Sarcophilus harrisii (Tasmanian devil): 100917531
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Entry
100917531 CDS
T02286
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100917531 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
100917531 (HERC3)
Enzymes [BR:
shr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100917531 (HERC3)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
HECT type E3
100917531 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
WD40_RLD
HECT
RCC1_2
Alsin_RLD
Motif
Other DBs
NCBI-GeneID:
100917531
NCBI-ProteinID:
XP_031798610
Ensembl:
ENSSHAG00000000708
LinkDB
All DBs
Position
6:complement(148871082..148994902)
Genome browser
AA seq
1052 aa
AA seq
DB search
MLCWGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCG
SNTKGQLGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHT
TTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQA
SPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLL
RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQI
ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRADSF
KYHIVKHIFSGGDQTFVLCSKYENSSPADDFRIMNQAQYTSLINDETIAIWRQKLSEHSN
SNSINSGVLQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSML
LEQILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTLPLAMAILRLDA
NPSKVLDNWWCQVCPRYFLKLVDLYKSAVVYLLSGRKTLLIPVLFSSYITAALKLLEKLH
KVNQKVKHVEYDKFYIPEISHLVDIQEDYLMWFLHQAGMKVRPSIMQDAVTLCSYPFVFD
AQAKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRE
LSIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFS
DTCFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKPGLEDLKELSPTEGRSL
QQLLDYPGEDVEEVFCLNFTICRESYGVVEEKKLIPGGDKMTVQKDNRQEFVDAYVNYVF
HLSIHEWYAAFSSGFLKVCGGKVLELFQPSELRAMIVGNSNYNWEELEESTIYKGDYSPS
HPTVKMFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMSSLRIIIQSTTSGEEYLPVAHTC
YNLLDLPKYSSKEILNIRLTQAIDHYEGFSLA
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgttatgttggggatattggtctttgggccatcctggtggtattagcagcaatctccaa
ggaattgtgactgagccacaagcatatggatttatttctgacagaagcatcaaagaagtg
gcttgtggaggcaaccactcaatttttttactggaggatggggaagtttatacatgtggt
tcgaacaccaaaggacaactaggccatgaaagagaaggaaataagccagagcaaattggg
gctttagcagatcagcacatagtccacgttgcctgtggcgagtctcatagcttggccctt
agtgaccagggacagctcttctcttggggtgcaggtagtgatggacaacttggacataca
actactgaagattctgttgcaatacccaggttaataaagaaactcaatcaacaaatgata
ttgcaggtttcctgtggcaactggcactgcatggctcttgcagctgatgggcagttcttc
acttggggacagaaccgccatgggcagttgggtctggggaaagaattcccttcccaagct
agtccccagagagtgaaatccttagaggggatccccctggctcaggttgctgctggaggg
gcacacagctttgccttgtctctctctggagctgtatttggatggggaaggaacaatgct
ggtcagctgggactcagtgatgaaacagatcgtcaatctccttgtcatgtgaaactttta
cgaactcaaaaagttgtttatattagttgtggagaagaacatacagcagtgctcacaaag
agtggaggagtgttcacttttggtgctggttcctttggacagcttggacatgactccatg
aatgatgaggttaatccaagaagggttctagaattaatgggcagtgaagtaactcagatt
gcttgtggcagacagcacactctagcctttgtgccttcctcggggctcatctatgcattt
ggctgtggagcaagaggccagttaggaactggacatacatgtaatgtaaagtgcccatct
cctgtaaagggtcactgggctgctcacaatggccaactttcatctagagctgattccttt
aaatatcacattgttaaacatatcttctcaggaggagaccaaacttttgtactttgctcc
aaatacgagaattcctctcctgcagatgacttcaggattatgaatcaagcacaatatacc
agtttaataaatgatgaaactatagctatttggagacaaaaactatcagagcatagcaac
tccaattcaatcaacagtggtgttctgcaaatattgtcttcagctgcctgttggaatgga
agttttcttgaaaaaaaaattgatgagcattttaaaactagtcccaaaattccagggatt
gacctcaattctaccagagtgttatttgagaagctaatgaactctcagcactcgatgctt
ctagaacagatcttaaaaagctttgaaagtttcctgattccacagttgtccagttcacca
ccagatgttgaagcaatgagaatctatttaatacttcctgaattccctctacttcaggat
tctaaatattatataacattaacccttcccctggcaatggctattctacgactggatgca
aaccctagtaaagtcttagataactggtggtgtcaggtgtgcccaagatatttcttgaag
ctagtagacctttataaaagtgcagtagtttatctcctgagtggaagaaaaacattgttg
attcctgttctgtttagcagttatataacagcagcactcaagctattggaaaaactgcat
aaggtaaaccagaaagtgaaacatgtggaatatgacaagttttacatacctgaaatttcc
catcttgtggacattcaggaagactatcttatgtggttcttacatcaagcaggaatgaaa
gttagaccatctataatgcaggatgctgtgactctctgttcctatccatttgtctttgat
gctcaagctaagaccaaaatgttgcagacagatgctgaactgcagatgcaggtcgctatc
aatggagcaaatttgcagaatgtgttcatgctcctcacattggagcctctgctggccaga
agcccattccttgtccttcatgttcgcaggagcaaccttgttggagatgccctaagagag
ctgagtattcactccgacattgatttgaaaaagcctctgaaagtaatctttgatggtgaa
gaagcagtggatgctggtggtgtcacaaaagaattcttccttttgctcctgaaggaactt
ttgaatcctatctatggaatgtttacttattatcaagattcaaacctcttatggttttct
gacacatgttttgtagagcacaactggtttcacctgatcggtataatctgtggactagct
atctacaacttcactgtggtagatcttcactttccactggctctctacaaaaaattacta
aatgtaaaacctggcttggaagatttaaaagagctatcacctactgaaggaaggagtctt
cagcagcttcttgattacccaggggaagatgtagaagaggtgttctgtctcaacttcaca
atatgcagagaaagttatggagtagttgaagagaagaagcttatacctggaggagacaaa
atgactgttcagaaagacaacaggcaggaatttgtggatgcttatgtcaactatgtcttc
cacttgtcaatccatgaatggtatgcagccttttcgagtggttttctgaaggtgtgtgga
ggcaaagtattggaactcttccagccttcagaactcagggccatgattgtgggaaacagc
aattataactgggaagagttggaagagagcacaatctataaaggtgattattcaccttca
catcccacagtgaaaatgttttgggaaacttttcatgaatttccactggaaaagaagaag
aaatttcttttatttctgacaggcagtgaccggatccctatctatggaatgtcaagcctg
cgaatcatcatccagtccacaaccagtggggaggaatatttgcctgtggctcatacttgc
tacaatcttctagatctacccaaatacagcagcaaggagatcctgaatatacgcctgaca
caggcgattgaccactatgagggatttagtttagcctga
DBGET
integrated database retrieval system
