Sarcophilus harrisii (Tasmanian devil): 100917447
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Entry
100917447 CDS
T02286
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03082
ATP-dependent chromatin remodeling
shr04714
Thermogenesis
shr05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100917447 (SMARCD3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100917447 (SMARCD3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100917447 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100917447 (SMARCD3)
03036 Chromosome and associated proteins [BR:
shr03036
]
100917447 (SMARCD3)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100917447 (SMARCD3)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100917447 (SMARCD3)
PBAF complex
100917447 (SMARCD3)
GBAF(ncBAF) complex
100917447 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DUF5529
Motif
Other DBs
NCBI-GeneID:
100917447
NCBI-ProteinID:
XP_031795312
Ensembl:
ENSSHAG00000010902
UniProt:
G3WBD4
LinkDB
All DBs
Position
5:complement(200972393..201015101)
Genome browser
AA seq
483 aa
AA seq
DB search
MAADEVTGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGL
APAGMEPARKRAAPPPGQSQAQSQGQPVPTAPTRSRSAKRRKMADKILPQRIRELVPESQ
AYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIA
SWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQV
KRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSH
DKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDI
DVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYV
QDLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQSLGV
RNT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgaagttactggaggggcgcgcaaagccacgaaaagcaaactttttgag
tttctggtccatggggtgcgccccgggatgccgtctggagcccggatgccccatcagggg
gcgcccatgggtcccccgggttccccgtacatgggcagccccgccgttcggcctggcctg
gccccggccggaatggagccagcccgcaagcgagcagcacccccacccgggcagagccag
gcgcagagtcagggccagccagtgcccacagcccctaccaggagccgcagtgccaagagg
aggaagatggctgacaaaatcctccctcaaaggatccgagagctggtccccgagtcccag
gcttacatggacctgctggcttttgagaggaagctggaccagaccatcatgcggaagcgg
gtggacatccaagaagccctgaagaggccgatgaagcaaaagcggaagctgcgcctctac
atctccaacacgtttaaccctgcgaagccggacgccgaggactcggacggcagcatcgcc
tcctgggagctgcgggtggaggggaagctgctggatgaccccagcaagcagaagcggaag
ttttcttccttctttaagagtttggtcattgagctggacaaagacctctatggcccagac
aaccacctggtggagtggcaccggacccccacgacacaggagacagatggcttccaggta
aagcgcccaggggacctgagcgtgcgctgtaccttactccttatgttggactaccagccc
ccccagttcaaactggatcctcgcctggcccgcctgctggggctccacacccagagccgc
tctgccatcgtccaggccctgtggcagtacgtaaagacaaaccggctgcaggattctcat
gacaaggagtacatcaatggggacaagtacttccagcagatctttgactgtcctcggctg
aaattctctgaaatcccccagcgcctcacagccctgcttctgcccccagacccaattgta
atcaaccatgtcatcagtgtggacccctcagaccagaagaagacggcgtgttatgacatt
gatgtggaggtggaagagccactgaagggtcagatgagcagcttccttctgtccacagcc
aaccagcaggagatcagtgccctggacagtaagatccatgagaccattgagtctataaac
cagctcaagattcagagggacttcatgctgagtttctccagagaccccaaaggctacgtc
caagaccttctccgctcccagagtcgggaccttaaggtaatgaccgatgtagcaggaaat
cccgaggaggaacgtcgggcagagttctaccaccagccctggtcccaggaagctgtcagc
cgctacttctactgcaagatccaacagcgcaggcaggaactggagcaatccttgggtgta
cgcaacacctag
DBGET
integrated database retrieval system
