Sarcophilus harrisii (Tasmanian devil): 100918115
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Entry
100918115 CDS
T02286
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04390
Hippo signaling pathway
shr04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
100918115 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100918115 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100918115 (SOX2)
Transcription factors [BR:
shr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100918115 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100918115
NCBI-ProteinID:
XP_031813587
UniProt:
A0A7N4PLU7
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All DBs
Position
3:39158468..39160975
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AA seq
349 aa
AA seq
DB search
MYNMLETDLKPPGPQQTSGGGGGGGGGGGGGGGPNSTSAGGTNQKNSPDRVKRPMNAFMV
WSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKY
RPRRKTKTLLKKDKYTLPGGLLAPGGNSMGGGVGVGAGGLGGGVNQRMDSYAHMNGWSNG
GYGMMQEQLGYPQHPGLNAHNAAAAAAAAAAAAQMQPMHRYDVSALQYNSMTSSQTYMNG
SPTYSSMAYSQQAAPGGGAGGGGGGAMALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAG
DLRDMISMYLPGAEVPEPAAPSRLHMSQHYQGAPVPGTAINGTLPLSHM
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgctggagaccgatctcaagcctcccggccctcagcaaacttcggggggc
ggaggcggcggcggtggcggaggcggcggtggcggcggccccaactccacgtcggcgggc
ggcacgaaccagaagaacagcccggaccgcgtaaaacggcccatgaacgcttttatggtg
tggtcccgcgggcagcggcgcaagatggcccaggagaaccccaagatgcacaactcggag
atcagtaagcggctgggcgccgagtggaagctgctgtccgaggccgagaagcggcccttc
atcgacgaggccaagcggctgcgcgccttgcacatgaaggagcacccggactacaagtac
cggccgcgccggaaaaccaagacgctgctcaagaaggacaaatacacgttgcccggcggc
ctgctggctcccggcggcaacagcatgggcggcggcgtcggcgtcggagccggcggcctg
ggcggcggcgtgaaccagcgcatggacagctacgcgcacatgaacggctggagcaacggc
ggctacggcatgatgcaggagcagctgggctacccgcagcacccgggtctcaacgcgcac
aacgcggcggcggcggcggcggccgcggccgcggcggcccagatgcagcccatgcaccgc
tacgacgtgagcgccctgcagtacaactccatgacgagctcgcagacttacatgaacggc
tcgcccacctacagcagcatggcgtactcgcagcaggccgcccccggcggcggagccggc
ggaggcggcggcggcgccatggccctgggctccatgggctccgtggtcaagtcggaggcc
agctccagcccccccgtggtcacctcgtcgtcgcactccagggcgccctgccaggccggg
gacctgcgggacatgatcagcatgtacctgcccggcgccgaggtgcccgagcccgcggcg
cccagcagacttcacatgtcccagcactatcagggcgcgccggtgccgggcacggccatc
aacggcacgctgcccctgtcgcacatgtga
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