Sarcophilus harrisii (Tasmanian devil): 100917795
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Entry
100917795 CDS
T02286
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
100917795 (ZSWIM8)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
100917795 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
100917795
NCBI-ProteinID:
XP_031812294
UniProt:
A0A7N4NZK5
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All DBs
Position
2:complement(612668032..612683114)
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AA seq
1834 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG
GGGGGGRSRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDI
RLYSCLANGSADEFQRGEQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDR
CRVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLI
SELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSENIKK
TLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKR
RDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC
DEMVTLWRLAVLDPSISPQRRRDLCVQLRQWHLKVIENVKRGQHKKALERLFPGFRPAVE
ACDFSWEEAYPLPGVTYSGSDRKLALCWARSLPSRAGPPRSGGPDEAGDRPRPSPPEPSV
RPKEPGAKRKGSGEGVPQSQRGPRRPSAEGGEKSAHKQGLGGAKAKLPGGGCGGKGPGSG
GGKRRLSSEDSSLEPDLAEMSLDDGSSLALGAEASTFGGFPESPPHALPPSTPLSPPTFQ
SEPPDAYEEDGGVYFLEGPEPPVAPSSLPGLLPGEGTPQDDLPSTDESGGCPPKPKDMAP
GTGEEDDAYQVYYLNAQDGTGGEEEKPEVGAGEEQDLFAGLKPLKQESRMEVLFACAEAL
HAHGYSNEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLTKAAFL
LTVLGERPEHHNLAFRIGMFALELQRPPASTKALEVKLAYQESEVAALLKKIPLGVSEMS
TMRCRAEELREGTLCDYRPVLPLILASFIFDVLCTPVVSPTGSRPPSRNWNSEMPGDEEL
GFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQAKLKKILDKLLDRE
SQTHKPQTLSSFYSSSRPATSSQRSPSKHGAPAAAGALQPLPPSSAGGAQPGAVAAVNPD
PAEGFTEKTVPESSPRSPCEGPPPETTVAPKPEGKVPSRLALGSRGGYNGRGWGSPGRPK
KKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSS
SGSRRASASGGARAKTAEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGN
SSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQA
MEIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPN
EIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTVGGSATPR
EGATGCSAGGARASGEAGRALPEGRGGPGTEAVTVSAAAVTAAATVVPVISVGSGLYPGP
GLGHGHSTGLHPYTTLQPHLPCNPQYLTHPGHPLPHMPRPAVFPVPSSAYPQGVHHAFLG
PQYPYSVTPSSLAATAVSFPVPSMAPITVHPYHTESGLPLPTMNNVHTPSSIHQSSTYPA
VQGNSMSAMGNQPSSLVSGSFPPPEEETHSQPVGAQSLHHLHAAYRVGMLALEMLGRRAH
NDHPNNFSRSPPYTEDVKWLLGLAAKLGVNYVHQFCMGAAKGVLSPFVLQEIVMETLQRL
NPAHAHTHLRTPAFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRGARSAFCLTPM
GMMQFNDILQNLKRSKQTKELWQRVSLDMTTFSP
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgttcgccgagtgggaggacggcgagcgcttctcgttcgaggattcggac
cgcttcgaggaggactcgctctgctccttcatctcggaggccgagagcctctgccagaac
tggcggggatggcgcaagcagtcggcggggcccaactcccccacgggcggcggcggcggc
ggcgggggcggcgggggccgcagccgagacggcctggtgatccccttggtggaactgtcg
