Sarcophilus harrisii (Tasmanian devil): 100918506
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Entry
100918506 CDS
T02286
Symbol
SPTB
Name
(RefSeq) spectrin beta chain, erythrocytic isoform X2
KO
K27409
spectrin beta, erythrocytic
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shr04812
]
100918506 (SPTB)
Cytoskeleton proteins [BR:
shr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100918506 (SPTB)
Intermediate filaments
Intermediate filament-binding proteins
100918506 (SPTB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
CAMSAP_CH
Tnp_22_trimer
MmeI_TRD
Motif
Other DBs
NCBI-GeneID:
100918506
NCBI-ProteinID:
XP_012404165
Ensembl:
ENSSHAG00000011913
UniProt:
A0A7N4P7T0
LinkDB
All DBs
Position
2:complement(322448541..322614566)
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AA seq
2135 aa
AA seq
DB search
MTSATEFDNVGIQQYSRINARWDSPDNELDNDNSSARLFERSRIKALADEREVVQKKTFT
KWVNSHLARVSCRIADLYKDLRDGRMLIKLLEVLSGEMLPKPTKGKMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIVVQTQEGQETRSAKDALLL
WCQMKTSGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFEKLKDSNARHNLEHAFDVA
ERQLGIIPLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKVLAVEGKRVGKVIDHAIETE
KMIEKYSGLASDLLTWIEQTITVLNSRKFANSLSGLQQQLQSFSTYRTVEKPPKFQEKGN
LEVLLFTIQSRMRANNQKVYTPHEGKLVSDINRAWESLEEAEYRRELALRNELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGYDLAAVEAAKKKHEAIETDTAAYEERVKAL
EDLAQELEKENYHDLKRIKARKDNILRMWSYLLELLQSRRQRLEMTLTLQKLFQDMLHSI
DWIDEIKVHLLSSEFGKHLLEVEDLLQKHKLMEADIAIQGDKVKAITSAALQFTDGKGYQ
PCDPQVIQDRVSHLELCFGELSSMAAGRKARLEQSKRLWKFFWEMDEAESWIKEKEQIYS
SLDYGKDLTSVLILQRKHKAFEDELRGLDAHLEQIMKEAEDMVAQKHFGYPQIEARIREV
SALWDQLKELAAFRKKNLQDAENFFQFQGDADDLKAWLQDAHRLLSGEDVGQDEGATRAL
GKKHKDFLEELEESRGVMEHLEQQAQSFPQEFRDSPDVNNRLQALRELYQQVVAQADLRR
QRLQDALDLYTVFGETDACELWMGEKEKWLAQMEIPDTLEDLEVVQHRFDILDQEMKTLM
TQIDGVNLAANSLVESGHPRSAEVKKCQDHLNQRWETFQKMVSERRKAVDSALSVHNYCV
DCEETGKWILDKTEVVKSTQDLGRDLAGVIAIQRKLYGLERDVAAIQSRIGALERESQRL
IQEHPELKEDIGKRQAYVEELWQKLQQALQGQEASLGEASQLQKFLQDLDDFQAWLFMAQ
KAVASEDAPDSLPEAEQLLQQHAAIKDEIDGHKNDYQNVKDSGEKVIRGQTDPEYQLLGQ
RLEGVNTGWDALCKMWENRGQFLTQCLGFQEFQKDAKQAESILSNQEYTLAHLEPPDSLE
AAEAGIRKFEDFLVSMENNQDKILNTVDSGNKLVDEGNIYSDKIKEKVLLIEDRHKKNNE
KSQEAAVLLRDNLDLQNFLQNCQELILWINDKLLSSQDISYEEARNLHNKWQKHQAFMAE
LASNQEWLEKVDKEGRQLIEEKPQFTDVVTQRLRQLHRLWDELQATTQEKAQHLFAASRS
DLHAQTYADLNKWISAMEDQLRSDDPGKDLTSVNRMLTKLKRVEDQVNVRKKELGELLSQ
VPPVGGEGDSTETSIEKRFLDLLVPLGKRKKQLESSRAKLQINRDIEDEMLWVEERLPLA
