Sarcophilus harrisii (Tasmanian devil): 100917328 Help Entry 100917328         CDS       T02286                                  Symbol COL4A3 Name (RefSeq) collagen alpha-3(IV) chain   KO K06237   collagen type IV alpha Organism shr  Sarcophilus harrisii (Tasmanian devil) Pathway shr04151   PI3K-Akt signaling pathway shr04382   Cornified envelope formation shr04510   Focal adhesion shr04512   ECM-receptor interaction shr04820   Cytoskeleton in muscle cells shr04926   Relaxin signaling pathway shr04933   AGE-RAGE signaling pathway in diabetic complications shr04974   Protein digestion and absorption shr05146   Amoebiasis shr05165   Human papillomavirus infection shr05200   Pathways in cancer shr05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:shr00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     100917328 (COL4A3)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100917328 (COL4A3)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     100917328 (COL4A3)   09142 Cell motility    04820 Cytoskeleton in muscle cells     100917328 (COL4A3)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     100917328 (COL4A3)   09154 Digestive system    04974 Protein digestion and absorption     100917328 (COL4A3)   09158 Development and regeneration    04382 Cornified envelope formation     100917328 (COL4A3)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     100917328 (COL4A3)   09162 Cancer: specific types    05222 Small cell lung cancer     100917328 (COL4A3)   09172 Infectious disease: viral    05165 Human papillomavirus infection     100917328 (COL4A3)   09174 Infectious disease: parasitic    05146 Amoebiasis     100917328 (COL4A3)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     100917328 (COL4A3)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:shr04147]     100917328 (COL4A3)    00536 Glycosaminoglycan binding proteins [BR:shr00536]     100917328 (COL4A3) Exosome [BR:shr04147]  Exosomal proteins   Exosomal proteins of other cancer cells    100917328 (COL4A3) Glycosaminoglycan binding proteins [BR:shr00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100917328 (COL4A3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  100917328 NCBI-ProteinID:  XP_031813804 Ensembl:  ENSSHAG00000012337 UniProt:  G3WG93 LinkDB All DBs Position 3:complement(54099889..54245764) Genome browser AA seq 1674 aa AA seqDB search MSPGGASGRVLPMLLLTRLLLLLLLVVAPAMGKGCVCSDKGPCFCDSRKGDKGEKGFPGC PGTPGQKGLPGPEGIPGPQGPKGSPGLPGFIGSKGTRGMTGLPGFPGPPGLPGTPGNTGP YGPPGLPGCNGTKGDQGFPGPPGTPGLPGLPGTNGLKGEKGAPAREEGIENGERGDPGLP GIPGRQGLPGPPGFPGPPGPQGPPGFLGFPGEMGPPGPKGHMGVKGIGEKGDRGMKGLTG PPGPPGTVIITLTGPENLTDYKGDKGDKGSVGEPGPPGPKGLPGESYGSEKGVPGDPGPR GKPGKDGAPGFPGFPGAKGEKGFPGLTGETGAKGFKGDPGPGGFRGPTEYYNGYLEKGND GIPGAPGPKGDRGSHGPRGPPGDVGRPGASRPGLRGTPGSPGIKGSKGERGPPGVNIMGP PGLPGLPGTPGSKGLPGLPGPPGKVTFQNGPPGDHGDPGHLGSPGIPGAYGPKGEPGPLC TQCIYTPGPPGLPGLPGLDGEKGTEGGQGPDGLKGSPGSPGYTGLPGFPGFPGTPGYQGQ KGEKGETSYEGEVGDRGDPGVRGEPGKRGSDGIPGKPGTKGLPGTKGEPAVNGEKGDKGF PGNPGDPGYPGPMGPAGPSNYGPPGQPGPKGAAGVPGFPGSPGNDGPKGEPGLVEPVPGP PGPPGLPGLPGLPGTTGNPGSKGPSGNPGPPGSDGEAGFPGIGVPGPPGYKGDRGDPGAK