Sarcophilus harrisii (Tasmanian devil): 100918165
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Entry
100918165 CDS
T02286
Symbol
TSC1
Name
(RefSeq) hamartin isoform X1
KO
K07206
tuberous sclerosis 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04072
Phospholipase D signaling pathway
shr04140
Autophagy - animal
shr04150
mTOR signaling pathway
shr04151
PI3K-Akt signaling pathway
shr04152
AMPK signaling pathway
shr04211
Longevity regulating pathway
shr04218
Cellular senescence
shr04714
Thermogenesis
shr04910
Insulin signaling pathway
shr05163
Human cytomegalovirus infection
shr05165
Human papillomavirus infection
shr05168
Herpes simplex virus 1 infection
shr05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04072 Phospholipase D signaling pathway
100918165 (TSC1)
04151 PI3K-Akt signaling pathway
100918165 (TSC1)
04152 AMPK signaling pathway
100918165 (TSC1)
04150 mTOR signaling pathway
100918165 (TSC1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100918165 (TSC1)
09143 Cell growth and death
04218 Cellular senescence
100918165 (TSC1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
100918165 (TSC1)
09149 Aging
04211 Longevity regulating pathway
100918165 (TSC1)
09159 Environmental adaptation
04714 Thermogenesis
100918165 (TSC1)
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
100918165 (TSC1)
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100918165 (TSC1)
05163 Human cytomegalovirus infection
100918165 (TSC1)
05165 Human papillomavirus infection
100918165 (TSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hamartin
Motif
Other DBs
NCBI-GeneID:
100918165
NCBI-ProteinID:
XP_003775291
Ensembl:
ENSSHAG00000005234
UniProt:
G3VS55
LinkDB
All DBs
Position
2:complement(484787680..484827702)
Genome browser
AA seq
1187 aa
AA seq
DB search
MSGRGTNEEPVEILMCVPKLARAHTYKIMAQQANISELLSMLDSSALGVLDDITTVFKEN
LNSDRGPMLVNTLVDYYLETNSQQVLRILTTLQEPHDKHLMDKINEYVGKAATRLPVLSL
LGHVIRLQPPWKHKLSQAPLLPSLLKCLKTDTDVVILTTGVLVLITMLPMIPQSGKQYLH
DFFDVFGRLSSWCLKNPGHVTEIYLVHLHASVYALFHRLYGMYPCNFVSFLRSHYSMKEN
LETFEEVVKPMMEHVRIHPELVTGSKDHELDPRRWKRLETHDVVIECAKISLDPTEASYE
DGYSVSQQISTRFHHRPTDAIASPYVDTQNSYGNATSTPYSTPRLALLNTPGQLPQVLSF
SSTRLSTEPTQATIWSPSAVCGMTTPPTSPGNVPPELSHPYSKVFGTPGGKGTPLGTPAT
SPPPPCHSDDYVHISPPQAIVMPPKKEDRLDSVRPCLHRQHHLPNDRGLEETSDNKSSVT
LSDLPEFLGDLASEEDSVEKDKEEAAISKELSEITTADTEPVVPRGGFDSPFYRDSLPCS
QRKSHSTSSNTQGPSVSTELLTSSLDKLGPDTPKQAFTPIDRPCGCDNESPAGNRESQTS
LETNILTPSPCKIPSQKVGFGSGQPPPYDHLFEMALPKTAYHFVSKKTEELLKKVKGNTE
EDYMPSTSPVEVLDRLIQQGADAHTKELNKLSLPSKSVDWTHFGGSPPSDEIHTLRNQLL
LLHNQLLYERFKRQQHALRNRRLLRKVIKATALEEHNAAMKDQLKLQEKDIQMWKVSMQK
EQARYNQLQEERDTVVTQLHSQIKQLQHDREEFYNQSQELQTKLEDCRNMIAELRLELKK
ANNKVCHRELLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQNKHADTTQE
VEMMKTSYRKELEKNRSHLLQQNQRLDTSQKRIVELESHLAKKDHLLLEQKKYLEDVKLQ
ARGQLQAVESRYEAQKRITQAFELEILDLYGRLEKDGLLKKLEEKTEAAEAAEERFDCCN
EGCPDSLVGHNEEAAGHNGETKTPKSGSSRGSSGSRGGGGSSSSSSELSTPEKPPNQRVG
PFSSRWETTVEPSTSIPVTVGSLPSSKSFLAIKARELFRNKSESQCDEDGLTNNSLSETL
KTELYKDPNLEVKAPLGLDNPHPSPKNQESVGQLRIMDYNETQHEPS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtagaggcacaaatgaagaacctgtggaaattttaatgtgtgtaccaaaacta
gcaagagcacatacatataagataatggcacagcaagcaaatattagtgaactcctctcc
atgctggattcctcagctctgggtgtgttagatgacataacaactgtctttaaagagaat
ctcaattctgaccgtggtcctatgcttgtaaacacattggtggattattatctggaaacc
aattctcaacaggtattacgcatcttgactacattgcaagagcctcatgataagcacctc