QSADYGANLQSVQLLMKKNQTLQNEIVGHAPRIEDVLHRGHELVEVAEIDCQDIAERLGH
LQGSWELLRDETAGRLQRLREANEAQQYYLDAGEAEAWISEQELYVISDETPKDEESAIV
MLKRHLRQQRSVEEYGKNIKQLAGRAQKLLSAGHPEGEQIIRLQGQVDKQYAGLKDLAEE
RKRKLENMYHLFQLKREADDLEQWIAEREVVASSQEMGQDFDHVTLLRDKFRDFARETGA
IGQERVDNVNLIIEQLIDAGHAEAATIAEWKDGLNEIWADLLELIDTRMQLLAASYDLHR
YFYMGEEIQGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELDQLGVQMHQFRDMATR
LQTAYAGEKADEIQSKEQEVSASWQALLAACTGRRAQLVDTADKFRFFSMVRDLLSWMES
IIRQIETQEKPRDVSSVELLMKYHQGIKAEIETRSKNFSTCLELGESLLQRQHQASEEIK
EKLNQVMSKRQEMMKKWDNRAERLLLLLEVCQFSRDASVAEAWLIAQEPYLASRDFGHTV
DSVEKLIKRHEAFEKSTAPWAERFAALEKLTTLELKELQTPERPTEDIGAQEEEGETAGE
PPREFYRAATEITSLVSSRSHLSSSRESVQPDPMS
NT seq
6408 nt
NT seq
+upstream
nt +downstream
nt
atgacatccgccactgagtttgacaacgtgggcatccagcagtacagcaggatcaacgcc
cgctgggattccccagacaatgagttggacaatgacaatagctccgccaggctctttgag
aggtctcggatcaaggccctagcagatgagcgggaagttgttcagaagaagactttcaca
aaatgggtaaattcacacctggcacgtgtatcctgtcgtattgctgacctctacaaggac
ctgcgggatggaaggatgctcatcaaacttctggaagtcctctcaggagagatgctgcca
aaacctacaaaagggaagatgcggattcactgcttagagaatgttgacaaagccctgcaa
ttcctcaaggagcagcgagtacatctggaaaatatgggttctcatgatattgtagatggc
aatcaccgtcttgttctgggtcttatctggaccattattcttcgcttccagatccaagac
atagttgttcaaactcaagagggtcaggagactcgctctgctaaggatgcactactgctt
tggtgtcagatgaagacatcaggttatccccacgtcaatgtcaccaattttacctccagc
tggaaggatggtctggcctttaatgccttgattcacaagcatcggccagatttaattgac
tttgagaagctgaaggactccaatgcccgacacaacctggaacatgcatttgatgtggca
gaaagacaactgggcattatcccactccttgacccagaagatgtcttcacagagaatcct
gatgagaaatccatcattacttatgtggtagcattttaccattatttctccaagatgaag
gtgctggctgtggagggcaagcgtgttggcaaggtgattgaccatgccattgaaactgag
aagatgattgaaaaatacagtgggctggcctctgatctgcttacctggattgagcagact
attactgtcctcaacagccgcaagtttgctaattccctgagtgggttacagcagcagttg
caatctttcagcacctaccgaactgtggagaagccacccaaatttcaagagaagggaaat
ctggaagtcctactttttaccatccagtccaggatgagggccaacaatcagaaagtgtac
acaccccatgaagggaaacttgtgtctgacattaaccgggcctgggaaagcctggaagaa
gctgaatatcggcgagagcttgccttgaggaatgaactcattcgtcaagagaaattagaa
caattggccaggcgttttgaccgcaaggcagcaatgagggaaacatggctcagtgagaac
cagcgcctggtctcccaggataactttggttacgacctggcagctgtggaagcagccaag
aagaagcatgaagccattgagacagatactgctgcttatgaggagagggtgaaggccctg
gaagatctggcacaggaattggagaaggagaactatcatgacttgaagcgcatcaaggcg
agaaaggacaacattctgcgtatgtggtcctacttgttggagcttctgcaatctcggcgc
caaaggctggagatgactctgacgctgcagaagctcttccaagatatgcttcacagcatc
gactggatagatgagatcaaggttcacctcctgtcctctgaatttgggaaacacttgtta
