Sarcophilus harrisii (Tasmanian devil): 100917586 Help Entry 100917586         CDS       T02286                                  Symbol COL4A4 Name (RefSeq) collagen alpha-4(IV) chain   KO K06237   collagen type IV alpha Organism shr  Sarcophilus harrisii (Tasmanian devil) Pathway shr04151   PI3K-Akt signaling pathway shr04382   Cornified envelope formation shr04510   Focal adhesion shr04512   ECM-receptor interaction shr04820   Cytoskeleton in muscle cells shr04926   Relaxin signaling pathway shr04933   AGE-RAGE signaling pathway in diabetic complications shr04974   Protein digestion and absorption shr05146   Amoebiasis shr05165   Human papillomavirus infection shr05200   Pathways in cancer shr05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:shr00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     100917586 (COL4A4)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100917586 (COL4A4)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     100917586 (COL4A4)   09142 Cell motility    04820 Cytoskeleton in muscle cells     100917586 (COL4A4)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     100917586 (COL4A4)   09154 Digestive system    04974 Protein digestion and absorption     100917586 (COL4A4)   09158 Development and regeneration    04382 Cornified envelope formation     100917586 (COL4A4)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     100917586 (COL4A4)   09162 Cancer: specific types    05222 Small cell lung cancer     100917586 (COL4A4)   09172 Infectious disease: viral    05165 Human papillomavirus infection     100917586 (COL4A4)   09174 Infectious disease: parasitic    05146 Amoebiasis     100917586 (COL4A4)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     100917586 (COL4A4)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:shr04147]     100917586 (COL4A4)    00536 Glycosaminoglycan binding proteins [BR:shr00536]     100917586 (COL4A4) Exosome [BR:shr04147]  Exosomal proteins   Exosomal proteins of other cancer cells    100917586 (COL4A4) Glycosaminoglycan binding proteins [BR:shr00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100917586 (COL4A4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  100917586 NCBI-ProteinID:  XP_031813802 Ensembl:  ENSSHAG00000013055 UniProt:  G3WIR0 LinkDB All DBs Position 3:54245836..54387063 Genome browser AA seq 1687 aa AA seqDB search MALIKCSFRWLKQFVMGPWSLVIILFSIQQVYGGGKKYSGPCGGRDCSVCQCFPEKGSRG QPGHLGPQGPIGDLGPPGPIGLPGEKGMKGDSGFPGPVGNQGDKGPTGVPGFPGLDGIPG YPGPPGPRGKPGIDGRNGSRGDPGFPGERGVPGPEGPAGLQGPAGEKGNSVYISGAIKGL PGDRGDPGSPGLPGPRGANGSMGEIGFPGIPGSRGPPGYPGRPGDQGNPGVGVKGQIGDP GEVGLQGFPGPTLLIEPPGSCLIKGEKGMKGMPGVIGPSGPYGVKGEPGIGVKGEKGTSG FPGPQGGPGSHGLPGFPGVKGELGASGVRGQLGVFGTKGDPGERGKPGPPGVLTTPPVPC KGPPGDPGFPGLYGEKGSVGLPGPAGPPGRPGEVRIGMTGPPGPPGLPGLQGLQGEAGNP GRGDSPAGKPGTPGHPGIPGVPGQQGQPGSDVIHCSTGPPGPQGVKGQSGPPGRRGTKGE KGNEGLCSCCPGPLGLPGAPGPHGLQGRKGEVGLPGRVGEKGDPGSPGAQGSPGPPGIPG TSGLTGPKGEKGDMVIARIKGRKGEKGHDGPPGYPGQEGVPGQNGLYGKRGEPGLPGSRG GAIPGAEGSPGAPGSPGRMGPMGPPGLGFPGPEGVRGGPGKTGHPGVKGASGSKGQKGDT YPCPSPYPGSPGAPGIPGAPGLKGFPGPPGEAGQPGFDGQKGQQGKSGISGILGPPGFRG