Sarcophilus harrisii (Tasmanian devil): 100919300
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Entry
100919300 CDS
T02286
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013
Nucleocytoplasmic transport
shr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100919300 (PNN)
03015 mRNA surveillance pathway
100919300 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100919300 (PNN)
03041 Spliceosome [BR:
shr03041
]
100919300 (PNN)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100919300 (PNN)
Spliceosome [BR:
shr03041
]
Complex C
Other components
EJC/TREX
100919300 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
100919300
NCBI-ProteinID:
XP_031808815
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All DBs
Position
2:complement(338735010..338744201)
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AA seq
720 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDAEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNSKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNAMFEGRRNEFAEQINKMEARPRRQSMKEKEPQVVHN
EEQKAEQEEGKVAQREEEMEETGNQHNDVEIEDAGEEEEKEVGAVHSDAEKEQEEEHKKE
TEVKMEEENEIREKEKQQDSQPEEIMDVKEEGESVKNVDTETEEMETNQVESVDPSENEN
SKEIGPELEGEIQPNKEYKPISPVKENANANVPEIENESEEKQEIEPESQPEFVVQPQPQ
PQSQSQSQSHILPSLQLQPQSLPQSETLPLTLIEPLPQVMQEARHLTERKGFAIEPVKLP
EVQIEPVLSMPTERKTKTKTRSRSRGRARNKTSKSRSHSSSSSTSSSSSTSSSSGSSSSS
GSSSSRSSSSSSTSTSGSSSRDSSSSSTSSSESRSRSRGRGHNRDRKRRRSVDRKRRDTS
GLERSHNHKSSKGSSRDTKGSKDKSSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKRR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcagtgagaactttgcaggagcagctagaaaaagccaaggagagcttaaaa
aatgtagacgagaatatccgaaaactcacgggccgggatcctaatgacgtgagacccatc
caagctagattgctggccctctcaggccctggtggaggtaggggtcgaggtagtttattg
ctaaggcgtggattctcagatagtggaggaggacccccagccaaacagagagatcttgaa
ggggcagtcagtaggctgggaggagagcgtcggacaagaagagaatcacgccaagaaagc
gacgcagaggatgatgatgtcaaaaagccagcgttgcagtcttcagttgtagctacctcc
aaagagcgcacacgtcgagaccttattcaggatcaaaatatggatgaaaagggaaaacaa
aggaatcgacgtatatttggcttgttaatgggtacccttcagaaatttaagcaggaatca
actgtagctacagaaagacaaaagaggcgtcaagaaattgaacaaaagcttgaagtacaa
gcagaagaagaaagaaaacaagttgaaaatgaaaggagagaactttttgaagaaagacgt
gctaaacagacagaactgcgacttttggaacaaaaggttgaacttgctcagttgcaagaa
gaatggaatgagcataattctaagataattaaatatataagaactaaaacaaagccccat
ttgttctacattcctggaagaatgtgcccagctacacaaaagctgatagaagagtcacag
agaaaaatgaacgctatgtttgaaggtagacgcaatgaatttgctgaacaaataaataaa
atggaggctaggcctagaagacagtcaatgaaggaaaaagaacctcaggtggtgcataat
gaagaacagaaggcggagcaagaagagggtaaggtggctcagcgtgaggaagagatggag
gagacaggtaatcagcacaatgatgtagaaatagaggatgcaggagaggaagaggaaaaa
gaagtaggtgcagttcatagtgatgcagagaaagaacaggaggaggagcataaaaaggaa
actgaggttaaaatggaggaggagaatgagattagggaaaaagagaagcaacaggatagt
cagcctgaagaaattatggatgtgaaagaggagggagaaagtgtcaaaaatgtagataca
gaaacagaggaaatggaaactaatcaagttgaaagtgtagacccttcagaaaatgagaat
agcaaagaaataggaccagaattggaaggtgaaattcagccaaacaaagagtataaacct
atttctcctgtgaaggagaatgctaatgctaatgttccagaaattgaaaatgaatctgaa
gagaaacaagagatagaacctgagtcccaaccagagtttgtggttcaaccccaaccccaa
ccccagtcccagtcccagtctcagtctcatattctgccctcactccagctccagccccag
tccttgcctcagtctgagactttgcctttaacacttatagagccactacctcaggtcatg
caggaagcaaggcatctaactgagaggaaagggtttgctatagaacctgtcaaacttcct
gaggtacaaatagagccagtcttgtcaatgcctacggaaaggaaaaccaaaaccaaaacc
aggagcagaagcaggggtcgagccagaaacaaaactagcaagagtagaagtcatagcagt
agcagtagcacctcaagtagtagttcaactagtagtagtagtggcagcagctccagcagt
ggcagtagtagcagtcgaagtagttccagtagcagcactagcactagcggaagcagcagc
agagacagtagtagtagcagcacgagtagcagtgagagtaggagtcgaagccgaggtcgg
ggacataacagggatagaaagcgcaggaggagtgtggatcggaagcggagggatacatca
ggactagaaagaagtcacaatcacaagtcttcaaaaggtagtagcagagatacaaaagga
tcaaaggataagagttctcggtctgacagaaaaaggtctatatcagaaagtagtcggtca
ggcaaaagatcttcaagaagtgaaagagaccgtaaatcagacaggaaagacaaaaggcgt
taa
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