Sarcophilus harrisii (Tasmanian devil): 100918120
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Entry
100918120 CDS
T02286
Symbol
NCSTN
Name
(RefSeq) nicastrin isoform X1
KO
K06171
nicastrin
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04330
Notch signaling pathway
shr05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100918120 (NCSTN)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100918120 (NCSTN)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
100918120
NCBI-ProteinID:
XP_031822734
Ensembl:
ENSSHAG00000006763
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Position
4:363407707..363423990
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AA seq
706 aa
AA seq
DB search
MAAAGGGGGAASGGRRTCLLFCFVPLLAGLCQANSVERKIYIPLNRTAPCVRLLNATHQI
GCQSSISGDTGVIHVVEEEEDLKWVLTDGPNPPYMVLLEGNLFTRKLMEKLKGTQRISGL
AVALAKPSPLDGFSPSVECPNDGFGIYSNSYGSEYAHCKQLKWNPLGNGLAYEDFDFPIF
LLEDENETQVIKQCYWDHNRGVNGSAPAYPLCAMQLFSHMHAVTSTVTCMRRSAIQSTFS
INPVVCDPLADFNVWNTLNPLNASGKLEPGDKVIIAATRLDSRSFFWNVAPGAESAVGSF
ITQLAVAEALQKAPDVAALPRNVMFVFFQGETFDYIGSSRMVYDMERGKFPVQLENIHSF
LELGQVALRNSSDLWMHTDPMSQRDESISIEVHNLLTILKNSSTSVPNVTMREVNPQNSL
PPSSLQRFLRSQNISGVVLTDHPGSFYNRYYQSIYDTPENIGLKYPATLTPDEAMDFVTD
TAKSLAAVATVLGRALYQLAGGTNYTTIEADPITVSRLLYGFLVKANNSWFQSVIRQDLK
VFLGDGPLQHYIAVSSPINTTYVVQYVLANLTGTVVNLTREQCQDPKKAQDANKDLYEYA
WVQGPEDPSGTSRLSQCVRSTVRLAKAVSPAFELQQWGSSEYSTWTESRWKDIRARIFLV
ASKELEFVTLIVGLSILFVSLIVTYFINAKADILFTTPREPGAVSY
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgctgggggtggcggcggagccgcctccgggggccgcagaacctgcctcctc
ttctgcttcgttcctctgctggcaggtctatgccaagcaaattcggtagagaggaagatc
tacatccctttgaacagaacagctccctgtgtccgcctgcttaatgccactcaccagatt
ggctgccagtcttccattagtggagatacaggagtgattcatgtagtggaagaggaggaa
gacctgaagtgggtcctaactgatggccctaacccaccctacatggtactgctggaaggc
aacctttttaccaggaaattgatggagaagctaaagggaacccaacgaatctctggtctt
gctgtggctcttgccaagcccagccccctggatggtttctctcccagtgttgaatgccct
aatgatgggttcggtatctactctaactcctatggatcagaatatgcccactgcaaacaa
ctaaaatggaacccactaggcaatgggttagcctatgaggattttgactttcccatcttt
ctattagaagatgagaatgaaacacaggttatcaagcagtgctattgggaccacaaccgg
ggggtgaatggatctgccccagcctacccactatgcgcaatgcagcttttctcacacatg
cacgctgttaccagcacagtcacttgcatgcgacgtagcgctatccagagcacattcagc
atcaacccagttgtctgtgaccccctggctgacttcaacgtgtggaacacattgaatcct
ttgaatgcatctgggaagttagagcctggggacaaagtgatcattgctgctaccaggttg
gatagtcgctcattcttctggaatgtggctcctggggccgagagtgctgttggatctttc
attacccagctggctgtggctgaagctctgcagaaggcaccggatgtggcggctctgccc
cgcaacgtgatgtttgtcttcttccaaggggagacctttgattacattggtagctcacgg
atggtgtatgacatggaaaggggcaagtttcctgtccagctggagaacatacactcattt
ttggaacttggacaggttgccttaaggaattcttcagacttgtggatgcatacagacccc
atgtctcagagagatgaatccatctctatcgaggtccacaatctcctgactatactgaag
aatagcagcactagtgtccctaatgtgacgatgcgggaggtgaacccacaaaactctctt
ccaccgtcttcccttcagaggtttctccgtagccaaaacatttctggggttgtgctcact
gatcaccctggctccttttataacaggtattaccagagtatctatgatactccagaaaac
attggtctgaagtatcctgcaaccctgacgcctgatgaggctatggactttgtgactgat
acagccaagtccttggcagctgtggctacagtgctgggacgtgcactataccagctagca
gggggaaccaactacaccactattgaggctgatccaataacggtctctcgcttgctctat
gggttcctggtgaaagccaacaactcatggttccaatcagttatcaggcaggacctgaag
gtcttcctgggagatgggcccctccagcattacattgctgtctccagccccatcaacacc
acctatgtggtgcagtatgttctggcaaacttgactggcactgtggtcaaccttacccgg
gagcagtgccaagacccaaagaaggcccaagatgcaaacaaggatctgtatgagtatgca
tgggtccaaggtcccgaggaccccagtgggacaagtaggctttcccagtgtgtgcgctcc
acagttcgactggccaaggctgtgtctcctgcctttgagctgcagcagtggggttcctct
gaatattccacctggacagaaagccgctggaaagacatccgtgcccgaatttttcttgta
gccagcaaggaacttgagtttgtcaccctgattgtgggtctcagcatcctcttcgtctcg
ctcatcgtcacctacttcatcaatgccaaagctgatatcctgttcaccacccctcgagag
cccggagctgtgtcttactga
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