Sarcophilus harrisii (Tasmanian devil): 100918861
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Entry
100918861 CDS
T02286
Symbol
PUF60
Name
(RefSeq) poly(U)-binding-splicing factor PUF60 isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100918861 (PUF60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shr03041
]
100918861 (PUF60)
Spliceosome [BR:
shr03041
]
Complex A
U2 snRNP components
U2 related factors
100918861 (PUF60)
Complex B
100918861 (PUF60)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
100918861
NCBI-ProteinID:
XP_003760563
Ensembl:
ENSSHAG00000006668
LinkDB
All DBs
Position
1:643992397..644026146
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AA seq
553 aa
AA seq
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MATATITLQVNGQQGGGPEPSAAGDKWKAPQGTDSIKMENGQSTAAKLGLPPLTPEQQEA
LQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAAVTMGFGDPLSPLQSMAAQRQRALA
IMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLA
LEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVF
EAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPP
MPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLATPGLVSPALTLAQPLGA
LPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFP
ESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEE
CGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMASETHKAIQALNGRWFAGRKVVAEV
YDQERFDNSDLSA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgaccattactctccaggtgaatggccagcaaggaggggggcccgagcca
tcggcagcgggagacaagtggaaagctccacagggcacagattccatcaaaatggaaaat
gggcagagcacagcagcaaagctggggctgccacccctcacacctgaacagcaggaggcc
ctccagaaggccaagaagtatgccatggagcagagcatcaagagtgtgttggtgaagcaa
accatcgcccaccagcagcagcagctcaccaacctccagatggcagcagtgacaatgggc
tttggagatcctctctcacctttgcaatcgatggcagctcaaaggcagagggcactggca
atcatgtgtcgggtgtatgtaggctccatctactatgagttgggagaagataccatccgc
caggcctttgccccttttgggcctatcaagagcatagacatgtcctgggactcagtcacc
atgaaacacaagggttttgcctttgtggaatatgaggttccagaagcagctcagttggcc
ttggagcagatgaactctgtgatgttaggaggaaggaatattaaggtgggtaggcccagt
aatatcggacaggctcagcccatcattgaccaactggctgaagaagccagagccttcaac
cgcatctacgtggcctcagtgcaccaggacctctcagacgatgacatcaagagtgtgttt
gaggcattcggcaagatcaagtcatgtactttggcccgggatccaaccacaggaaaacac
aaaggctatggattcattgagtatgaaaaggcccagtcctctcaagatgctgtttcatcc
atgaatctctttgacctggggggccagtaccttcgggtaggcaaggcagtcacaccaccc
atgcccctgcttacacctgccacgcctgggggccttccacctgcagctgctgtagcagca
gctgctgccacagccaagatcactgctcaggaagcagtggctggtgcagctgtactgggc
actctggctactcctgggttagtgtcaccagcactgactctggcccagccactaggggct
ctaccacaagctgtcatggcagctcaagctcctggagtcatcacaggtgttaccccggca
agaccccccatccctgtcaccattccttctgtgggagtggtgaaccccattctggctagt
cctccaacactaggcctcttggagcccaagaaggaaaaggaagaggaggaattgttccct
gagtcagagcggccagagatgctaagtgagcaggagcacatgagcatttcaggcagtagt
gcccgccacatggtcatgcaaaaactgctgcggaagcaggagtctacagtgatggttctg
cgaaacatggtggaccccaaagacattgatgatgacctggaaggggaagtgacagaggag
tgtggcaagtttggggctgtcaaccgtgtcatcatctatcaggaaaagcagggtgaggag
gaggacgctgaaattatagtcaagatctttgtggagttctccatggcctcagagacgcac
aaggctatccaggccctcaatggtcgttggtttgctggccgaaaggtggtggctgaggtt
tatgaccaagagcgctttgacaatagtgacctgtctgcgtga
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