Sarcophilus harrisii (Tasmanian devil): 100917613
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Entry
100917613 CDS
T02286
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
shr03037
]
100917613 (NPHP3)
Cilium and associated proteins [BR:
shr03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
100917613 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
TPR_17
TPR_19
NPHP3_N
MIT
KAP_NTPase
TPR_11
AAA_22
AAA_16
DUF2225
AAA_19
14-3-3
NACHT
T2SSE
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
100917613
NCBI-ProteinID:
XP_031795976
Ensembl:
ENSSHAG00000015197
LinkDB
All DBs
Position
5:250644354..250688659
Genome browser
AA seq
1353 aa
AA seq
DB search
MGTASSLVSPAGGEVIEDTYGGGGGEACEIPVEVKPKARLLRGSFRRAGAAGAGAGAAAG
AGAGARGAGGLLGASFKSTGSSVPELEYAAAECERLKKEYEIFRVSKNQELLAMGRREAK
LDTENKRLRAELQALQKTYQKILREKESALEAKYQAMERAATFEQDRDKVKRQFKIFRET
KENEIQDLLRAKRELEAKLQRLQAQGIQVFDPEESDSDDNCTDVTATGTQCDYWRGGALG
REPSIGSMMQLQQSHRGPEFAHSSIDVEGPFANVNRDDWDAAVASLLQVTPLFSHSLWSN
TVRCYLINTDETQPEMDIFLRDYSPKLQRMCETIGYFFHAIYFPIDNGNHYFNVRKWEIE
KSSLVILFIHLTLPSCLLEDCEEAFLKNSEGKPRLIYHRLEDGQVSSDSVQRLIEQVSYL
NKANKAKIIDHQGEPAEGVYKTYNYVEKIIKQDILGFENTEQEMKDLDNEEDSTIPEEED
YGDVLWDIHDEQEQMEAFQQASNSAYDLGFEKYYQRLNDLVAAAAPIPPLLVSGGPGSGK
SLLLSKWIQLQQKHSPNTLILYHFVGRPMSTSSESASIIKRLTLKIEIPSACYLSLNKSC
VFLQLMQHSWSVSGLTLDPGKLLEEFPRWLEKLSARHQGSIIIIIDSIDQVQQVEKHMKW
LIDPLPVNVRVIVSVNVETCPPAWRLWPTLHLDPLNSKDAKALITAECSCVNIKLTKDQE
KKLERHCRSATTCNALYVTLLCKMITHRAGKAGSIDEILQQCFQCQDTVSLYRLVLRSIQ
ESMENDKERDLMKEILCLVTVSHNGVSESELMELYPDLSWPVLTSLIHSLHKMCLLTYGC
GLLKFQHLQAWETVRLEYMEESQDISTYREKLIEYFTSQLSKARVTWRCADELPWLFQQQ
GNRQKLHECLLNLFVSQNLYKRGHFAELLSYWQLVGRDKGSMAAEYFDSLKQYEKNCEGE
ESMMSLANLYETLGRFLKDLGLLSQAIVPLQRSLEIRETALDPDHPRVAQSLHQLASVYV
QWKKFGNAEQLYKQALEILENAYGSEHPLIARELDALATLYQKQNKYEQAEHLRKKSFKI
RQKVARRKGNLYGFALLRRRALQLEELTLSKDTPDNARTLNELGVLYYLQNNLEAADLFL
KRSLDMRERVLGPDHPDCAQSLNNLAALYNEKQQYAEAEELYERALDIRRRALAPDHPSL
AYTGKHLAILYKKLGKLDKAVPLYELAVEIRQKSFGPKHPSVATALVNLAVLYSQMKKPI
EALPLYERALKIYEDSLGRMHPRVGETLKNLAVLSYEGGDFEKAAELYKRAMDIKEAETS
LVGGNALSRHSSSGDTFSLKTLSPNVFLLHGQR
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgcctcgtccctggttagccccgctggcggggaggtgatcgaggacacgtac
gggggcggcgggggcgaagcgtgcgagatcccggtggaagtgaagcccaaggcccgcctg
ctgcgcggctcgttccgccgagccggggccgcgggggccggggccggcgcggcggccggg
gccggggccggggcgcgcggcgcgggcgggctgctcggggccagcttcaagtccacgggc
tcgtcggtgcccgagctggagtacgcggcggccgagtgcgagcggctgaagaaggagtac
gagatcttccgggtcagcaagaaccaggagctgctggccatgggccgccgggaggccaag
ctggacacggagaacaagcggctgcgggccgagcttcaggcacttcagaaaacttatcag
aagatacttcgagaaaaggaaagtgctttagaagctaaatatcaagctatggagagagca
gcaacatttgaacaagatcgagataaagttaaaagacaattcaagatttttcgggaaact
aaggaaaatgaaatccaggacttgttaagagccaagcgagaactggaggccaaacttcag
agactccaggctcaaggcattcaggtctttgatcccgaggagtctgattctgatgacaat
tgcacagatgtcactgctactggaactcaatgtgactactggcgtggtggtgccttgggg
agggagccctccataggcagtatgatgcagcttcaacagtctcacaggggacctgagttt
gctcatagttccatagatgtagaaggaccatttgcaaatgttaaccgagatgactgggat
gctgctgtggctagtttactacaagttactccactgttctcacattctttgtggagtaat
acagtcagatgttacctcatcaacactgatgaaacacagcccgaaatggacatttttttg
agggactattcacccaaactccaaaggatgtgtgagacaataggatacttcttccatgca
