Sarcophilus harrisii (Tasmanian devil): 100917635
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Entry
100917635 CDS
T02286
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100917635 (TDRD12)
Enzymes [BR:
shr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
100917635 (TDRD12)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100917635 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
100917635
NCBI-ProteinID:
XP_031810241
UniProt:
A0A7N4NFW1
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Position
2:complement(456125319..456182435)
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AA seq
1288 aa
AA seq
DB search
MIEVFILKIEDPGCFWVIIKGCDNFLDHEMEYQKLNIQMNTFYNSIYKDVEKVKPLLLEE
GQACVVYCQELKCWCRAVIKSIMSSADHYLAECFLVDFAKYIPVKSKNIRVAVDAFMQLP
YRAKKFRLYCTKPVTLHIDFCEDNAEIVPAKKWDSAAIQYFQNILKATTQIEAKLCGMEE
DIFDVYLYVTIKNEKVCVNDDLVAKNFACYVTPKEKKIDCPEKATPKSLESPPDKINPAL
ALWPMLLQEKIPEKLEKSVVLKRNGLSLDLSSKKINEKIENIYKEKECISLKEINNITVA
ASAYCPRKGGITIYAEPDVRAESSCQKFNEKQFKLTLKKKYDEKNGCVKLLQFLNPDPLK
TDGIHDMQQLQKSKSSIPQPSVVLRNKIEPCSFETAPLSVDLKKILRKNKFLGPNHTESY
CWPPIARGCDVVVISHHGNDPLLYIPPMLTFLQTGGCYKSLPSRSGPLAVIVCPGWKKAQ
HIFELLEEYGRCSRPLHPMLLIIGLNKEEAQNTKFQRGCEVIITTPHSLLRLLKYHSLLF
LRLCHLIFDEIEVLFFEAGEQMLTILDYFKKTIIIEERESAPHQIVAVGAHWSKHIELLT
KEFMNDPYIVITAMEEAALYGNVQQIVQLCLDCEKTSTLLRMLDFSPSHAQKTLIFTSNV
AEAEIVCKVVESSSIFCLKMHTEIAANFKNVLEQWKKKLSLGSQIVLVLTDDCIPPLAIT
DATCVIHFSFPGSPKIFGGRLYCMSDNFQSLIEQGASSEQGNKRAKSVLLLTERSACCAV
GVLRYLERTDAKIPPELCDFTAGVLEAKEDKKLRRPLCHCLKVSGFCKDKRICPDRHHIN
PEIDMPRKLSDQNLSTTGYVKIIPFYIVNATNYFGRIVDKHKDLYAVLNMEMKEHFKESS
NKMSVEKVEKFSLYGLYEKGVFHRVQVLEMSPKEENCVFFNVHIKFIDEGRTSDTKNHQL
LHLPQRFQNLPPQAVEFIVCRVKPIDNEIEWNPKVTRYIHHKIIGKLHEAKVVLSLGNTV
WVDPMVHLTKLSDLKTSVIEYNVRAEILSMGMGTDNPEHIDQLKKLCQESKMVALQENTF
QTIIAPLTSSKSREDTGGLQNSISDDDRILENSVSLQVNTENSKSEMISESDGDNYIKET
PQEQHKSFHPEIKWFQKDDVVIVKIRLRNVKDQKCKFFRERVVFSAWVGDKFYLADMDLY
ASILKEESKCLIKNEEPIVTLVKEKKESWHNLLKKRNPNVSFDFDHWEECEDISPFSNVV
CSRKILNAGMQISEDMDDSSEDSETESE
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagttttcatactcaagattgaagatcccggatgcttctgggttattataaaa
ggatgtgataactttttagatcatgaaatggaataccaaaagttaaatattcaaatgaat
actttctataatagtatatataaagatgttgaaaaagtaaagccattacttttggaagaa
ggacaggcttgtgtggtttattgtcaggaactgaagtgctggtgtagggcagttattaag
tcaattatgtcctctgcagatcattatttggcagaatgcttcctggtggattttgctaaa
tatattcctgtaaaatcaaaaaacatccgagttgcagtagatgctttcatgcaacttcct
tatagagcaaaaaagtttagactatactgcacaaaaccagtcacgttacatattgacttc
tgtgaagataatgcagaaattgtacctgctaagaaatgggatagtgctgctattcagtac
tttcagaatattctaaaagcaacaacacagattgaagcgaaattatgtggtatggaagaa
gatatttttgatgtttacctttatgtaactataaaaaatgaaaaggtttgtgttaatgat
gatctggttgcaaagaactttgcttgttatgtaacacccaaggaaaagaaaattgattgt
ccagagaaagctacaccaaagagtttggaatcccctccagataaaatcaaccctgcactt
gctctttggccaatgttgttgcaagaaaagattcctgaaaaacttgaaaaaagtgtggtt
ttaaaacgtaatggactttctttagatttatcctctaaaaaaatcaatgagaagatagag
aatatatataaagaaaaggagtgtatctctttaaaagaaataaataacattactgttgca
gcttcagcatactgtcctagaaaaggaggcataactatttatgctgagccagatgtacga
