Sarcophilus harrisii (Tasmanian devil): 100917342
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Entry
100917342 CDS
T02286
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shr03041
]
100917342 (DDX20)
Enzymes [BR:
shr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100917342 (DDX20)
Spliceosome [BR:
shr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
100917342 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
SiaC
CMS1
Motif
Other DBs
NCBI-GeneID:
100917342
NCBI-ProteinID:
XP_031823157
Ensembl:
ENSSHAG00000014518
UniProt:
G3WNS6
LinkDB
All DBs
Position
4:414025454..414040235
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AA seq
826 aa
AA seq
DB search
MAAAAAAAATANTRGGAMVAGLAPGPDPSADPGEAGQGRSLRTAHDVGGPRARTGDVLLA
EPADFGSLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTV
ALDSLILENLATQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLK
KCHIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQM
LAVSATYPEFLASALTRYMRDPTFVRLNSSDPSLIGLKQYYKVVNSHPLPHKIFEEKTQH
LQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGSMNQNQRLDAMAKLKQFH
CRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLAVTYCCRGEEE
NMMMTIAQKCNLNLLCLPDPIPPGLMEECLDWDVEVKAAVSTVGSINAPIQPPKTIQKPD
RIIQAQKAQSSHMALSQTASGPTGMVKSKKVPKQKHPGRSHSEYGTREKAELSRGLGYAT
QLKDPVENYIQTPVESSSIFQNQAREASLATLPKIPCLSSFKIQQPCIETFSELVEDYEH
YIKEGLEKHVEIIRHYTGPGEQALQPQNGLLKWRHTQESPRALVSSGRSEDSASDSDSGC
SRASSQSKGNKSCLEGSSDNQVRESELASMTGHASPDHPLNRSETPSVEESQEVLHIPMK
ALGREDGSNQTSKRSRKSVPKRAPHQLQWEPQEESWCDHAGEQPPVFPTNPQSYEDYWRS
CYWAWQEYYAAASQSYSWNAKRHSDWMAAYHMNTIYLQELMRGGDL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggcggcggcggcggcggcgacggctaatactcgcggcggcgcgatggtggcg
gggctggccccggggcccgacccctccgcggatccgggggaagccgggcagggccggagc
ctgcggacggctcacgacgtgggaggcccgcgggcgcgcaccggggacgtgctgctggcc
gaaccggcggacttcgggtcgttgctgctgtcgcggccggtgctggaggggctgcgggcg
gcgggcttcgagcggccctcgccggtgcagctcaaagccatcccgctgggccgctgcggc
ctggatttaatcgtgcaggccaagtctggcactgggaaaacctgcgtcttctccaccgtg
gctctagattcgctgatcctcgaaaacctggccacccagatcttgatcttagctcccacg
agagagatcgctgtgcagatccattccgttatcacggccattggcatcaagatggaaggt
ttagaatgccacgtatttattggagggacgcctttatctcaagacaagaccagacttaaa
aaatgccatattgctgttgggtctcctggcagaattaaacaattaatagaacttgactac
ttgaacacagccagtatccgtctttttattcttgatgaggcagataaacttctagaagaa
ggaagcttccaggaacaaataaattggatttattcctctctgcctgccaacaaacagatg
ctggcagtatcagctacctaccctgaattcttggccagtgctttgacgaggtacatgaga
gaccccacatttgtaaggctgaattccagtgacccaagtcttattgggttgaagcagtat
tacaaagtggtgaattcacatcctttgcctcataagatttttgaagaaaagactcaacac
ttgcaagaattattcagtagaattccatttaatcaagctttggtcttctctaatttacat
agcagagcccagcatttggctgatatcctgtcatccaagggctttcctgctgagtgcatt
tcaggtagtatgaatcaaaaccaacgtcttgatgctatggccaaactgaagcagttccat
tgcagagtcctcatttcaacagatttgacttcacgtgggattgatgctgagaaggtgaat
ctggttgtaaatttggatgtgccattggactgggaaacgtacatgcatcggattggcaga
gctggacgttttggtactttggggctagctgtaacctattgttgccggggagaggaagaa
aatatgatgatgacaattgcccagaagtgtaatcttaacctcctctgtttgccagatcca
attcctcctggcctgatggaagaatgtttggattgggatgtcgaagtcaaagctgccgtg
tctacagttggctcaattaatgcacccatccaacctcctaaaaccattcagaaaccagat
cggatcattcaggcacagaaagctcagagtagccatatggctctgtcccagacagcatca
ggtcctacaggaatggtcaaatcaaagaaagttcccaagcagaaacacccagggagaagc
cattcagagtatggaaccagagaaaaagcagagctctccagagggctaggctatgccaca
caattgaaagatccagtagagaactacattcagacccctgttgaaagctccagcatcttt
cagaaccaggccagagaagcttcacttgcgacactccccaagatcccttgtctgtcttcc
tttaagatccagcaaccctgcatagagactttttcagaattggtggaggattatgaacat
tacattaaggagggactagagaagcatgtagagatcatcaggcattacactggtcctggg
gagcaggccctgcagccccaaaatggtttattgaaatggagacacactcaagagagcccc
cgggcattggtgagcagtggccgctcggaagattcagcgagtgatagcgattctggctgc
tcacgagcatcgtcccagagcaaagggaacaagtcgtgtttagaaggctcttctgacaac
caggtgagagagagtgagctggcctccatgaccggccatgcttctcctgatcatcccttg
aatcgaagtgaaaccccgagtgtggaggaaagccaggaagttcttcatatccctatgaag
gccctggggagggaggatggatctaaccagacctcgaagcgcagccggaaaagcgttccc
aagcgggcaccccaccagctgcagtgggagcctcaggaggagagctggtgcgatcatgct
ggggagcagcctccggtgttccccaccaatcctcagagttacgaggattactggagatct
tgctactgggcctggcaggaatactatgcggcggcttcgcagtcctatagctggaacgcc
aagagacactccgattggatggcagcctatcacatgaacaccatctatcttcaggagtta
atgcggggtggtgacctgtga
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