atttattttccaatagataatggaaatcattatttcaatgtaagaaaatgggaaattgag
aagagttcattagttattttgtttattcatttaactttgccaagctgtttgttggaggac
tgtgaagaggcatttttgaaaaactctgaaggaaagcctcgattgatctatcatcgcttg
gaggatggccaagtcagctctgactcggtccagcggctgattgaacaagtttcttacttg
aacaaagctaacaaggccaagattattgaccaccaaggagagcctgcagaaggagtatat
aaaacttataattacgtggaaaaaattattaaacaggatatactgggctttgagaacaca
gaacaagaaatgaaagatttggacaatgaagaggattctaccattccagaagaagaagat
tatggtgacgttttgtgggacatccatgatgaacaagagcaaatggaggcttttcaacaa
gcttcaaattcagcatatgatctgggatttgagaaatattatcagcgcctaaatgacctt
gtggcagcagcagcacccatcccaccccttcttgtgtccggaggaccaggctctgggaaa
tcgcttcttttatctaaatggattcagctgcagcaaaagcattctccaaacaccctaatt
ctgtatcactttgtggggaggcccatgtccaccagctcagagtcagcctcaataattaaa
agactgactttaaagatagaaataccttctgcctgctatctcagcctgaacaaatcatgt
gtcttcttgcagctgatgcagcattcctggtcagtgtctgggctaacactggatcccggt
aaactcctcgaggagtttccacggtggttagaaaagctctctgctcgtcatcaaggcagt
attatcatcattattgattctatagatcaagttcagcaagttgaaaagcacatgaaatgg
ctgatagatcccctgcctgtgaatgtgagagtaattgtgtctgtgaatgtagaaacatgc
cctccggcatggaggttgtggccaacacttcatctggatcctttaaattcaaaagatgca
aaagctcttattactgcagaatgtagctgtgtaaatatcaagttgaccaaagaccaggaa
aagaaactcgagcgacactgtcgatctgctactacctgcaacgccttatatgtcaccctt
ttgtgtaaaatgatcacacacagggctggaaaagcaggcagcatagatgaaatcttgcag
cagtgtttccagtgtcaggatactgtgtccttgtataggctggtactgagatcaattcag
gaatccatggaaaatgataaagaaagggatctaatgaaggagatcctctgcctggtcact
gtcagtcacaatggagtgagtgaatcagaactgatggaactctaccctgacctgtcctgg
ccggtgctgacatccctcattcatagtttgcacaaaatgtgtttattgacgtatggctgt
ggcttactcaagttccagcatctccaggcttgggaaacagtgagattagaatacatggaa
gaaagtcaagatatttctacctatagagaaaagttaattgaatatttcacttcccaacta
agtaaagcccgagtgacctggaggtgtgcggatgagctcccttggcttttccaacaacaa
ggcaacagacagaagttgcacgaatgtctactcaacctctttgtgtctcagaatctttat
aaaagaggacactttgctgaattgctgagctattggcagctcgttgggagagataaggga
tccatggctgccgaatattttgattccttgaagcagtacgagaaaaactgtgaaggagaa
gaaagcatgatgtcgttagctaatctctatgaaaccttgggtcgatttctcaaggacctc
ggccttctcagtcaggctattgttcccttgcagaggtctttagaaatccgagaaacagcc
ctggatccagatcatcctcgagtggcccagtccctccatcagctggcaagtgtttatgta
cagtggaaaaaatttggcaatgccgagcagctctataaacaagccctggaaatcctggag
aatgcttatggttccgaacaccctcttattgcccgggagctagatgcgcttgcaaccttg
tatcagaaacaaaacaaatatgaacaagctgaacatctaaggaaaaagtcctttaagatc
cgacagaaagttgcaaggagaaaaggcaatttgtatggattcgctctcctacgtcgacgg
gctctacagttagaagaacttacattaagcaaagacacaccggataatgctcgaaccctc
aatgagctgggtgttctctattatctgcaaaataatcttgaggccgccgatctgtttctg
aaacgctccttagacatgagggagcgagtcttagggccggaccatcctgactgtgcccag
tctttaaacaacctggctgctctctacaacgagaagcagcagtatgcagaggcggaggaa
ctctatgagcgagccctggacattaggaggcgagcactggcccccgaccacccctcactg
gcatatacagggaagcatctagcgatcctgtacaagaaactggggaaacttgataaggct
gtgcctttatatgaactggctgtagaaatacgtcagaaatcttttggtccaaaacatcct
agtgtggctactgccttggtaaaccttgctgtcctttatagccaaatgaaaaagcctatt
gaagccttaccattgtatgaacgagcgttaaagatttatgaagacagcctgggtcggatg
cacccacgagtaggtgaaacactgaaaaatttggctgtgctgagctatgaaggaggagat
tttgaaaaggctgctgagctctacaagagagcaatggatataaaagaagcagaaacgtct
cttgtcggaggaaatgcgctctcgaggcactcatccagtggagatacatttagtttaaaa
actctttcccccaatgttttccttctccatggacaaaggtag
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integrated database retrieval system
