Sarcophilus harrisii (Tasmanian devil): 100919339
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Entry
100919339 CDS
T02286
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100919339 (SCAF8)
03041 Spliceosome [BR:
shr03041
]
100919339 (SCAF8)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100919339 (SCAF8)
Spliceosome [BR:
shr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100919339 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
Motif
Other DBs
NCBI-GeneID:
100919339
NCBI-ProteinID:
XP_012404879
Ensembl:
ENSSHAG00000009915
UniProt:
A0A7N4P8G9
LinkDB
All DBs
Position
4:complement(137016199..137112256)
Genome browser
AA seq
1272 aa
AA seq
DB search
MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLPSTAASMSNNTPGTPVTPVTPANVVQGLPDPWV
SQIANTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQ
LTAAAAAANPLNPLEQGVSFNKKLMDRFDFGEDSERGEEPKKETSSSQLSHVSESVNNSI
FHQLAEQLQQQNLEHLRQQLLEQQQPQKVTVTQENPESTFGSEHSASPSQGSSQQQFLEP
ETNLDDSIDIQQQDMELDEGQDVAEEIFEQEEKKVPIRSRSRTHSRSRSRSPRKRRSRSR
SGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTL
WVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSYRALQKLSSGSYKI
GSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLDGFAEGGMIDQETVNSEW
ETVKTSEPVKEPVQTVESPTTVEKTPVVTTQAEVYPPPVAMLPIPVAPAVPTVSLVPPTF
PVSMSVPPPGFSAIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPAIPPVVATSLVQPP
ISMTPETMKDVAFSNLVLPVGSVSSSLATSTMSAGSVYNPPNNQPEAEEKLSHLTDHQLS
SSESTRPVIHNDVSSSSGILGGQPPNMSSNSGMLGGQPPNVSSSSGILGVQPSNVSSSSG
MIGAQPPNIPSSSGILRPQLPNVSGSSGLLGVPPPNIPSNSGLLGVQPPNVPSNSGILGP
QPPTGPQNLPPLNIPGQRMPGIPMLDIRPGLIPQSPGPRFPLLQPGLPPQRGIPPPAILD
ASLHPPPRGPFAPGDIFSQSERPFPAPLRQNIDHIPNPEKRLPLGNDSIQQEGDRDYRFP
PIENRETINRPSPVDVRDVVGRPVDPREGPGRPPIDGREHFGRPHIDIRENLVRPGIDNL
GRRDHFGFNSDKPWGHRDFDEREHRVLPLYGGPKSFHEDRGRFRHGNFRFDPRSGPIWNR
GFGQDAHRDFDDRRRPWERQRDRDERDFDFCREINGNRFGRDRIQNTWVPHPHPRVFDYF
EGATSQRKADNVPQVNGENTETDNQPPPLQVQNDPELYEKLTSSSEINKEKNDTEADIES
EPVVESTETEGT
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaaaaccttcaacagcgaactctattccctgaatgactacaaaccacct
atttccaaggctaaaatgacacagattactaaggcagccatcaaagctattaagttctat
aaacacgtggtacagagtgttgagaaattcattcaaaagtgtaaaccagaatataaggtg
cctggactttatgttattgattccattgtacgacaatctcgacatcagtttggtcaagaa
aaggatgtttttgcacccagatttagtaataacatcattagcacttttcagaatttgtat
cgttgccctggtgacgacaagagtaaaatagtcagggttctaaacttatggcagaagaat
aatgtatttaagagtgaaattattcagcctcttcttgatatggcagcaggaattccacca
ccagttgtcacacctgttttgccaagtacagcagcatctatgagcaacaataccccagga
actcctgtgacacctgttactccagccaatgtagtacaaggtttgcctgacccttgggta
tctcagatagccaatacagatacactagctgctgtggcacagattttgcaaagtcctcaa
ggccagcagcttcaacaattaatacagacactacagattcaacagcagaaaccacagcct
tcactacttcaagcactggatgctggtcttgttgttcagttgcaagcattgacagcacaa
ctcacagctgcagctgcagcagccaatcctcttaatccactagaacaaggagtctctttt
aataagaagttgatggatagatttgattttggagaagattctgagcgtggtgaagaacct
aaaaaggaaacgtcatcttcccaactctctcatgtttcagaatctgtaaacaactcaatt
tttcatcaattagcagaacaactgcaacaacaaaatcttgagcatcttcgacaacagctc