gcaaagcaggtggcattccacatcccctttgaggtggtggagaaggtttaccccccagtg
cctgagcagctacaactgcggattgccttctggagcttcccagagaacgaggaggacata
aggctctattcgtgcctggctaatgggagtgcagatgaattccagcgtggggaacagctg
ttccgaatgagagctgtgaaggatccactacaaatagggtttcacctgagtgccacagtg
gtgcctcctcagatggttccccctaagggggcatacaatgtggctgtgatgtttgaccga
tgccgggtcacctcctgcagctgcacctgtggggctggtgccaaatggtgcacccatgta
gtggccctttgcctcttcaggattcacaacgcttcggccgtctgccttcgggctcctgtc
tcagagtccctgtctcggctccagagggaccagctgcagaagtttgctcagtacctcatc
agtgagcttcctcagcagatccttcccacagcccagcgcctcctggatgaactcctgtcc
tcccaatctactgccatcaacactgtatgtggagccccagaccccactgcaggtccttca
gcttctgaccagagtacgtggtacttggacgagtctacgctcagtgagaacatcaagaag
acattgcacaaattctgtggtccctccccagttgtcttcagtgatgtaaactcaatgtat
ctgtcatcaactgagcccccagcagctgccgagtgggcatgtctcctgcgtcccctccga
ggccgagaacccgagggtgtatggaatctgctgagcatcgttcgggaaatgttcaagcgg
agagacagcaatgctgctccgctgctggagatcctcacggaccagtgtctcacctacgag
cagatcacaggctggtggtacagcgtgcgaacgtcagcttctcacagcagtgccagtggg
catacgggccgcagtaatgggcagtcggaggtggctgctcacgcctgtgcaagtatgtgt
gatgagatggtcacattgtggaggctggctgtgctggacccctcaattagcccacaacgt
cgccgagacctgtgtgtccagctgcgccagtggcacctgaaggtgattgagaatgtcaag
cggggccagcacaagaaagccctggagcgtctctttccaggtttccggcccgcggtggaa
gcctgcgacttcagctgggaggaggcttaccctctcccaggggtcacttacagcggctct
gacaggaagctggctctctgctgggcacgaagccttccatctcgggctggccctccccgc
tctgggggccccgacgaggctggggatcggcctcggccatccccaccagagccttcggtt
cgacctaaggagcccggggccaagcgcaaagggtcgggggagggggttccccagtcccag
cgtggcccccgccgcccctcagctgagggaggagagaagtctgcgcataagcagggtcta
ggtggagccaaggccaagcttccgggtggagggtgcggcggtaaaggcccagggagtggc
gggggcaagcgtcggctgagcagcgaggacagctccctggagccggacctggctgagatg
agcttggatgatggcagcagcctggctctgggggcagaggccagcacctttgggggcttt
cccgagagcccacctcatgcacttccccccagtactccccttagcccccctaccttccag
tctgaacctcccgatgcctatgaagaagatggcggtgtttacttcttagaggggcctgag
cccccagttgccccctccagcctacctggactgcttccgggggaaggaactccccaggat
gacctcccctccacagatgagagtggtggatgcccccctaaacccaaagatatggcccct
ggaactggggaagaagatgatgcttaccaggtgtattacctgaatgcccaggatgggact
gggggcgaggaagagaagcccgaggtgggtgctggcgaggagcaggacctttttgctggg
ctcaagcccctgaaacaggagagccgaatggaggttctctttgcttgtgctgaggccctg
cacgcccacggctacagcaatgaggcctcacgactcactgtggagctggctcaggatctg
ctggccaatccgcccgacctcaaggtggagccgcccccggccaagggaaagaagaacaag
gtgtccacgagtcgccagacctgggtggccaccaacactttgaccaaggcagccttcctc
ctgaccgtgctgggcgagcggcctgagcaccacaacttggccttccgcatcggcatgttt
gccctggagctgcagcggcctccggcttccaccaaggccttggaggtgaagctggcctac
caggagtcggaagtggctgctctgctgaagaagatccctctgggggtgagcgagatgagc
acgatgcgatgccgggcagaggagcttcgggaagggaccctgtgcgactaccggcccgtg
ctccccctcatcttggccagcttcatctttgatgttctctgcaccccagtagtttctccc
acaggatcccgcccgccgagccggaactggaatagcgagatgcctggggatgaagagctg
