Sarcophilus harrisii (Tasmanian devil): 100918926
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Entry
100918926 CDS
T02286
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100918926 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100918926 (CSTF3)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100918926 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
PRP6_TPR
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
100918926
NCBI-ProteinID:
XP_031797653
Ensembl:
ENSSHAG00000018128
LinkDB
All DBs
Position
6:complement(219153176..219228151)
Genome browser
AA seq
717 aa
AA seq
DB search
MSGDGAAEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLATIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVQVDELMEIFRRCKIPSSVDEAVRIIT
GGAPDLAVEGNGPMESSAVLTKAVKRPNEDSDEDEEKGAVVPPIHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgacggagccgccgagcaggctgctgaatatgtcccagaaaaagtgaagaaa
gcagaaaagaaattagaagagaatccatatgaccttgacgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacatatgaacgccttgttgcccag
ttccccagttctggcagattctggaaactgtacattgaagcagagattaaagctaaaaat
tatgacaaggttgaaaagttatttcagagatgccttatgaaggttttacatattgattta
tggaagtgttatctttcctatgtcagagaaaccaagggaaaactacccagctacaaagaa
aaaatggcacaagcatatgactttgctttggataaaattggaatggaaattatgtcttac
cagatttgggtggattacatcaatttcttgaaaggcgtggaagctgttgggtcctatgca
gaaaatcaaagaataacagctgtccggagagtttatcagcgaggttgtgttaatccaatg
atcaatattgagcaactttggagggactataataagtatgaagagggcatcaacatacat
ctagctaaaaaaatgattgaagataggagtagagattatatgaatgcacgacgtgtggca
aaggagtatgaaacagtaatgaaaggcttagaccgcaatgcgccttcagtacctccacag
aatactccccaagaagctcagcaagttgacatgtggaagaaatacatacagtgggaaaag
agcaatcctctccgaacagaagatcagacgctcataacaaaaagagtgatgtttgcatat
gagcagtgcctgctggtgctgggccatcacccggatatttggtacgaagctgcccagtac
ctggagcagtccagcaagctgctggctgagaaaggggacatgaacaatgctaaattattt
agtgatgaagctgctaacatatatgagagagcaattagcactttactgaagaaaaatatg
cttctttattttgcatatgcagattatgaagagagtcgaatgaaatatgaaaaggtgcat
agcatatacaatcgacttctagctattgaggatattgacccaactctggtatatatccag
tatatgaagtttgcaaggcgagcagaaggcatcaaatctggaagaatgatatttaaaaaa
gcaagagaggacactagaacacgccatcatgtctatgtcactgcagcattaatggaatac
tactgtagtaaggataaatcagtggcctttaagatttttgagctggggttaaaaaaatat
ggggacattccagaatatgtattagcctatattgactacctgtctcacctcaatgaggac
aataatacccgagttttgtttgaacgagtattgacttctggaagccttcctccggaaaaa
tctggagaaatatgggccagattcctcgcttttgaaagtaacattggtgatctagccagc
atcctgaaagtggagaaaagacgattcacagcattcaaggaagaatacgaaggcaaggaa
acagctcttctggtggacagatacaaattcatggacttgtatccctgctctgcaagtgaa
ctgaaggctctcggctacaaggacgtctcccgggccaagctggccaccattattccagac
cccgtggtggccccttccatagtgcccgttctcaaagatgaagtagacagaaaacccgaa
taccccaagccagacacccagcagatgattccctttcagccaagacatttagcacccccc
ggcttacaccctgtgcctggtggagtatttccggttccacctgctgctgtagttctaatg
aagctcctccctcctcccgtctgtttccagggtccttttgtgcaagttgatgaattgatg
gaaattttccgaagatgcaagatcccaagctctgttgatgaagccgtgaggatcatcact
gggggggccccggacctggccgtggaagggaacggccccatggagagcagcgccgtgctc
accaaagcggtcaagcggcccaacgaagactcggacgaggatgaggagaagggcgccgtg
gtgccgcccatccacgacatctaccgggcccggcagcagaagagaatccggtga
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integrated database retrieval system