ctagaacagcagcaacctcaaaaggtaactgttactcaagagaatccagaaagtacattt
ggttcagagcactctgcatcaccatcacagggaagtagccaacagcaattccttgaacct
gagacaaacttggatgattctatagatattcagcaacaggatatggagttagatgaaggg
caagatgttgctgaagagatctttgagcaagaagaaaagaaagtgcctattcgctctaga
tcaagaacacattcaagatctcggtcaagatcaccaagaaaacgaaggtccaggtcacgc
tctggttctcgaaagcgcaaacacagaaagcgatcacgttcacggtcaagagaaaggaaa
agaaaatcgtcccgttcctactctagtgaaagaagagccagggaaagggagaaagaaaga
cagaaaaaaggattgcctccaatccgatctaaaacattaagtgtttgtagtactactctc
tgggttggtcaagtagataagaaagctacacagcaagatttaaccaatctttttgaagaa
tttggacagattgaatccatcaatatgattcctccaagaggctgtgcctatgtttgtatg
gttcatagacaagattcttatcgggcacttcagaaacttagttctggatcttacaaaatt
ggatccaaagttataaagattgcttgggctttaaataaaggtgtaaaaacagagtacaaa
caattttgggatgtagatcttggagttacctatataccatgggagaaagtaaaggtggat
gacctagatggctttgctgaaggaggcatgattgatcaggagactgtgaatagtgaatgg
gaaactgtgaagacttcagagcctgtcaaagaacctgtccaaactgtagagagtccaaca
acagttgaaaagacaccagtggttactacacaagctgaagtttatcctccacctgttgct
atgttgccgattccagtagcaccagctgtacctactgttagtttagttccaccaacattt
ccagtgtcaatgtccgtgcctcctccaggatttagtgcaattcctccacctcctttctta
agagcaagtttcaacccatcacaaccacctcctggtttcatgccacccccagttccacca
cctgttgtgccaccccctgctattcctccagtagtagcaacatctctggtacagcctcca
atatctatgactccagagacaatgaaagatgttgcttttagtaaccttgttttgccagtt
ggctctgtgtctagcagtcttgctacttcaactatgtcagctggaagtgtttataatcca
ccaaataaccagcctgaggcagaagaaaaattatcacacctcacagaccaccagctttct
tccagtgaaagtaccagaccagtgatccacaatgatgtctcaagtagctctggaattcta
ggtggacagccaccaaacatgtcaagcaattctgggatgttgggtggacagccaccaaat
gtatcaagcagttctggaattctgggagtacagccatctaatgtttccagtagttctgga
atgattggagcacagccaccaaatattccaagtagttccggaattctgagaccacaatta
cccaatgtgtcaggtagctctggactcttaggggtaccacccccaaatattcctagcaat
tctggactcctgggagttcagccaccaaatgttccaagtaattctggaattctgggacca
cagccaccaactgggcctcaaaacttgcccccattaaatattcctggtcagcggatgcct
ggaataccaatgttagatattcgtccaggacttataccacaatctcctgggccaagattc
cctttattgcagcctggacttccaccacaaagaggaatccctcctcctgcaatccttgat
gcatctcttcatcctccacctcgtggtccttttgctccaggagatattttcagtcagtca
gaaagaccttttccagctcctttaagacaaaatatagatcatatccctaatccagaaaaa
aggctaccacttgggaatgatagtattcaacaggaaggagatagagattatcgttttcct
cctatagaaaacagggagaccattaataggccttcaccagtggatgttagggacgtagtg
gggcgacctgtagatccaagagaaggtccaggaagacctccaatagatggaagggaacac
tttggaagaccacatatagatataagagaaaatcttgtaagaccaggtatagataacctt
ggtcgaagagaccactttggttttaattcagataagccttggggtcatagagattttgat
gaaagagagcatcgtgttttacctctctatggtggtcctaaaagcttccatgaagaccga
ggtagatttagacatggaaattttaggtttgatcctagaagtggtcctatttggaacaga
ggatttggacaggatgctcacagagattttgatgaccgcagaagaccctgggagagacaa
agggatagagatgaaagagattttgatttctgcagagaaattaatggaaatcgttttgga
agagacagaattcagaacacctgggtcccacatccacacccccgagtttttgattatttt
gaaggggccacttctcaacgaaaagctgataatgtaccccaggtaaatggtgaaaataca
gagacagataatcaaccaccacctttacaagtacagaatgatcctgaactttatgaaaaa
ctgacatcttcaagtgaaataaacaaagagaagaatgacacagaagctgatatagaaagt
gaaccagtggtagaaagcacagaaactgaggggacataa
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