gaggtagaggacctgcttcagaagcacaagctgatggaagctgacattgccatccagggg
gataaagtgaaggcaatcacatcagctgctctccaattcacggatgggaaaggttaccag
ccttgtgacccccaggttatccaggatcgggtcagccacttggagctgtgctttggagag
ttaagctcaatggcagcagggaggaaggcccgtctagagcagtccaagagactgtggaag
tttttttgggagatggatgaggcagaaagctggatcaaggaaaaggagcagatctattcc
tcattggactatggcaaggacttgaccagtgtgttaatcttgcagcgtaagcacaaggcc
tttgaggatgaacttcggggactagatgcccacctggagcagataatgaaggaagcagag
gacatggtggcccaaaagcattttgggtacccgcagattgaggcccgcatccgggaggta
tctgccctttgggaccagctgaaggagctggctgctttccgcaagaaaaacctccaggat
gctgagaatttcttccagttccagggagatgctgatgacttgaaggcctggctgcaagat
gcccaccgcttgctctcaggagaggatgttggacaagatgaaggagctacacgagccctg
ggaaaaaagcataaggactttctcgaagaattggaagagagtcgaggggtgatggaacac
ctggaacagcaagcccagagcttcccacaagaattccgggattctcctgatgtgaacaac
cgattacaggctcttcgggaactttaccagcaggtggtagctcaggctgacctacgtcgg
caaaggctacaggatgctctggatttatatacagtatttggtgagacagatgcctgtgaa
ctgtggatgggggagaaggagaagtggctggctcagatggagatcccagataccctggag
gacctagaggtggtacagcacaggtttgacattctggaccaggaaatgaaaacgctgatg
acacagattgatggggtgaatcttgctgcaaacagcttggtggaaagtggtcacccacgt
agtgctgaagtgaagaaatgtcaggatcatttgaaccaaagatgggagaccttccagaaa
atggtgtctgagcgccgaaaggcagtggactctgccctcagtgtacacaactattgtgtg
gactgtgaggagacaggcaagtggattctggacaaaacagaggtggtaaagtcaacccaa
gatcttggccgggacctagctggagtgattgctatccagcggaaattgtatggattagag
cgggatgtagctgctattcaatctcggataggtgccctagagcgggagtcccagcgactt
atccaggagcatcctgaattgaaggaggatattggaaagcggcaagcttatgttgaggag
ttgtggcagaagttgcagcaagccctgcagggccaggaagcatccttaggtgaagccagt
cagctgcagaagttcctacaagatcttgatgacttccaggcatggctgttcatggcacaa
aaggctgtggcttcagaagatgcgcctgactccctgccggaggctgagcagctcctccaa
cagcatgcagccatcaaagatgagattgatgggcacaaaaatgactaccagaatgtcaag
gattctggggagaaggtgatccggggccagactgacccagagtaccagctcctgggccag
aggcttgaaggtgtgaacacaggctgggatgccctctgcaagatgtgggagaaccggggc
cagtttcttacccagtgccttggtttccaggagttccaaaaggatgccaaacaggcagaa
tcgatcctgagtaatcaggaatacactcttgctcacttggagcctccagattcattagaa
gctgcagaagctggaatccgtaagtttgaagatttcttagtgtccatggagaataaccaa
gataagatcttgaacactgtggactccgggaacaagcttgtcgatgagggaaacatatac
tctgacaaaatcaaggaaaaagtactgctgattgaggacagacacaagaaaaataatgag
aaatcccaggaagcagcagttctcctgagagacaacttggaccttcagaacttcctccaa
aactgtcaggagctcatcctctggatcaatgataagctactatcatctcaagatatttcc
tatgaagaagcccgaaacttgcacaataagtggcagaagcatcaagcattcatggcagaa
ctggcttccaaccaagaatggctggagaaagtggataaggagggaaggcagttgatagag
gaaaaaccacagttcacagatgtggtaacccagcggctgaggcagctgcaccggctctgg
