Sarcophilus harrisii (Tasmanian devil): 100919073
Help
Entry
100919073 CDS
T02286
Symbol
TFEB
Name
(RefSeq) transcription factor EB
KO
K15590
transcription factor EB
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04020
Calcium signaling pathway
shr04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100919073 (TFEB)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100919073 (TFEB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100919073 (TFEB)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
100919073 (TFEB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
100919073
NCBI-ProteinID:
XP_031820747
Ensembl:
ENSSHAG00000009705
UniProt:
G3W772
LinkDB
All DBs
Position
4:272033593..272112237
Genome browser
AA seq
476 aa
AA seq
DB search
MASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQQQLPGPPTPAINTPVHFQ
SPPPVPGEVLKVQSYLENPTSYHLQQSRDQKVREYLSETYGNKFAAHISPAQSSPKPPPA
ASPGVRASHVLSSSAGNSAPNSPMAMLNIGSNPERELDDVIDNIMRLDDVLGYINPEIQM
PNTLPLSSSHLTVYSGDPQVTASLVGVTSSSCPADLAQKRELTDAESRALAKERQKKDNH
NLIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQKDLQKSRDLEN
HSRRLEMTNKQLWLRIQELEMQARVHGLPTASPSGVNMAELAQQVVKQELPSEEGLGEPL
LPTAELPDQEPSLTLPPQPPPPPPPPLPPQSPYQLDFSQNLSFSGGEGPQGFPDPLGPEH
GSLFPSLSKKELDHLMLLDDTMLPLASDPLFSTMSPEASKASSRRSSFSMEEGDML
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcgaattggccttcggatgcagctcatgagggagcaggctcagcaggaggag
cagcgggagcgtatgcaacaacaggctgtgatgcattacatgcaacagcaacaacagcag
cagcagcagcagctgccaggaccccccaccccagccatcaacaccccagtgcacttccag
tccccacctcctgttccaggagaggtcctgaaggtacagtcatatttggaaaaccccact
agctaccatctgcaacagtcacgagaccagaaagtgcgggaatacttgtctgagacttat
gggaacaaatttgctgctcacatcagccctgctcagagctccccaaagcctcctccagct
gcttctcctggggtccgggccagccatgtgctctcttcctctgcaggcaatagtgccccc
aatagcccgatggctatgctcaatatcggctccaatccagagagggagctcgatgatgtt
attgacaacatcatgcgcttggatgacgtcctgggatacatcaatccagagattcagatg
cccaacacgttgcctctgtccagcagccatctgacagtgtacagtggagacccccaggtc
acggcctcccttgtaggtgtcactagcagctcctgccctgctgacttggcccagaagaga
gagctcacagatgctgagagccgagccttggccaaggaacgacagaagaaagacaatcac
aaccttattgaaagaagacgaagattcaacattaatgaccgaatcaaagaactgggcatg
ctgattcccaaggccaatgacctagatgtgcgctggaacaaggggactatcttgaaggct
tcagtcgattatattcgtcggatgcagaaggatctgcagaaatccagagacctggagaac
cactctcggcgccttgagatgacaaacaagcagttgtggcttcgcattcaggagctggag
atgcaggcccgagtccatggcttacctacagcttccccgtctggtgttaatatggcggaa
ttggcccagcaggtggtaaaacaagagctccccagtgaggagggcctgggggagcccttg
ctccccactgctgagctccctgaccaagagccctctctgaccctgcctcctcaaccccca
ccacccccacccccacccctgccgccgcagtctccataccaactggacttcagccaaaac
ttgagcttcagcgggggtgaggggccgcagggtttccctgaccccctgggacccgagcac
ggctccctcttcccctccctgtccaagaaagagctggaccatctgatgcttctggacgac
accatgttgcccttggcctccgaccccctcttctccaccatgtcacccgaggcctccaag
gccagcagccgccgtagcagcttcagcatggaggaaggggacatgctgtga
DBGET
integrated database retrieval system