Sarcophilus harrisii (Tasmanian devil): 100918644
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Entry
100918644 CDS
T02286
Symbol
TMC6
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shr02000
]
100918644 (TMC6)
03037 Cilium and associated proteins [BR:
shr03037
]
100918644 (TMC6)
Transporters [BR:
shr02000
]
Other transporters
Pores ion channels [TC:
1
]
100918644 (TMC6)
Cilium and associated proteins [BR:
shr03037
]
Other cilia and associated proteins
Stereociliary proteins
100918644 (TMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
MAPEG
Motif
Other DBs
NCBI-GeneID:
100918644
NCBI-ProteinID:
XP_012404085
Ensembl:
ENSSHAG00000018281
UniProt:
G3X1M8
LinkDB
All DBs
Position
4:complement(301413408..301476954)
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AA seq
788 aa
AA seq
DB search
MSRTPSFVLPIPEGRESSSQDLSPYDESIVHDSFHQLIQEQSQRAEAESLELQEWPPRDK
GGGSQLHGAPQEYSSATLRILANMPSRTIGRSRGAIISQYYNQTVKLRRKNSRPLLRDMS
RSARPSIRQYDLEFDLTPREEEEKRSLLVEELQGLTITQRNHMLQNMPLSLTEKRCLRQD
IYIRRGRQRCYQISQTQLYCCSHLKYHCIIAFRSLWYGLLSGLYALKPWRYSLKQISGQF
GSSVLSYFLFLKTLVSFNILLLLLLLPFIVAVQVAFPPTSESSNFQSFTGLELFTGGGPF
THTVMYYGYYSNFTLNQPCSSHQSSDHCPANAVHLPYNMPLAYLFTIGFSFFITCITLVY
SMSRSFGKSYRVGSTLGVHAITVFCSWDYNVTQKWASRLQHDNIRTQLKELLAEWQLKQY
PRSVCGRLRQMTVLFLVWLLSLASVLGCAIAVYSFSEFMHENHEIRTETISEKLQEARLL
VLPLIVCIINLVVPYFYNVLAICEQHDSPVLEVYVAICRNLILKMVILGLLCYHWMGRKV
KSLEDQCWETFVGQELYRFMVMDFIFTLVDTLFGELVWRLISEKLKRDRKPEFDVARNVL
ELIYGQTLTWLGVLFSPLLPVIQVLKLLFLFYIKKISLMANCQAPRKPWRASHMTTIFIT
LLCFPSFLGAAIFLSYAIWQVRPSRNCGPFRTLDTIYEAGKVWIRRLEEASPSVTWFTWI
HQNLVENTFFIFLMSIVLLVAIYFNIQVVKGQRKVICLLKEHINNEGEDKIFLINKIHSI
YEKKAVHQ
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggaccccttctttcgtccttcccattcctgaaggcagggaaagctctagccag
gatctcagcccgtatgatgagagcattgtacacgactccttccatcagctcatccaggag
cagagtcagcgggctgaagctgaatctctggaactccaagagtggcctcctagggacaaa
ggtggaggttcccagctccacggggctcctcaggagtatagttcagccacacttcggatc
ctggccaacatgcccagtcgaaccattggtcgaagcaggggagccattatttcacagtac
tacaatcaaacagtcaaactaaggcggaaaaatagccgacccttgctgagagacatgtca
cgttctgcacgacccagtattcggcaatatgacttggaatttgacttgacccccagggaa
gaagaagagaagcggagtttgttggtggaggaactgcagggcctgacaataacacagagg
aaccacatgctgcagaacatgcccctgagcctgactgagaaacgctgcctccgacaggac
atctatattcgtagaggaagacagagatgctatcagatcagccagacccagttgtactgc
tgtagtcacctcaagtatcactgtatcatagctttccgcagcttgtggtatggtcttctc
tctggtctgtatgctctgaagccctggcgttactccctgaaacaaatcagtggccagttt
ggctctagtgtgctctcctacttccttttcctgaagaccttagtctccttcaacatcctg
ctcctcctcctcctgctgcccttcattgtggccgtacaggtggccttcccccccacttca
gagtcttctaacttccagtcattcacaggcctggagctcttcactggaggaggcccattc
acccacacagtgatgtactacggctactacagcaacttcaccttgaatcagccatgctct
tcccatcagagcagtgaccactgtcctgcaaatgcagtccatctgccatataatatgcct
ctggcctacctctttaccattggtttttccttctttatcacctgcatcactctggtatac
agcatgtctcgttcctttgggaagagctatcgggtgggcagtacacttggagtccacgcc
atcaccgtcttctgctcttgggactacaatgtcacccaaaaatgggcttcccgcctacaa
catgataacattaggacgcagttgaaggagctattggctgagtggcagctgaagcaatac
ccaagaagtgtgtgtgggagactgagacagatgacagtgctatttctggtgtggctgctg
tccctagcttctgtcctgggttgtgccattgctgtctactcattttcagagttcatgcat
gaaaaccatgagattaggactgagacgattagtgagaagctccaggaagcccgtctgctg
gttcttcccctcatagtctgcatcatcaacttggtggttccttatttctacaatgtccta
gccatctgtgagcagcatgattctcctgttttggaggtctatgtggctatttgcaggaac
ctgattctcaagatggttattttgggacttctctgttaccactggatggggcgtaaagtt
aaatcgctggaagaccagtgctgggagacatttgtggggcaggagctctaccgcttcatg
gtgatggactttatctttacgcttgtggacaccctctttggagagctggtctggaggctc
atttcagagaagctgaagcgggatcggaaaccagagtttgatgttgctcgaaatgtactg
gagttgatttatggacagaccctgacctggctgggtgttctcttctctcctcttctgcct
gtcatccaggttctcaagctcctgttcctgttctatatcaagaagatcagcctcatggca
aactgccaagcacctaggaaaccctggagagcttcacatatgaccactattttcatcact
ctcctctgcttcccctccttcttaggggcagccatattcctttcctatgccatctggcaa
gtgagaccctccagaaattgtggccccttccggaccttggacaccatctatgaggctggg
aaagtttggattcgtcgcctggaggaagccagtcccagtgttacttggtttacctggatt
caccagaatcttgtggaaaataccttttttattttcctgatgtcaattgtgcttctggtt
gcaatctatttcaatatccaggtggtgaagggacagcggaaagttatctgcctcctcaag
gaacatattaataatgagggagaagacaaaattttccttatcaacaaaattcactccatt
tatgagaagaaggcagtccaccaataa
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