Sarcophilus harrisii (Tasmanian devil): 100918183
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Entry
100918183 CDS
T02286
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
100918183 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100918183 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
shr03310
]
100918183 (RORB)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100918183 (RORB)
Nuclear receptors [BR:
shr03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100918183 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100918183
NCBI-ProteinID:
XP_031795413
Ensembl:
ENSSHAG00000018693
UniProt:
A0A7N4P560
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All DBs
Position
1:249229499..249484554
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AA seq
459 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQNGEAEALAR
VYSSSISNGLNNLNNETGGTYSNGHVIDLPKSEGYYNVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKAYQSKTREALWQQCAVQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCTTVCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgataagtcctctggaatc
cactatggagtcatcacatgtgaaggttgcaagggattctttcgaaggagccagcagaac
aatgcatcttactcctgcccaaggcagagaaactgtttaattgacagaacgaacagaaac
cggtgccaacattgccggctgcagaagtgtcttgccctaggaatgtctcgagatgctgtc
aaatttgggaggatgtccaagaagcaaagggacagcctatatgcagaagtgcagaagcac
cagcaacggcttcaggaacaacggcaacagcagaatggggaggcagaggcccttgccagg
gtctacagcagcagcatcagcaatggcctgaacaacctgaacaacgaaacaggtggcacc
tattccaatgggcatgtcattgacttgccaaagtctgagggttattataacgtggattcg
ggccagccatccccagatcagtcaggactggatatgactggaatcaaacagataaagcaa
gaacctatctatgacctcacttctgtacccaacttgtttacctatagctctttcaacaat
gggcaattagcaccagggataaccatgactgaaatagatcgaattgcacagaacatcatt
aagtcccatttggagacgtgtcaatacaccatggaggagctacaccagctagcctggcag
actcacacatatgaagaaattaaggcgtatcagagcaagaccagagaggcattgtggcaa
cagtgtgctgttcagatcactcacgcaatccaatatgtggtggagtttgcgaagaggatc
acaggtttcatggagctctgtcaaaacgatcagattctactcctgaagtcaggttgcttg
gaagtggttttagtgagaatgtgtcgtgccttcaacccactaaacaacactgttctgttt
gaaggaaagtacggaggaatgcaaatgttcaaagccttaggttccgatgacctggtgaat
gaagcattcgacttcgcaaagaatttgtgttccttgcagctgacagaagaagagattgcc
ttgttctcatctgctgtgctgatatctccagaccgagcctggctaatagaacctcggaag
gttcagaagcttcaggagaaaatttatttcgcacttcagcatgtgattcagaagaatcac
cttgatgatgagactttggcaaagttaatagccaagataccgaccatcaccgcagtttgc
aacttgcatggagagaaactgcaggtatttaagcaatctcatcctgatatagtgaacaca
ctatttcctccattatataaggagcttttcaaccctgactgtactacagtctgcaaatga
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