gggtttgaagccgcggtggctgccttgggcatgaagacgacggtgagcgaggccgaacac
cctctgctgtgcgaaggcacgcgccgggagaagggggacctggctctggcgctgatgatc
acctacaaggacgaccaggccaagctcaagaaaatcctggacaagctcctggaccgggag
agtcagacgcataagccacagaccctgagttcgttctactcgtccagccgcccagccacg
tccagtcagaggtccccatctaagcatggggcccctgccgcagcaggagccctgcagccg
ctgcctccgagctcagcaggaggtgcccaacctggggctgtggctgcagtcaaccccgac
ccagccgagggcttcacagaaaagactgtgcctgagagctccccgcggtccccttgtgag
ggccccccacctgagactactgtggcccccaaaccagaggggaaggttcctagtcgcttg
gcacttggcagccgaggaggctacaatggccggggctggggctccccaggaaggcccaag
aagaaacacacaggcatggccagcattgacagcagtgcccccgagacgacatcggacagc
tccccaaccctgagccggaggccactgcgggggggctgggcccccacctcctggggccgg
ggtcaggacagcgacagcatcagcagctcatcctccgactctctgggctcctcctcctcc
agtggcagccgccgtgccagtgcaagtgggggtgcccgggccaagacagctgaggttggc
aggtacaagggccgtcgccccgagagccatgccccccacgtacccaaccagccgtcggag
gcagctgcacacttctactttgagctggccaaaacggtgctgatcaaggctgggggaaac
agcagcacctccatctttacccacccatcctcatcagggggtcaccagggcccccaccgc
aatctgcatctttgcgcctttgagattggactctacgctctgggtctgcacaactttgtc
tcgcccaactggctctctcgcacctactcttcccatgtgtcctggatcacaggccaagca
atggagattgggagcgcagccctgaccatcctcgtcgagtgctgggatggacatctcaca
ccccccgaagttgcttccctggccgaccgggcgtcacgggcacgggactccaacatggtg
agggcagcggctgagttggccctgagttgcctaccccatgcccacgccttgaaccccaac
gagatccagcgagctttagtgcaatgcaaggaacaggataacctgatgctggagaaggcg
tgcatggccgtggaggaggctgccaagggtgggggtgtgtaccctgaagtgttgttcgaa
gtcgcccaccagtggttctggctttatgagcagacggtggggggctcagccacaccacgt
gagggtgccacaggctgcagtgccggtggggcccgggcatcgggggaggctgggcgggca
ctgcctgagggccgtggcggaccagggaccgaggcagtcacagtgtcggcagcggcagtg
acggcagcagccacagtggtaccagtcatttcagtggggtccggtttgtacccggggcct
ggcctgggacatggccactccactggcttgcacccctataccactctgcagccccacctg
ccctgcaacccccagtaccttacccaccccggtcaccccttgccccatatgcctcggcct
gctgtctttcctgtgcccagctctgcatacccacagggtgtgcaccatgccttcctgggt
ccccagtatccctactcagtgacgccgtcctcccttgctgccacagctgtgtccttcccc
gtcccttccatggcgcccataacggtgcacccctaccacactgaatcagggctcccactc
cccaccatgaacaatgtccatacacccagcagcatccatcaaagttccacctatcccgcc
gtccagggcaactccatgtcggccatgggcaaccagcccagctccctggtgagcgggagc
ttccccccgccggaggaggagacgcacagccagcccgttggcgcccagagcctgcatcac
ctgcacgctgcctacagagttggaatgctggcactggagatgttaggccggcgggcacac
aacgatcaccccaacaacttctcgcgcagccctccctacactgaggacgtcaaatggttg
ctggggctggcggctaagctgggagtgaactacgtgcaccagttctgtatgggggcagcc
aagggggtgctgagcccatttgtgctacaggagatcgtcatggagacgctgcagcgactg
aaccctgctcatgcgcacacccacctgcgcaccccagccttccatcagctggtccagcgc
tgccagcaggcgtacatgcagtacatccaccaccgcctgatccacctgactcctgccgac
tacgacgactttgtgaacgcaatccgaggcgctcgcagcgccttctgcctgactcctatg
ggcatgatgcagttcaacgacatcctgcagaacctcaaacgcagcaagcagaccaaggag
ctgtggcagcgtgtatcgcttgacatgaccaccttctccccttga
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integrated database retrieval system
