human Diseases
09167 Endocrine and metabolic disease
04950 Maturity onset diabetes of the young
100917227 (HNF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100917227 (HNF1A)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
100917227 (HNF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
Homeobox_KN
KPBB_C
Motif
Other DBs
NCBI-GeneID:
100917227
NCBI-ProteinID:
XP_031804595
UniProt:
A0A7N4PW12
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Position
1:699124084..699155588
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AA seq
613 aa
AA seq
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MVSQLSQLQTELLAALLESGLTKETLIRALSETGPYDLTGESSVDKREPCGSELAELPNG
LGEPRGSEDDTDDEGEDFTPPILKELENLSPEEAAHQKAVVETLLQEDPWRVAKMVKSYL
QQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQFTHAGQG
VLAEEPMGDELPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEECNRAECIQ
RGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDTFSGPQTGPGPSLSAHGSP
GLPPPSISPSKVHATGVRYGQQPTSEAESSGGSGHGGGSMVTTPTVLHQISPPGLEPSHS
LLSTDAKLVSASGGTLPPVSTLTALHNLEATPPGINQQPQNLIMASLPGVMAIGAGEPSS
LGPTFTNTGASTLVIGLASSQAQSVPVINSMGSSLTTLQPVQFSQSLHPSYQQPLMQQVQ
GHMAQSPFMATMAQLQSPHALYSHKPDVAQYTHTGLLPQTMLITDTANLSALASLTPTKQ
VFSSDSEAPSESGLHTPVSQASAIHIPSQDPVSSSSLVLYQGSDSTSSHSQLLSSNHGVI
ETFISTHMASSSQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtctcccagctaagccagttacagacagagctcttggctgctctattggaatcagga
ctgaccaaggaaaccctgatccgggccttgagtgagacaggaccctatgacctgacggga
gagagctctgtggacaagagggagccctgtggcagcgagctggccgagctccccaatggg
ctgggagaaccacgggggtctgaggatgacacggacgatgagggggaggatttcacgccc
cctatcctgaaggagctggagaacctcagcccagaggaggcagcccaccagaaggctgtg
gtggagacgctcttacaggaggatccgtggcgtgtggcaaagatggtcaaatcctacctt
caacagcacaacattccccagagggaagtggtagataccactggcctcaaccagtcccac
ctatcccagcacctcaacaaaggcacccccatgaagacccagaagcgggcagccctgtat
acctggtatgtccgcaagcagcgggaggtggcccagcaattcacacacgcgggacagggc
gtactggctgaggagcccatgggagacgaactgcccaccaagaaagggaggagaaatcgt
ttcaagtggggtccggcctctcagcagatcctgttccaggcttatgaaaggcagaagaat
cccagcaaggaggagagggaagctttagtggaggagtgtaacagggctgagtgtatccag
agaggggtctccccatcacaggcccagggtttgggctctaacctggtcaccgaggtgcgt
gtctacaactggtttgccaaccggcggaaagaagaggccttccgacataagctagccatg
gacacattcagcgggcctcagactggccctggcccttcactctcagctcatggctcccca
ggcctccctcccccttccatctctcccagcaaagtccatgctacaggtgtacgatatggc
caacagccgacaagcgaggcggaatcgtctgggggaagcggccacggagggggcagcatg
gtaacaacccccaccgtcctgcatcagatatcccccccaggactggagcccagtcacagc
ctgctcagcacagatgccaagctggtctcagcatctggggggacccttccccccgtcagc
accctgactgctctgcacaatttagaggcaacacccccagggatcaaccagcagccccag
aatttgatcatggcctccctccctggggtcatggccattggggcaggagagccttcttcc
ttgggccccaccttcaccaacacgggagcttctaccttggtcattgggttagcctccagc
caagctcagagcgtgcccgtcatcaacagcatggggagcagcttgacaaccctgcagcct
gtccagttctcccagtcactgcatccctcctatcaacagccgctcatgcagcaggtgcag
ggtcacatggcccagagccccttcatggccaccatggcccagctacagagtcctcatgcc
ctctacagtcacaagcccgatgtcgctcagtacacacacacaggcctcctcccccagacc
atgctcatcacagacaccgccaacctcagtgcgcttgccagcctgacgcccaccaagcag
gtgttcagctcagactcggaggctcccagcgagtccggcctacacacgcctgtgtctcag
gcttccgccatccacatccccagccaggacccagtgtcgtccagcagcctggtactgtac
cagggctcggactccaccagcagccacagccagctcctgtcctccaatcacggcgtcatc
gagaccttcatctccacacacatggcgtcttcctctcagtaa
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