Sarcophilus harrisii (Tasmanian devil): 100918909
Help
Entry
100918909 CDS
T02286
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100918909 (FUBP1)
03041 Spliceosome [BR:
shr03041
]
100918909 (FUBP1)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100918909 (FUBP1)
Spliceosome [BR:
shr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100918909 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Alginate_exp
SIMPL
Motif
Other DBs
NCBI-GeneID:
100918909
NCBI-ProteinID:
XP_031824689
Ensembl:
ENSSHAG00000005367
LinkDB
All DBs
Position
4:509057..534629
Genome browser
AA seq
698 aa
AA seq
DB search
MADYSTVPPPASGSGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGYGGQ
KRPLEDGDQPDAKKVAPQNDAFGTQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGEQIS
RIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGDGPG
NAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKV
QQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQND
AGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGRGRG
QGSWSMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNM
KLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGNPMGPY
NPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQNPPDPAKTGTDPNSAAWAAYYAHY
YQQQAQPPPAAPTGAPTTTQTNGQGDQQNPAPTGQVDYTKAWEEYYKKMGQQGQTQDYSK
AWEEYYKKQGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQCL
PRPSTLGSAPKSNRYIFKSTASMFTHSAEDPRIPNHSS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcagactactcaacggtcccccctcctgcctcgggctctggcggcggcggtggcggc
ggcggcggcgtcaatgacgcctttaaggacgcgctgcagcgagcgcggcagattgcagcc
aaaattggaggtgatgcaggcacatcactgaattcaaatgactatggttatgggggacaa
aaaagacctttggaggatggagatcagccagatgctaagaaggtcgctcctcagaatgat
gcctttggaacccagttaccgccaatgcatcagcaacaaaggtcggtaatgacagaagag
tacaaagttccagacggaatggttggattcataattggcagaggaggggagcagatctca
cgcatacaacaggagtctggatgcaaaatacagattgcccctgacagtggtggcctacct
gaaaggtcttgtatgctaactgggacccctgaatctgttcaatcagccaagcggttactc
gaccagatcgttgaaaagggaaggccagcccctggctttcatcatggggatggaccaggc
aatgctgttcaagaaatcatgatcccagccagcaaggctgggttagttattgggaaaggc
ggagagaccattaaacagcttcaggagcgagctggtgttaaaatggtgatgattcaggat
ggaccccaaaacacaggtgccgacaagcctctgaggatcacgggcgacccctacaaagtc
caacaagccaaggaaatggtgttggagttaatccgtgatcaagggggcttcagagaggtg
cggaatgaatatgggtcaagaataggaggaaatgaaggcatagatgtccctatcccaaga
tttgctgtaggaattgtgatcggcagaaatggcgaaatgatcaaaaagattcagaacgat
gccggggttaggatccagttcaagccggatgacgggaccaccccagaccgaatagcccag
atcacgggccctccggaccgatgtcagcatgcggcagagatcatcactgacctgcttcga
agcgtccaggccggcaaccctggtggaccaggacctggtggtcgtggccggggccggggc
caaggcagctggagcatggggccgcccggcgggctgcaggaattcaattttatcgttcca
actgggaaaactggactaatcataggaaaaggtggagaaacaatcaaaagcataagccaa
cagtctggtgctagaatagaactccagagaaaccccccaccaaacgcagaccccaacatg
aagttattcacaatacggggaactccccagcaaattgattacgcacggcaactcatcgag
gaaaagattggtggtccggttaaccccttaggtccacctgttccccatgggcctcatggt
gttcccggcccccatgggcctccaggacctccagggcctgggaatccgatggggccctac
aaccctgcaccttataacccaggaccgccaggccctgctcctcatggtcctccagctcca
tatgctccccaagggtggggaaatgcctatccccattggcagcagcagaacccacctgat
ccagcaaaaacaggtacagacccaaattctgcagcttgggctgcttattatgctcattat
tatcagcagcaagcacagccacctcctgcagctccaacaggtgcaccaactacaactcag
actaatggacaaggagatcagcaaaatccagctccaactggacaggttgattataccaag
gcttgggaagagtactacaaaaaaatgggtcaacaagggcagacacaggattattcaaag
gcttgggaggaatattacaagaagcaaggtcaagctgttcctgctcccactggagccccc
cccgggggccagcccgattacagtgcggcctgggccgaatactaccgccagcaggccgcg
tactatgcgcagaccagtccccaggggatgccgcagcacccaccagccccacagtgcctt
cccagaccttccaccttaggttctgctccaaaaagcaacagatacatattcaaaagtact
gcctccatgttcacacacagtgctgaagatccgcgaatacccaaccatagctcatag
DBGET
integrated database retrieval system