atggacaaaattaatgaatatgtgggcaaagctgctactcgtttacctgtcctctcctta
ctggggcatgtcataagactgcaacccccgtggaagcataagctctctcaagcgcctctc
ttgccttctttgcttaagtgtctcaagactgatacagatgtagtaatactcacaacagga
gttttagtcttaataaccatgctgccaatgattccacagtcaggcaaacaataccttcat
gacttctttgatgtttttggccgtctttcatcatggtgcctgaagaatccaggtcatgtg
acagaaatttatctcgtccatcttcatgccagtgtttatgctctctttcatcgcctttat
ggaatgtacccatgcaactttgtctcctttctacgttctcactacagtatgaaggaaaac
ttggagacctttgaagaagtggtaaagccaatgatggaacatgttcgaattcatccagaa
ttagtgactggatccaaggaccatgaactagacccacgcaggtggaagagattagaaact
catgatgttgtaatagaatgtgccaaaatttctctggaccccactgaagcctcatatgaa
gatggctattctgtgtctcagcagatctcaacacgctttcatcatcgtccaactgatgcc
atcgccagcccttatgttgacacacagaatagctatgggaatgctacttctaccccttat
tccactcctcggctggcgttgttaaacacgccagggcagctacctcaggttctgagtttc
tcatcaacacggctgtcaactgagccgacacaagctactatatggagcccctctgcagtc
tgtggtatgaccactcctccaacctcacctggaaatgtcccacctgagttgtcacaccct
tatagcaaagtctttggtacacctggtgggaaaggaactcctttgggaacaccagcaacc
tcccctcctcctccctgccattcagatgactacgtgcacatttcaccccctcaggctata
gtcatgccccccaagaaggaggacagactggattctgtgagaccatgtctacacagacaa
catcatcttcctaatgatagaggattagaagaaacatctgacaataagagttctgtcact
ttaagtgatcttccagagtttttaggtgatttagcctctgaagaagatagtgttgagaaa
gataaggaagaagctgcaatatcaaaggaactttctgagatcactacagcagatactgag
cctgtggtgcctcgaggaggatttgactctcctttctatcgagacagtctcccatgttct
cagaggaagtcccattcaacatcttctaacactcaaggtcctagtgtgagcactgaactt
ctaacttcctctctggacaagcttgggcctgacacaccaaagcaagcctttacacccata
gatcggccttgtgggtgtgacaatgaaagccctgctggtaacagggaaagccagacttca
ttggagacaaacatcttaacgcctagcccttgtaaaattccatctcagaaagtaggtttt
ggaagtggacaacctcccccatatgatcatctttttgagatggcactgccaaagactgct
taccattttgtcagcaagaagacagaagagctattaaagaaagtaaaaggaaatacagag
gaagattatatgccctccacttccccagtggaggtgctggataggctgattcaacaggga
gcagatgcacatacaaaagagctaaacaagttgtctttgcccagtaaatctgtcgattgg
acccactttggaggctctccaccctcagatgagattcacacccttcggaaccaattgctg
ttactgcacaaccagttactctatgagcgcttcaaaagacagcagcatgctctccggaac
agaagactcttacggaaggtgatcaaagccacagctctggaggaacacaacgctgctatg
aaagatcagttgaagttacaagagaaagacatccagatgtggaaggttagtatgcagaag
gaacaggccagatacaatcagcttcaagaggaacgtgacactgtggtgacccagctccac
agtcagatcaaacagctgcaacatgatcgggaggaattttacaatcaaagccaggaactg
cagacaaagctggaagactgccgaaatatgattgcagagctgaggttagaattaaagaag
gccaataataaggtgtgtcacagagagttgctgctcagccaagtttctcaaaagctttca
aacagtgagtcagtccagcagcagatggagttcttgaacaggcagctgttagttcttggg
gaggtcaatgagctgtatttggaacaattgcagaacaagcatgcagatactacacaggaa
gtggaaatgatgaagacttcttatcggaaggaactagagaaaaatagaagccatcttctt
caacagaatcagcggcttgatacctctcaaaaacggattgtggaactagaatctcatctg
gccaagaaagaccatcttctgttggaacagaaaaaatacctggaggatgttaaacttcag
gctagaggacagctacaggcagtagagagcaggtatgaggctcagaaaaggattacccag
gcatttgaattagaaatcttagatttgtatggcagattggagaaagatggcctcctgaaa
aaacttgaagaaaagacagaagcagctgaggcagctgaggaaaggtttgactgttgtaat
gaaggttgccctgattcactggtagggcacaatgaagaggctgctggccacaatggtgaa
actaagacccccaagtctggtagcagccggggcagtagtggcagcagaggtggtggagga
agtagtagcagcagtagtgagctttctacccctgagaaacccccaaaccagagagtaggg
ccattcagcagtcggtgggaaacaacagtagaaccttccaccagcatccctgtgactgtg
ggctcacttcccagttcaaagagcttcctggccataaaggctcgagaattgtttcgtaat
aagagtgagagccagtgtgatgaggatggcttgaccaacaacagcctttctgagacacta
aagactgaactgtacaaagatccaaacttggaagtaaaggctcccctgggcctagacaac
cctcacccatctcccaaaaaccaggaaagtgttggacagcttcgtatcatggactacaat
gagactcagcatgaacccagttaa
DBGET
integrated database retrieval system