GSPGCPGEIGNPGSPGLPGLPGAKGDPGTAMPGKEGITGFQGEKGNLGENGENGIPGLPG LPGPPGNKGHDGSPGEPGFPGPPGYDGIPGICIPGAKGTQGLPGLNGLKGPQGDRGLEGP KGDPGIPGLDRSGSPGEPGPPGLPGHQGDKGLRGPAGYPGAPGPPGPPGQKGEVGIMGYP GTIGPPGIPGNPGTPGHKGNLGIPGRKGQKGLPGVQGERGNKGNEGPSMISDDVGEKGEP GPEGSLGGLGQKGERGTPGVPGSQGYDGMPGRPGLPGLRGDPGTMGHPGEPGPPGGPGSM GYMGMPGPKGKKGTVGHTGETGRPGLPGIQGMKGEKGEPGYIRDARPGPPGPKGEPGPPG SLGKKGGRGLPGLPGPIGPSGAEGNQGSSGNRGPPGNPGPAGDLGFKGCKGFPGPPGIKG PPGPPGAPGPPGLMGEKGKQGGDAIPGSAGEKGELGLLGALPGPRGLPGLEGDKGNEGSP GLPGMYGVKGVMGDVGPIGPIGRTGPPGPPGFPGALIPGQKGNQGPPGLGGIKGDRGPPG PPCEYTLGIKGEKGFPGNQGPTGQPGIIGDPGPPGHLGMPGTPGFPGSRGDPGFQGFPGM TGEKGNLGPPGPFGPPGSIGPKGPPGQPGEPGTIKIISLPGSPGPPGRPGDPGMQGEPGA QGPPGYPGLQGLRGSPGKPGKPGIPGPAGEKGNKGSKGEIGPPGSVGLPGLKGKPGNFGP PATGPSIRGFIFTSHSQSTEIPSCPTGTVPLYSGYSLLFVQGNEQAHGQDLGTLGSCLQR FTTMPFLFCNTNEVCNFASRNDYSYWLSTTAQMPMNMAPITGRALEPYISRCTVCEGPSM AIAVHSQTTDIPLCPDGWISLWKGFSFVMYTSAGSEGSGQALASPGSCLQDFRANPFIEC HGRGTCNYYSNSYSFWLASLNPRRMFRKPTPSTVKAGDLEKIISRCQVCMKRRD NT seq 5025 nt NT seq  +upstreamnt  +downstreamnt atgagccccgggggcgcgtccgggcgggtgctgccaatgttgctgctgactaggctgctg ttgctgctacttcttgtggtggctcccgctatgggcaagggctgtgtctgttcagacaaa ggtccatgtttctgtgacagcaggaaaggcgataagggtgagaaaggttttcctggttgt cctggtactcctggccagaaaggactgcctggtccagaaggtatacctggacctcaggga cccaagggctctccagggcttccaggctttattggttccaaaggcacaaggggaatgaca ggattaccaggttttccaggtcctccaggacttccgggaactcctgggaatactggtcct tatggacctcctggtttgccaggatgcaacggcactaagggggaccaaggatttccagga cctccagggacaccaggtcttccagggttaccaggcaccaatggattaaaaggagaaaaa ggagctccagctcgtgaagaaggcatagaaaatggtgaaagaggtgatcctgggttacca ggaatcccaggacgtcagggtttgcctggccccccaggatttcctggaccacctggacca caaggacccccaggatttttaggttttccaggagaaatggggcctccaggaccaaagggt cacatgggtgttaaaggaattggagaaaaaggagatcggggtatgaaaggtttaacagga ccccctggaccaccaggaacagttattataacacttactggaccagaaaacctaacggac tacaaaggggataaaggagacaaaggatcagtgggtgagccaggacctccaggaccaaag gggctacctggagaatcttatggatctgaaaaaggtgttcctggagaccctggtcctcgg ggaaaacctgggaaagatggtgcccctggtttccctggatttccaggagctaagggtgaa aagggtttccctggattaactggagaaactggcgctaagggatttaaaggagaccctggt ccaggaggatttcgtggtccaacagaatattacaatggatacctggagaaaggcaatgat ggaattcctggggctcctggacccaaaggagatcggggttcacatggacccagaggtcca ccgggagatgttggtagacctggggcatcaagacctggtcttaggggtactccaggatct cccggaatcaaaggaagtaaaggagaaagaggaccacctggagtgaatataatgggtcct cctggacttcctggacttccagggaccccaggctccaaggggttacctggccttccagga ccaccaggtaaagtaacttttcagaatggtcctccgggagaccatggagatccaggacat ttggggtctccaggcatacctggagcctatggacccaaaggagaaccaggaccactgtgt acccaatgtatttatactccaggacccccaggtctgccaggtttgcctgggttagatggt gaaaaaggaactgaaggagggcaaggacctgatggcttaaagggaagcccaggatctcca ggatatacaggtctaccaggctttccaggattcccaggtactccaggatatcagggacaa aagggagaaaaaggtgaaacatcatatgaaggagaagtaggagatcgaggggatccagga gtcagaggggagcctggaaaaaggggctccgatggaattcctggaaaacctggcacaaaa ggactgccaggcacaaaaggagaaccggctgtgaatggtgaaaagggggataaaggtttt ccaggaaatcctggtgaccctgggtacccaggacccatgggaccagctggaccatccaac tatggaccaccaggacaacctggaccaaagggagctgcaggtgtacccggatttcctgga tcacctggaaatgatggtcccaaaggagaaccaggtctagtagaaccagtccctggccct ccaggacctcctggattgccagggctacctggcctcccaggtacaactggaaatccagga