DPGESGPEGVEGLAPIGPPGPPGLPGINGQKGMPGDSAYGPPGLPGKMGPPGLPGLKGLR GDPGFPGATGATGVPGFPGIKGIQGRKGNAGPPGNPGLPGHGCRGVPGLPGQPGLPGSPG IPGFDGLKGHQGDRGPPGPAGMKGLPGIPGLPGSPGPPGPQGDPGYYGDNGSPGAPGPKG AQGLPGIPGFPGERGRKGQIGLPGRKGDPGEEGLCGFPGEPGEPGSKGEKGYPGDQGDIS IVSRKGEKGDLGPPGRYGFPGEKGDKGSPGIPGIKGFPGRDGLPGLQRGEPGKSGHPGLP GPPGLPGPPGLRGIIGFPGIPGDKGELGLPGLPGLPGPHGTRGSKGNQGDDAASLFGPPG PKGDPGIPGCPGYFGEQGDPGFPGPPGSSGLPGREGSAGYPGPPGFPGAPGIPGLKGYPG EAGDPGPPGVRGDPGPPGPKGIKGSPGSPGLDGLPGLKGQKGLKGSSGLNEVGPPGQMGL PGLKGKKGEPGRPGASCPGFPGDRGPLGPPGIPGLPGLPGPVGKTPEDEILPPGPLGDQG PPGPDGPKGPPGPPGFPCSYDILKGDPGDDGQPGLPGPQGPPGPPGAKGFPGCEGKDGQK GPMGYPGPPGPPGFPGPPGDKGLQGPPGRPGPTGPPGCQGEPGPPADTSSCPKIPGLPGV PGPRGPEGKMGHPGQRGLPGSPGHKGERGVDGQRGLDGGPGPPGPPGSKGDPGEDGCGGA PGPPGPTGDPGPKGSGTRYLNGFLLVLHSQTDKEPSCPEGMSKLWTGYSLLYLEGQEKAH NQDLGLAGSCLPMFSTMPFAYCNINQVCHYARRNDKSYWLSSAAPLPMMPLSEDEIQAYI SRCVVCEAPGQAMAVHSQDQAIPPCPPTWRSLWIGYSFLMHTGAGDQGGGQSLTSPGSCL EDFRAAPFIECQGRQGTCHFFANEYSFWLTTVPPDSLLSSAPVPDTLKQERAQRQKISRC QVCMKYS NT seq 5064 nt NT seq  +upstreamnt  +downstreamnt atggcattaataaagtgttctttcagatggcttaaacaatttgtaatgggtccttggtcg cttgtaattattcttttttctatacaacaagtttacgggggtggaaaaaagtactctggt ccttgtggaggacgagattgttcagtctgtcagtgttttcctgaaaaaggatctcggggc caacctggtcatctagggccccaaggccccattggagatttaggacctcctgggcccatt gggttaccaggagagaaaggaatgaaaggagacagtggatttcctggaccagtgggaaat caaggagataagggcccaacaggagtacctggtttcccaggcttggatggcatacctggg tatccaggacctccaggaccaagaggcaaacctggcattgatggccgcaatggttcaaga ggagatccagggtttccaggagagagaggagtaccaggaccagaaggtccagctggtctt caggggccagcaggagaaaaagggaattcagtgtatatttcaggtgctattaaaggcctc ccgggagatcgaggtgatccaggatctccaggtttacctggacctcgaggggcaaatgga tcaatgggtgaaataggatttccagggataccaggttctagaggacctccaggctatcct gggaggccaggtgatcagggcaatccaggtgttggagtaaaaggccaaattggagatccg ggtgaagttggtcttcaaggttttccaggaccaaccttactgattgaacctcctggttca tgtctcattaaaggagaaaaggggatgaaaggaatgcccggtgtcattggtccctctgga ccatatggagtcaagggtgaacctggtattggagtgaagggtgaaaaaggtacttctgga ttcccaggacctcagggtggccctggttcccatggacttccaggttttccaggagtaaag ggagaacttggagcaagtggtgtccgtgggcagcttggagtttttggcactaagggagat cctggagagcgtggaaagccaggaccaccaggtgttttgacaaccccacctgttccttgc aaaggacctccaggggacccaggattcccaggactctatggagaaaaggggtcagtgggg ttgcctggtccagcaggaccccctggcagaccaggggaagtcagaataggaatgacagga ccccctgggcctccagggttgccaggtttgcaaggtcttcaaggtgaagctggaaatcct ggaagaggtgattcacctgcaggaaaaccagggactccaggacatccaggcataccagga gtcccagggcaacaaggtcaacctggatcagatgtcatacattgtagcactggccctcct ggaccacaaggagtgaaaggtcaatcaggacccccaggaagaagaggcacaaaaggagaa aaaggaaatgaagggctgtgttcatgttgcccaggtcccctgggccttcctggtgctcca gggccacatggtcttcagggtaggaaaggagaagtgggtctacctgggagagtaggagaa aaaggtgacccaggctctcctggtgctcaaggatccccaggacctccaggaatacctggt acctcggggctaactggtcctaaaggagaaaagggtgatatggttatagcaagaatcaaa ggaagaaaaggagaaaagggtcatgatgggcctcctggatatccagggcaggaaggcgtt cctggtcagaatggactgtatggaaaaagaggcgagccaggtctcccaggcagtcgtggc ggagcaattccaggtgcagaaggatctcctggagcaccaggatctcctgggagaatggga ccaatggggcctccaggactgggatttcctggcccagaaggggtgagaggtggaccaggg aaaactggtcaccctggtgtgaagggagcatcaggttccaagggtcagaaaggtgacacc tatccttgtccttccccctatccagggagccctggagctccagggattccaggtgctcca