Sarcophilus harrisii (Tasmanian devil): 100917435
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Entry
100917435 CDS
T02286
Symbol
CNTNAP1
Name
(RefSeq) contactin-associated protein 1
KO
K07379
contactin associated protein 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04514
Cell adhesion molecule (CAM) interaction
shr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100917435 (CNTNAP1)
04517 IgSF CAM signaling
100917435 (CNTNAP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
shr04990
]
100917435 (CNTNAP1)
Domain-containing proteins not elsewhere classified [BR:
shr04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
100917435 (CNTNAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
EGF
F5_F8_type_C_2
Laminin_G_3
Syndecan
Motif
Other DBs
NCBI-GeneID:
100917435
NCBI-ProteinID:
XP_003768236
Ensembl:
ENSSHAG00000013557
UniProt:
G3WKF5
LinkDB
All DBs
Position
4:338206773..338225727
Genome browser
AA seq
1367 aa
AA seq
DB search
MGISLLCILLAAVTGARGWGWYGCDEELVASLYYRSLGASSYYGFFTGPRFARLHGTSGW
SPAVGDRNPWLQIDLMKKHKIRAVATQGSFNSWDWVTRYMLLYGDRIDSWTPFYQRGHNS
TFFGNVNESAVVRHDLHYHITARYIRIVPLAWNPRGKIGLRLGLYGCPYKSDVLYFDGDD
AISYRFPKGVSRTLWDVIAFSFKTEEKEGLLLHSEGIQGDYVTLELKNAQLWMHMSLGNN
PIHGSPGHTTVFAGGVLNDLHWHYLRLDRFGRDVNLTLDGEVQRILLNGDFEKLNLDTEM
FIGGLVRARQKNLAYRENFRGCIENVIFNRVNIADLAVRGHSRISSEGKVAFRCLDPVPH
PINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTGLLLFSSLSDGLGHVELMLSDGQVNV
SIAQPGRKKLQFAAGYRLNDGFWHEVNFAAQENTAVISIDDVAGAEFRVSHPLQIRTGIS
YFFGGCPKPASLWGCHSNQTAFHGCMELLKVDGQLVNLTLVEFHRLGKFAEILFDTCGIT
DRCFPNPCEHGGRCYQSWDDFICYCELTGYKGEICHQPLYKESCEAYRLSGKTSGNFTID
PDGSGPLKPFVVYCDIRENRAWTVVRHDRQWTTRVTGSSQERPFLGAIQYWNASWEEVSA
LANASQHCEQWLEFSCYNSRLLNTAGGYPFSFWIGRNEEQHFYWGGSQPGIQRCACGLDK
SCVDPTLYCNCDADEPQWRTDKGLLTFVDHLPVTQVVVGDTNRSNSEAQFFLKPLRCYGD
RNSWNTISFHTGASLLFPPIRANYSLDVSFYFKTTADSGVFLENQGGRPCQWRRPYLRLE
LNTSRDIVFAFDVGNGDENLTVHAEDIEFNDDEWHLVRAEINVKLARLRVDHRPWEIRPM
PLQTYIWLEYDRPLTVGSAEHKRRPFLGCLRAMRLNGITLNLEGRANASLGTSPNCTGRC
LHPKLPCFHGGRCVERYSYYTCDCDLTAFEGPYCNHDIGGFFEEGTWVRYNLQSALRSAA
QEFSHMLSRPVPGYEPGYVPGYDTPGYVPGYHGPGYQLPDYPRPGRPVPGYRGPVYNVTG
EEVSFSFSTTSAPAILLYVSSFVQDYMAVLIKEDGTLQLRYQLGTSPYVYPLTTRPVTDG
QSHSINITRVYRSLFIQVDYFPMMEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRY
NTPGFSGCLSGVRFNNVAPLKTHFRAPRPFPREISEALRVQGDLTESNCGAMPHSGFEVP
PELDPWYLPPDFIYYHDDGWVAIIIGFVVTLLLLGLVGLLVLFYLQNHRYKGSYHTHEPK
ATHDYHAAGKTPLPPSTPARAPALQPPAPAPARDQNLPQILEESRSE
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgggcatctcgttgctctgtattctgcttgcagcggtcactggagccagaggctggggc
tggtatggctgtgatgaagaactggtggcctcgctgtattatcgctcgctgggagcctcc
tcctattacggcttcttcactgggccccgcttcgctcggctccacggcacaagtggatgg
tcacctgccgttggggaccggaacccctggctacagattgacttgatgaagaagcataaa
ataagggctgtggccacgcagggctccttcaactcatgggactgggtcacacgctatatg
ctactttatggcgaccgcatagacagctggacacccttttaccagcgagggcacaattcg
acattcttcgggaacgtgaatgagtccgcagtggttcggcatgacctccactaccatata
actgccaggtacattcggattgttcccttagcctggaacccacgaggcaagattggtctg
agacttggactctatggatgcccttacaaatcagacgtgctatactttgatggggatgat
gctatctcctaccgattccccaagggggtgagccgtaccctatgggatgtcatcgccttc
agttttaagacagaagagaaagaaggacttcttctgcactcagaagggattcagggtgac
tatgtgactctggagctcaagaatgctcaactgtggatgcacatgagcctcggtaacaac
cctatccatggcagcccaggccacaccactgtattcgccggtggagtcctcaatgacttg
cactggcactacttgaggttggaccgctttggtagagatgtcaatttgactttggatggc
gaagtccagcgaattctgctcaatggggattttgagaagctaaatctagacacagagatg
