Sarcophilus harrisii (Tasmanian devil): 100918441
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Entry
100918441 CDS
T02286
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03030
DNA replication
shr03410
Base excision repair
shr03420
Nucleotide excision repair
shr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100918441 (RFC5)
03410 Base excision repair
100918441 (RFC5)
03420 Nucleotide excision repair
100918441 (RFC5)
03430 Mismatch repair
100918441 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shr03032
]
100918441 (RFC5)
03036 Chromosome and associated proteins [BR:
shr03036
]
100918441 (RFC5)
03400 DNA repair and recombination proteins [BR:
shr03400
]
100918441 (RFC5)
DNA replication proteins [BR:
shr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100918441 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
100918441 (RFC5)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100918441 (RFC5)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100918441 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
100918441 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_16
AAA_11
AAA_22
AAA_24
AAA_assoc_2
AAA_14
RuvB_N
DUF815
DEAD
ResIII
AAA_5
AAA_19
PhoH
ATPase_2
TIP49
AAA_7
AAA_30
nSTAND3
TniB
Mg_chelatase
bpMoxR
DNAX_ATPase_lid
Thioredoxin_6
AAA_3
IstB_IS21
NPHP3_N
AAA_2
AAA_25
Motif
Other DBs
NCBI-GeneID:
100918441
NCBI-ProteinID:
XP_003761227
Ensembl:
ENSSHAG00000013889
UniProt:
G3WLM1
LinkDB
All DBs
Position
1:695965377..695982810
Genome browser
AA seq
343 aa
AA seq
DB search
MEAPAVRKQQQQQQQPVTKSRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLL
LYGPPGTGKTSTILACAKQLYKDKEFNSMVLELNASDDRGIDIVRGPILSFASTRTIFKK
GFKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPL
TPELMVPRLEHVIEEEKVDISEDGMKALITLSSGDMRRALNILQSTNMAFGKVTEETVYT
CTGHPLKTDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPPAV
RIHLLIKMADIEHRLAVGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaggctccggctgtccggaagcagcagcagcagcagcagcagcctgtgaccaaaagc
aggaacctgccttgggttgaaaaataccgaccacagacactgaatgacttaatctctcat
caggatatcctaagcaccatccaaaaatttatcagtgaagatcgactgccacatctgctt
ctttatggcccccccgggacaggaaagacatccaccattctggcctgtgccaaacaactc
tacaaagacaaagagttcaactccatggtcctggagctcaatgcttctgatgaccgagga
atagatattgtacggggaccgattctgagctttgccagcacaaggacgatatttaagaaa
ggttttaaactcgtgatactggatgaggcagatgcaatgacccaggatgctcagaatgcc
ttgagaagagtgattgaaaaattcacagagaacaccaggttttgtctcatctgtaattac
ctgtcaaagatcatccccgccctgcagtctcgatgcaccaggttccgatttggtcccttg
actccagagctgatggttccccgcctggagcatgtcatagaagaagagaaggttgacata
agtgaagatggaatgaaagctctcatcaccctttctagtggtgacatgcgaagggccctg
aacattttgcagagcaccaacatggcttttggaaaggtgaccgaggagacggtgtatacc
tgcacagggcacccgctcaagactgacatcgccaacattctggactggatgctgaaccag
gacttcaccacagcgtacaggaatatcatggaactgaaaaccctcaagggtttggcactg
catgatattctgacagagatacacttatttgtacatcgagttgactttccacctgcagtt
cgaatacatttgctgatcaaaatggcagatattgaacacagacttgctgttggcacaagt
gagaagattcagctaagttctctcattgctgcttttcaagtcaccagagatttaattgta
gcagaagcctga
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integrated database retrieval system