tccaagggaccaagtggtaatccaggtcctcctgggtctgatggtgaagcaggattccca ggaattggagttcctgggcctcctggatataagggagacagaggtgatccaggagccaaa ggatcaccaggttgtccaggagaaatagggaaccctgggtcacctggactaccaggacta ccaggagcaaagggagacccaggtacagcaatgcctggaaaagaagggatcactggtttt caaggagaaaaaggaaatttgggggaaaatggagaaaatgggatccctgggcttccaggc cttccagggcccccaggaaacaaaggacatgatggatcaccaggagagcctggctttcct ggacctccagggtatgatgggattccaggaatctgtattccaggtgcaaagggaacccag ggacttccaggtttaaatggactaaaaggaccacaaggagacagaggcctggaaggtcct aaaggggatccaggaataccaggcttagacaggtcaggatccccaggggaacctgggcca ccaggactgccgggtcatcaaggggataaaggacttagaggtcctgcaggatatccagga gctccgggacccccaggtccaccaggccaaaagggagaagttggaataatgggttatcct ggaacaattgggcctcctgggattcctgggaatccaggcactccaggacacaagggtaat ttgggaattccaggaagaaagggacagaaaggacttcctggagtacaaggggaaagaggt aataaaggaaatgaaggaccatcaatgatatcagatgatgtaggagagaaaggtgaacca ggaccagaaggatctttgggaggccttggccaaaaaggagagagaggcactccaggtgta ccaggatcacaaggctatgatggaatgcctggaaggccagggctaccaggactcagagga gatcctggcaccatgggtcaccctggggaaccaggaccacctggaggacctggaagcatg gggtacatgggaatgccaggtccaaagggaaaaaaaggaactgtaggtcacacaggtgaa actggcagaccaggccttcctggtattcagggcatgaagggagagaaaggagaaccaggc tatataagggacgcacggccgggacctccagggccaaagggagagccaggacccccagga tccttaggtaagaaaggaggaagagggttaccaggtctaccaggtcctattggaccttct ggagctgaaggaaaccagggaagttctggaaatcgtggccctccaggaaaccctggacct gctggtgatttgggatttaaaggatgcaaaggtttccctggtcctccaggaataaaagga ccgccaggtcctccaggtgctccaggacctcctggactaatgggtgaaaaaggtaaacaa ggtggggatgcaattcctggttcagcaggagaaaaaggagaactaggtttactaggggca cttccaggtccaagaggccttcctggtttagaaggagacaaaggaaatgaaggaagtcca ggtttacccggcatgtatggtgtaaaaggtgtgatgggcgatgtaggaccaataggcccc attggtaggacaggcccaccaggcccaccaggttttcctggtgcactaattccaggccaa aaaggaaatcaaggtcctccaggcttgggaggaattaaaggagatcgtggtcccccaggc ccaccttgtgaatacacattaggaataaaaggagaaaaaggttttccagggaaccaaggt ccaactggtcaaccaggaatcataggagaccctggaccccccgggcatctgggaatgccg ggtaccccaggtttcccagggtctagaggagatcctggatttcaaggatttcctggcatg acaggtgaaaagggcaatctaggacctccaggaccatttggacctcctgggtcaattggg ccaaaaggacctcctggtcaacccggagaacctggaacaattaaaattatatctctgcca gggagcccagggcctcctggtcgacctggagacccaggaatgcagggagaaccaggagca caaggaccaccaggatatccaggacttcaaggactaagaggttcaccagggaaaccagga aaaccaggaatccctggaccagccggagaaaaaggcaacaaaggatctaaaggagaaatt ggcccacctggatcagttggattgcctggattaaaaggaaagcctggaaactttggacca cctgcaactgggccctccatcagaggctttatcttcaccagtcacagtcaatcaacagag attccttcatgcccaacaggaacggtgcccctttatagtggctattcccttctctttgtg cagggaaatgaacaagctcatggacaagaccttggaactcttggtagctgcctacaacgt tttaccacgatgccattcttgttctgtaataccaatgaagtgtgcaattttgcttcacga aacgactattcttactggctgtcaacaacagcacagatgcccatgaatatggctccaatt actggcagagctctggagccttatattagcagatgtacagtctgtgagggtccttccatg gccatcgctgttcacagtcaaaccacagacatccctttatgtcctgatggatggatttct ctttggaaaggattttcttttgtcatgtacacaagcgcaggctcagaaggctctgggcaa gcactagcatcgcctggatcctgcctacaagacttccgtgccaatccatttatagaatgc catggcagaggaacctgcaactactattcaaattcttatagtttctggttggcttcctta aatccaagaagaatgttcagaaaacctactccatccactgtgaaagccggggacctggaa aagataatcagtcgctgtcaggtctgcatgaagagaagagactga

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