Sarcophilus harrisii (Tasmanian devil): 100918045
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Entry
100918045 CDS
T02286
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04110
Cell cycle
shr04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100918045 (SMC1A)
04114 Oocyte meiosis
100918045 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100918045 (SMC1A)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100918045 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
100918045 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
SlyX
ABC_tran
Motif
Other DBs
NCBI-GeneID:
100918045
NCBI-ProteinID:
XP_003771443
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All DBs
Position
5:121480731..121488266
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AA seq
1233 aa
AA seq
DB search
MGFLKLIEIENFKSYKGKQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAAVSMVYSENNGDERVFARIIVGGSSEYKINNKVVQLLEYSQE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEMEIEKLNK
ELTSKNKEIDKEKKRMDKVEEELKDKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKQYKKRKGDMDELEKEMVSVEKARQEFEDRMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVKLAKQRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQGREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLAKGTMDDISQEEGSSQGE
ESGSGSQRTSNIYAREALIEIDYSDLCEDLKDAQAEEEIKQEMNTLQQKLTEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKHAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgggttttctaaaactgatcgaaatcgaaaatttcaagtcctacaagggtaagcagatc
atcgggccctttcagaggtttacagccatcatcgggcctaacggctccgggaagtcgaat
cttatggacgctatcagtttcgtgctgggagaaaagaccagcaatttgcgggtaaagact
ttgcgggacctgatccacggggctcccgtgggcaaaccagccgccaaccgggcagcggtc
agcatggtgtattctgagaacaatggggatgaacgcgtctttgcccggataattgtgggg
ggctcctccgagtacaaaatcaacaacaaggtggtccagctgctcgaatacagccaagag
ctggagaaactgggcatcctcatcaaagctcggaacttcctagtgttccagggcgctgtg
gagtctattgctatgaagaaccccaaggagcggacagccttgtttgaggagatcagccgc
tcgggggaactggcccaggagtatgataaacggaagaaggaaatggtaaaggctgaggaa
gatacccagttcaattaccaccgaaagaagaacatcgctgccgagcgcaaggaagccaag
caagagaaggaggaagccgaccgctaccagaggctgaaagatgaagttgttcgtgcgcaa
gtgcagctgcagctcttcaaactgtatcacaatgagatggagattgagaaattgaataag
gaactcacttccaagaacaaggagattgacaaggaaaagaagcgcatggacaaggtggaa
gaagagctaaaggataaaaagaaagaactgggcaaaatgatgcgtgagcagcagcagatt
gagaaggagataaaagagaaagactcagagcttaatcaaaagcggcctcaatacatcaag
gccaaagaaaatacttcacataagatcaagaagttggaagctgccaagaagtctctgcag
aatgcccagaaacagtacaagaagcgaaagggtgatatggatgaactagaaaaggaaatg
gtgtcagtggagaaggctaggcaagaatttgaggatcgcatggaagaagagagtcagagt
caaggacgggatctgactctggaggagaatcaagtaaaaaagtaccacagactgaaggaa
gaagccagcaaaagagcagccaccctggcccaggagctagagaagttcaatagggaccag
aaggctgatcaagaccggctggacttagaagaacgaaaaaaagttgagacagaggccaag
atcaaacagaaacttcgggaaattgaagagaatcagaagcgaattgagaagctggaagaa
tacattaccactagcaagcagtctctggaggaacagaagaaactagagggcgagctaaca
gaagaagttaaactcgctaaacagcgcattgatgaaatcaacaaggaactgaatcaggtg
atggagcaacttggagatgcccgcatagaccggcaagaaagcagccggcagcaacgcaag
gcagagataatggagagcatcaaacgcctctatcctggttctgtttatggccgtctcatt
gatctgtgccagccaacacagaagaagtaccagattgccgtgactaaagtgttgggcaaa
aatatggatgccatcatagtggattctgaaaagactggccgggactgtatccagtatatc
aaggaacagcgaggggagcccgagacatttttaccacttgactacctagaagtgaaacca
actgatgaaaagctacgggaactgaagggggccaagctggtgattgatgtaattcgctat
gagccaccacacatcaagaaagccctccagtatgcctgtggcaatgctctagtatgtgac
aatgttgaagatgccaggcgaattgcctttggtggccatcagagacataagacagtagca
ctagatgggacacttttccagaagtctggtgtcatctctgggggagcaagtgacctcaaa
gccaaggcccgccgctgggatgagaaagcagttgacaaactgaaagagaagaaagagcgc
ctgacagaggagctaaaggaacagatgaaggccaagcggaaggaggctgagctgaggcaa
gtgcagtcccaggctcatggcttgcagatgaggctcaagtactcccagagtgacctggaa
cagacaaagacccgccaccttgcactcaacctacaggaaaagtccaagctggagagtgag
ctggctaattttgggcctcgtatcaatgacatcaagaggatcattcagggccgtgaacga
gagatgaaagacctgaaggagaagatgaaccaggtagaggatgaggtttttgaagagttc
tgccgagagattggagttcgcaatattcgtgaatttgaggaagagaaagtgaagcggcag
aatgaaatagccaagaaacggcttgaatttgagaaccagaagactcgcctgggtatccag
ctagattttgaaaagaatcagctgaaagaggaccaagacaaggttcacatgtgggagcag
actgtgaaaaaggatgagaatgaaattgaaaagctcaaaaaagaggagcagagacacatg
aaaataattgatgaaactatggcccagctgcaggacctcaagaaccagcatctggcaaag
aaatctgaggtgaatgacaagaaccatgagatggaggaaatccgtaaaaagttgggtgga
gctaacaaagaaatgacccacctgcaaaaagaggtaacagctatagagacaaagttagaa
cagaagcggagtgaccggcataacttgctgcaggcttgcaaaatgcaagatatcaagctg
cccctagccaagggaaccatggatgacatcagtcaagaagaagggagttcccagggggaa
gagtctgggagtggctcacaacgaacatccaacatttatgcccgcgaagcccttattgaa
attgactatagtgacctctgtgaggacctgaaagatgctcaggctgaagaggaaattaag
caggaaatgaacacgctgcagcaaaagctgacggaacagcagagtgtactgcagcgcatt
gcagctcccaacatgaaggctatggagaaactggagagtgtgcgtgacaagttccaggag
acatcagatgaatttgaggcagctcgaaagcgggccaagaaagctaaacatgcctttgag
cagattaaaaaggaacgctttgatcgcttcaatgcctgttttgagtccgtggccaccaac
attgacgagatctacaaagccctgtcccgtaacagcagtgctcaggctttcttgggtcct
gagaacccagaggagccctatttggatgggattaactacaattgtgtggcccctggcaag
cggttccggcccatggacaatctctctggtggggaaaagactgtagcagcccttgctttg
ctctttgccatccacagctacaaaccagcccccttctttgttctagacgaaattgatgca
gctttagataacaccaacattggcaaagttgccaactacataaaagaacagtcaacttgc
aactttcaagccattgtcatttcactgaaagaagaattttatacaaaagctgagagtctg
attggtgtctatcctgaacaaggggactgtgttatcagcaaggtactgacatttgacctt
accaaatacccagatgccaaccccaaccccaatgagcagtag
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integrated database retrieval system