gacgagctgcaggccaccacacaggagaaggcccaacatctctttgctgccagccgctca
gacctgcacgcccagacatatgccgacctcaacaaatggatcagcgccatggaggaccag
ctgcgatccgatgaccctggcaaagacctgactagtgttaaccggatgttgactaagttg
aagagagtggaggatcaagtgaatgtgaggaagaaggagctgggagagctgttatctcag
gtgcccccagtagggggtgaaggggacagtacagaaacaagcattgagaagcggttcttg
gaccttctggtgccgctgggtaagaggaagaaacaactggagtcatctagagccaaattg
caaatcaacagagacatagaagatgagatgctctgggtggaagagaggctgccacttgcc
caatcagctgactatggagctaatctacaaagtgtgcagctgctcatgaaaaaaaaccag
actctacagaatgaaattgtgggccatgcgccccgaatagaggatgtgttgcatcgaggg
cacgagctggtggaggtggctgagatagactgccaagacattgcagagcgcctggggcat
ctgcagggctcatgggaattgcttagagatgagaccgctggacggctgcagcggctacgg
gaggccaatgaggctcagcagtactacttggatgctggtgaggcagaagcctggatcagt
gaacaggaactttatgtaatctcggatgaaacgcccaaggatgaagagagtgccattgtg
atgctaaaacgacatctgcggcagcagcgctcagttgaggagtatgggaagaatatcaag
cagctggctggccgggctcagaaactcctgtctgctggtcatcctgagggtgaacagatt
atccgacttcaagggcaggtggacaaacaatatgccgggctgaaagatttggctgaggaa
cgcaaacgcaaactagaaaacatgtatcatttgttccagctgaagagagaggcggatgac
ttggaacagtggattgcagaaagggaggtggtagcctcttcccaagaaatggggcaagat
ttcgaccatgttactttgctgcgggacaagtttcgtgactttgcccgggaaactggggcg
attggacaagagagggtagacaatgttaacttgataattgagcagctcattgatgctggc
catgctgaggctgccaccattgctgagtggaaggatggactgaatgagatctgggctgat
ctactagagttaatagacactcgaatgcagctattagctgcttcctatgacctgcaccga
tatttctatatgggagaagagatccaaggcctcattgatgagaaacaccgggaattgcct
gaagatgtgggacttgacgccagtactgctgaatccttccaccgtgttcacacggcattt
gagcgagaattagatcaattaggagtacagatgcaccagttccgggacatggccactcgc
ctgcagacagcctatgccggagagaaggctgatgagatccagagcaaagagcaggaggtg
tctgcctcatggcaagcgctcctggctgcctgcacagggcgccgggcccagctggtggac
acagcagacaagttccgcttcttcagcatggtccgggacctcctctcttggatggaaagc
atcatccggcagatagaaacccaggagaagcccagggatgtatcttctgtggaactgctt
atgaaatatcaccaaggcatcaaggcagaaattgaaacccggagcaaaaatttcagcaca
tgccttgaattaggagaatcattgcttcagcggcagcaccaggcttccgaagagatcaag
gagaaactgaatcaggtgatgtcaaaaaggcaggagatgatgaagaaatgggacaaccgc
gcagagcggctacttctattgttggaagtgtgtcagttctctcgggatgcttctgtggct
gaagcgtggctgattgcccaagagccttacttggctagcagggactttggacatactgtg
gacagcgtggagaaacttatcaagagacatgaagcctttgagaagtccacagctccctgg
gctgagcgatttgctgctcttgaaaaactcaccacgcttgagctaaaagaactccagact
ccagagagacccacagaagacattggggctcaggaggaggaaggtgagacagcgggagag
cctcctcgggagttctatcgggcagctactgaaataacatcactggtcagttcccgctca
catttgtctagttccagggaatctgtgcagccagaccctatgtcctag
DBGET
integrated database retrieval system