ggtctgaagggatttccggggcctccaggtgaagctgggcaaccaggatttgatggacag aagggccaacaaggcaaatcaggaatatcaggaatactgggaccacctggttttcgaggt gaccctggagagtcaggtcctgaaggtgtagaggggttggcccctattggtcctccaggc cctccagggttaccaggaatcaatggccaaaaaggaatgccaggtgattctgcttatgga ccaccggggcttccaggaaagatgggccctccaggattgcctgggcttaaagggctcaga ggggatccaggatttcctggagctacaggggcaactggtgttccaggattcccaggcatt aaaggaattcaaggcagaaaagggaatgctggacctcctggtaacccaggtttgccaggc catggatgccgaggtgttccagggttgccagggcaacctggactccctggatcaccagga attccagggtttgatggcttgaaaggtcatcaaggagatagaggtcctcctggaccagct ggaatgaaaggccttccaggaatcccaggacttccaggctcacctggacccccaggacca caaggggatccaggctactatggagataatggctcaccgggtgccccaggtccaaaaggg gcccaaggcctgccaggtatcccaggctttccaggagagcgaggaaggaaaggacaaatc ggacttccaggtagaaagggtgacccaggagaagagggtctttgtggctttccaggagaa ccaggagagccaggctctaaaggagaaaaaggctatccaggagatcaaggggatatttcc atagtttcaagaaagggagaaaaaggtgatcttgggccacctggtagatatggattccca ggagaaaaaggagataaagggagtcctggaatcccaggaataaaaggatttccaggaaga gatgggctacctggattacaaagaggagaacctggcaagagtggacatccaggacttcca ggccccccaggcctcccaggacctccagggctcagaggaataattggtttcccaggtatt ccaggggacaagggtgagctgggcttaccaggcttgcctggactcccaggacctcatggg acaagaggatctaaaggaaatcaaggtgatgatgcagcaagtctgtttgggccacctgga ccaaagggagatccgggtatccctggatgtccaggatattttggagaacaaggagatcca ggttttccaggccctccaggatctagtggactaccaggaagggaaggatctgctggatac ccaggacctccaggatttccaggtgctccagggattcccgggctgaaagggtatcctggg gaagcaggtgacccagggcctccaggggtcagaggcgatccaggaccaccagggcccaag ggaataaaaggttcccctggatcaccaggattggatggcttgcctggactcaagggtcag aaaggattaaagggtagttcaggcttaaatgaagttggtccaccaggccaaatgggactg cctggacttaaagggaagaaaggggagcctggaagacctggagcttcttgtccaggtttt cctggagacagaggtcctctaggtcctccaggcataccaggattgcctggacttcctggt cctgtgggaaaaactcctgaagatgaaattcttccccctggtcctctgggagatcaaggt ccccctggccctgatggaccaaaaggtccacctggaccaccaggttttccatgcagttat gatatcctgaaaggagatccaggtgatgatggtcaaccaggtctacctggaccacaaggt ccacccggacctccaggagccaaaggctttccaggatgtgaagggaaagatggccagaaa ggtccgatggggtaccctgggcctccaggcccacctggatttcctggcccacctggagat aaaggtttgcaaggaccccctgggagacctggccccactggtcctccaggttgtcaaggt gaacctggcccacctgcagatacctcttcatgccccaaaatcccaggacttccgggggtt ccaggcccaagaggaccagaagggaagatgggacacccagggcaacgaggtcttccaggc tcaccaggacacaaaggcgagcgtggtgtggatggccaaaggggtttggatggtggtcct ggtcctccaggaccacctggaagtaaaggagacccaggagaagacggctgtggaggggcg ccaggtccccctggcccaactggggatccaggacccaaaggttctggaactagatacctt aatggattcctactggttctccacagtcagacagacaaagaaccctcttgtcctgaggga atgtccaagctgtggactggatatagcctgttgtatctggaaggccaggagaaagcacat aaccaagacctaggtctggctggatcctgccttcccatgttcagcaccatgccatttgcc tattgcaacatcaaccaagtctgccattacgccagaaggaatgacaaatcctattggctg tcgagtgctgctcctctacccatgatgcccctctctgaagacgaaatacaagcttacatc agccggtgtgtggtgtgtgaggctccaggtcaggcgatggctgtgcacagtcaggatcag gccatccctccatgcccacccacctggagaagcctttggatagggtattcattcctaatg cacacaggggcgggcgatcaaggcgggggccagtccctcacctcacctggaagctgcctg gaagacttcagagccgcgccattcatcgagtgccaaggacggcaggggacttgtcacttt ttcgctaatgaatacagcttctggctaaccacggtgccaccagactcgctgctctcctca gctcctgtgccagacaccttaaaacaggaacgggcccagcgccagaagatcagcagatgc caagtctgcatgaagtacagctaa

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