gcagaaagttcttgtcagaagtttaatgaaaaacaattcaaattgacattgaagaagaaa
tatgatgaaaaaaatggctgtgtgaagttgctacaatttttaaatcctgatcctttgaaa
actgatggcattcatgatatgcagcagttgcagaaatccaagtctagcatcccacaacct
tctgttgttcttcgaaataaaattgaaccctgttcatttgaaactgcacctctttcagtg
gatttaaaaaagatacttagaaagaataagtttctaggacccaatcacactgagtcttat
tgctggccaccaatagctcgtggatgtgatgtggttgtcatatctcatcatggaaatgat
cctcttttatatattccaccaatgcttacatttttgcaaacagggggctgctataagtca
ttgccaagtagaagtggaccattagcagtaattgtatgccctgggtggaaaaaagcacaa
catatttttgaactattagaagagtatggtagatgctctagacctcttcatcccatgtta
ttaataattggacttaacaaagaagaagctcaaaatacgaagtttcagaggggatgtgag
gtgattataacaacaccccatagccttttgagacttctgaagtatcatagcttgttattt
cttagactctgtcaccttatttttgatgaaattgaagtgttattcttcgaagctggtgag
caaatgcttactattttagactatttcaagaaaactattataattgaagaaagagaatct
gcacctcatcagattgtagctgttggagctcattggagcaaacatatagaacttttaacc
aaagaatttatgaatgatccttacattgttataacagctatggaagaagctgctctttat
ggaaatgtacagcagatagtacaactttgtctagactgtgaaaaaacttcaacattactt
cggatgcttgatttcagtccaagtcatgctcagaagaccttgatattcacaagtaatgtg
gctgaagcagaaatagtttgtaaggtagtagaaagcagttcaatattttgcttgaaaatg
cacaccgaaattgcagctaattttaaaaatgtattagagcagtggaaaaagaagttaagt
cttggctctcaaattgtattggttttaactgatgactgcatacctcctctggcaataacc
gatgcaacttgtgtgattcattttagttttcctggttctccaaaaatttttggagggcgt
ttatattgcatgtctgataatttccaaagtttaattgaacagggtgcttcttcagaacaa
ggaaataaaagggcaaaatctgtcttgttactgacagaaagaagtgcatgctgtgcagtt
ggtgtattacgttatttggaacgaacagatgctaaaattcctccagagttatgtgatttc
actgcaggcgttttagaagctaaggaagataaaaaactcagaagacctctttgtcattgt
cttaaggtttctggtttttgcaaagataaaaggatatgtccagatcgacatcatattaac
ccagaaatagacatgccaagaaaattatctgaccaaaatctgtcaacaactggatatgtt
aaaataatacctttctatattgtgaatgctacaaactattttgggcgcatagttgataaa
cacaaggatctgtatgcagttcttaatatggaaatgaaggagcattttaaggaatccagt
aataaaatgtctgttgaaaaagttgagaagttttcattgtatggactatatgaaaaggga
gtttttcacagggtacaagttttggaaatgagcccaaaagaggaaaattgtgtctttttt
aatgttcacataaaatttatagatgaaggcaggactagtgatactaaaaatcatcagctg
cttcatctaccccagagattccaaaatctgcctcctcaagctgtagaatttattgtttgt
agagtgaaacctattgacaatgaaatagaatggaacccaaaagtcactagatatattcac
cataaaattataggaaaactacatgaggctaaagtagttctatctttgggaaatacagtt
tgggtcgatccaatggtccatctcaccaagctttcagatttgaaaacttctgtaattgaa
tataatgttcgagctgaaattttatcgatgggaatgggtactgataatccagaacatata
gatcaacttaaaaaactgtgccaagaaagtaaaatggttgcccttcaagagaacacgttc
caaacaataatagctcctttaacatccagtaaaagtagagaggatacaggtggcctgcaa
aactcaatatcagatgatgacagaattttagaaaatagtgtttccttacaagtgaataca
gaaaattcaaagtctgaaatgatatcagaaagtgatggagataattacattaaagaaaca
ccccaagagcagcataaaagtttccaccctgaaataaaatggtttcaaaaagatgatgtt
gtaattgtgaagataaggctaagaaatgtaaaagatcagaaatgtaaattttttagagaa
agggtggttttcagtgcttgggtaggagataaattttacttggctgatatggacttatat
gcaagtatattaaaagaagaatccaaatgtctaattaagaatgaagaacctatagttact
cttgtaaaagagaaaaaagaatcttggcataatttactcaagaaaaggaatcctaacgtg
tcttttgatttcgatcattgggaggaatgtgaagatataagccccttttctaatgttgtg
tgctctagaaagatactcaatgctggtatgcagataagtgaagatatggatgattcttca
gaggacagtgaaactgagagtgaatag
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