tttattggaggcctggtcagggctagacagaagaatctcgcttaccgggaaaattttcgg
ggctgcatagaaaatgtaatctttaaccgagtcaacatcgccgacctggctgttcggggt
cattctcggatctcttctgagggcaaggtcgctttccggtgcttggatccagtcccgcac
cctatcaatttcggcggcccacacaactttgtgcaggtgcccggcttcccccgtcgcggc
cgcctcgctgtttcctttcgttttcggacctgggatcttacggggctgctgctgttctcg
agcctgtcagacgggctgggccacgtggagctgatgctcagtgacggccaggtcaatgtg
tccattgctcagcctgggcgcaagaagctacagtttgctgcgggataccgcctcaatgat
gggttctggcatgaggtgaattttgcagcacaggaaaacacagcagtcatcagtatagat
gatgttgctggggctgaattccgagtctcacatccccttcagatccgtactgggatttca
tatttctttgggggttgtcctaaaccagccagcctctggggctgccattccaaccagaca
gcgttccacggctgcatggagctgctcaaggtggacgggcagctagtcaacctgaccctg
gtagagttccatcggctgggaaaatttgctgagatcctgttcgacacatgcggcatcact
gacaggtgcttcccaaacccgtgcgaacatgggggtcgttgctatcagtcctgggatgac
ttcatctgctactgtgaactgacaggctacaagggagagatctgccaccagcccctgtac
aaagagtcatgtgaagcttacaggctcagtgggaagacctccgggaatttcaccattgac
cctgatggcagtggccccctaaagccatttgtggtctactgtgacatccgagagaaccgg
gcgtggacagtggtgcgccatgatcgacagtggacgactcgggtgacaggctcaagtcag
gagcgcccattcctgggggctatccagtactggaatgcctcctgggaggaggtcagtgca
ctggccaacgcctctcaacattgtgagcagtggcttgagttttcttgttacaattcccgg
ctgctcaacactgcaggcggttaccccttcagcttctggatcggtcggaatgaggagcag
catttttactggggggggtctcagcctgggatccagcgctgtgcctgtggcctagataag
agctgtgtggatcccaccttgtactgcaactgtgatgctgatgagccccagtggagaaca
gacaaaggactgctgacctttgtggaccacctccctgtcacacaggtggttgttggggat
acgaaccgatccaattcagaggcccagttcttcctgaagcctcttcgttgctatggtgac
cggaactcgtggaataccatctccttccacactggtgcttcgctgctcttccctcccatc
cgcgccaactacagtctggatgtctctttctatttcaagaccacggctgactcaggtgtc
ttcctagaaaatcagggaggccgcccttgccagtggcgacgaccataccttcgactagaa
ctcaacacttctcgagatatagtttttgcctttgatgtgggaaatggtgatgaaaacctt
acagtccatgctgaggacatagaatttaatgatgatgagtggcacctggtccgggctgag
atcaatgtgaaactggcccggctccgagttgaccatcgaccttgggagattcgaccgatg
ccccttcagacctacatctggctcgagtacgaccggcctcttactgttggctctgcagag
cacaagaggcgccccttcctgggctgcttgcgggcaatgcgcctaaacggaatcaccttg
aacctggagggccgggccaacgcctctctgggcacctcgcccaactgcacgggccgctgt
ctccacccgaagctcccctgttttcacggtggccggtgtgtggagcggtacagctactac
acgtgcgactgtgatctcacagccttcgaagggccctactgcaaccacgacatcggcggg
ttctttgaggaaggcacctgggtgcgctataacctgcagtccgcgcttcgctccgccgct
caggagttctcgcacatgctgagccgcccggtgcctggttacgagcccggctacgtcccc
ggctacgacaccccaggctacgtgcctggatatcacggccctggctaccagctccccgac
tacccccggcccggtcggcccgtgcctggctatcgggggccggtctacaacgtcactggg
gaggaggtctctttcagtttcagcaccacctcggccccagccatcctcctctacgtgagc
tcctttgtccaagattacatggccgtgctcatcaaggaggatgggaccctgcagctgcgt
taccagttgggtactagcccttatgtgtatccactgaccacccggcctgtcactgatggt
caatcccacagcatcaacatcacccgtgtctatagaagcctctttatccaggtggattat
ttcccaatgatggagcagaaattctcattgcttgtggacagccagttggactcaccaaag
gcattgtacttggggcgtgttatggagacgggagtgattgacccggagatccagcgctac
aacacgccaggattttcaggttgcctctcaggtgttcgcttcaacaacgtggccccgctc
aagacccacttccgggccccccgaccgtttccccgtgagatttctgaagcccttcgtgtc
cagggggacctgactgagtctaactgtggtgctatgccccattctggctttgaggtgcca
cctgagcttgacccttggtacctgccaccagacttcatctactatcacgatgatggctgg
gtcgctatcatcataggctttgtggtgactctcttgctgctggggctggtgggacttctg
gtcctattctacttgcaaaatcatcgatacaagggttcttaccatacccacgagcccaag
gccactcatgattaccatgctgctggcaagacccctttacccccttctactcctgcccgg
gctcctgccctgcagcctccagcccctgcacctgccagggaccagaacctaccccagatc
ctggaagagtctcgttctgaatga
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integrated database retrieval system