KEGG   Sarcophilus harrisii (Tasmanian devil): 100918120
Entry
100918120         CDS       T02286                                 
Symbol
NCSTN
Name
(RefSeq) nicastrin isoform X1
  KO
K06171  nicastrin
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04330  Notch signaling pathway
shr05010  Alzheimer disease
Brite
KEGG Orthology (KO) [BR:shr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    100918120 (NCSTN)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100918120 (NCSTN)
SSDB
Motif
Pfam: Nicastrin Ncstrn_small Peptidase_M28
Other DBs
NCBI-GeneID: 100918120
NCBI-ProteinID: XP_031822734
Ensembl: ENSSHAG00000006763
LinkDB
Position
4:363407707..363423990
AA seq 706 aa
MAAAGGGGGAASGGRRTCLLFCFVPLLAGLCQANSVERKIYIPLNRTAPCVRLLNATHQI
GCQSSISGDTGVIHVVEEEEDLKWVLTDGPNPPYMVLLEGNLFTRKLMEKLKGTQRISGL
AVALAKPSPLDGFSPSVECPNDGFGIYSNSYGSEYAHCKQLKWNPLGNGLAYEDFDFPIF
LLEDENETQVIKQCYWDHNRGVNGSAPAYPLCAMQLFSHMHAVTSTVTCMRRSAIQSTFS
INPVVCDPLADFNVWNTLNPLNASGKLEPGDKVIIAATRLDSRSFFWNVAPGAESAVGSF
ITQLAVAEALQKAPDVAALPRNVMFVFFQGETFDYIGSSRMVYDMERGKFPVQLENIHSF
LELGQVALRNSSDLWMHTDPMSQRDESISIEVHNLLTILKNSSTSVPNVTMREVNPQNSL
PPSSLQRFLRSQNISGVVLTDHPGSFYNRYYQSIYDTPENIGLKYPATLTPDEAMDFVTD
TAKSLAAVATVLGRALYQLAGGTNYTTIEADPITVSRLLYGFLVKANNSWFQSVIRQDLK
VFLGDGPLQHYIAVSSPINTTYVVQYVLANLTGTVVNLTREQCQDPKKAQDANKDLYEYA
WVQGPEDPSGTSRLSQCVRSTVRLAKAVSPAFELQQWGSSEYSTWTESRWKDIRARIFLV
ASKELEFVTLIVGLSILFVSLIVTYFINAKADILFTTPREPGAVSY
NT seq 2121 nt   +upstreamnt  +downstreamnt
atggccgctgctgggggtggcggcggagccgcctccgggggccgcagaacctgcctcctc
ttctgcttcgttcctctgctggcaggtctatgccaagcaaattcggtagagaggaagatc
tacatccctttgaacagaacagctccctgtgtccgcctgcttaatgccactcaccagatt
ggctgccagtcttccattagtggagatacaggagtgattcatgtagtggaagaggaggaa
gacctgaagtgggtcctaactgatggccctaacccaccctacatggtactgctggaaggc
aacctttttaccaggaaattgatggagaagctaaagggaacccaacgaatctctggtctt
gctgtggctcttgccaagcccagccccctggatggtttctctcccagtgttgaatgccct
aatgatgggttcggtatctactctaactcctatggatcagaatatgcccactgcaaacaa
ctaaaatggaacccactaggcaatgggttagcctatgaggattttgactttcccatcttt
ctattagaagatgagaatgaaacacaggttatcaagcagtgctattgggaccacaaccgg
ggggtgaatggatctgccccagcctacccactatgcgcaatgcagcttttctcacacatg
cacgctgttaccagcacagtcacttgcatgcgacgtagcgctatccagagcacattcagc
atcaacccagttgtctgtgaccccctggctgacttcaacgtgtggaacacattgaatcct
ttgaatgcatctgggaagttagagcctggggacaaagtgatcattgctgctaccaggttg
gatagtcgctcattcttctggaatgtggctcctggggccgagagtgctgttggatctttc
attacccagctggctgtggctgaagctctgcagaaggcaccggatgtggcggctctgccc
cgcaacgtgatgtttgtcttcttccaaggggagacctttgattacattggtagctcacgg
atggtgtatgacatggaaaggggcaagtttcctgtccagctggagaacatacactcattt
ttggaacttggacaggttgccttaaggaattcttcagacttgtggatgcatacagacccc
atgtctcagagagatgaatccatctctatcgaggtccacaatctcctgactatactgaag
aatagcagcactagtgtccctaatgtgacgatgcgggaggtgaacccacaaaactctctt
ccaccgtcttcccttcagaggtttctccgtagccaaaacatttctggggttgtgctcact
gatcaccctggctccttttataacaggtattaccagagtatctatgatactccagaaaac
attggtctgaagtatcctgcaaccctgacgcctgatgaggctatggactttgtgactgat
acagccaagtccttggcagctgtggctacagtgctgggacgtgcactataccagctagca
gggggaaccaactacaccactattgaggctgatccaataacggtctctcgcttgctctat
gggttcctggtgaaagccaacaactcatggttccaatcagttatcaggcaggacctgaag
gtcttcctgggagatgggcccctccagcattacattgctgtctccagccccatcaacacc
acctatgtggtgcagtatgttctggcaaacttgactggcactgtggtcaaccttacccgg
gagcagtgccaagacccaaagaaggcccaagatgcaaacaaggatctgtatgagtatgca
tgggtccaaggtcccgaggaccccagtgggacaagtaggctttcccagtgtgtgcgctcc
acagttcgactggccaaggctgtgtctcctgcctttgagctgcagcagtggggttcctct
gaatattccacctggacagaaagccgctggaaagacatccgtgcccgaatttttcttgta
gccagcaaggaacttgagtttgtcaccctgattgtgggtctcagcatcctcttcgtctcg
ctcatcgtcacctacttcatcaatgccaaagctgatatcctgttcaccacccctcgagag
cccggagctgtgtcttactga

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