Sarcophilus harrisii (Tasmanian devil): 100919460
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Entry
100919460 CDS
T02286
Symbol
SOGA1
Name
(RefSeq) protein SOGA1 isoform X2
KO
K27704
microtubule cross-linking factor
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100919460 (SOGA1)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
100919460 (SOGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TSC22
Motif
Other DBs
NCBI-GeneID:
100919460
NCBI-ProteinID:
XP_023362974
Ensembl:
ENSSHAG00000010287
LinkDB
All DBs
Position
2:complement(423567183..423683946)
Genome browser
AA seq
1703 aa
AA seq
DB search
MEAAEPDPGRGSPPPPPPPPPLPPPSPAPPEKKKINRAPSPARPKDVPGWSLAKSRRSSG
SNPGSPASLSGKAGPGQPRPEKKGRSGPQTGARGSGKGAPGRAGAKAKGRPRDEPPGRAS
QPPLLPQPPPALSLTDSSSEVSDCTSEENKLLSLELALSSDTESGGGSGSGSGSGRERPA
GSGAGAGSGVRVQGHPAPRSPQPRLASPGASPVPDEQSASLGSSRLPLSTSLAFSDLTEE
LLDCGPDGFVRELEELRSENDYLKDEIEELRAEMLEMRDVYMEEDVYQLQELRQQLDQAS
KTCRILQYRLRKAERRSLRVAQTGQVDGELIHSLEQDVKVSKDISVRLHNELEAVEKKRI
RLEEENEDLRQRLIEAELAKQVLQHEMDKPREHSLKKRGTRSLGKTEKKASVQEDNADLK
CQLHFAKEESALMCKKLTKLAKENDSMKEELVKYRSLYGDLDSSLSVEELADSPHSREAE
LKVHLKLVEEEANILSRRIVELEVENRGLRAEMEDTKGQGDKDYIGPDIRFAFSSPNCGG
ESGESLAELRRHLQFVEEEAELLRRSSAELEDQNKLLMNELNKYKSEHDLDVTLSEDSCS
VISEPSQEELATAKIQISELSGKVKKLQYENRVLLSNLQRCDLASCQTLRPMLETDAEAG
DSAQCVPTPLWRDVPVGGENGVLGHSERTADNGVPKLPDTHLAKLFKARDLEALPGLRDQ
AALVSKAIDVLISDANGFISSLKLCLDNDCADLMLNESLDNSESPSDSKLINVIFMRLGL
LQQELNIFMRKVDSIGDSLKEATETSSLPAPGAQDPSKDLLSKEHTSDFQIKELQLVLSE
AHESLRGLQEQLSQERQLRKEDAENFNQKIFQLKEDQQKTLLRREFELQSVNLQRRLEQK
FWSQEKNLLVQESQQFKQNFLLLFMKLKWFLKRWRQGKILPSEGGDFLEVNSMKELYLLM
EEEELSPQHSDNKSCVADIWTQNTPNEYVKTLADMKIILKELCRELREERRGMNELQQQF
AKAKSAWEMEKTELKCHLAQLELKPGKGVGERALPDWKAILKREREEHQHLLAESYSAVM
DLTKQLQISEKNWDQQKIELLDRFKDEKQQAEQQVKELQNKISQLQKGADSWALKHIDME
KHDSSWKETLSEKIHDKETISEADANGTSLKRTKSVSSMSEFESLLDCSPYLPGKSANIV
NETSRGKKTSPPASLLPNTLMDTATVNPARIAFVDNEQASPEKGTKEKLGLSPRDCNRRG
NLGYQDCAQKQMQRSYTAPDKTGIRIYYSPPVARRLGVPLVQNKEGKILIEPGFLFTMAK
PKESAESEGLAESTYGRWLCNFSKHRELLDNSPVSSSTAPVPNFPSALHDFEMSGNMSDD
MKEITNCVRQAIRSGSLERKVKSMSSQTVGLTSVGTQTIQTVSIGLQTDLPRGSLHGKSW
SPRSSSLVSVRSKQISSSLEKVHSRIERPCCSPKYGSPKLQRRSVSKLDSSKDRSLWNLH
QSKQNGSAWARSTTTRDSPVLSNINDGLSSLFNVVEHSGSTESIWKPGSQETRTKPETHK
YGIVQEFFRNVCGRSQSPTSGTDRKEVMGDECTKKPEPLSPASYHQSEGIARILSKKTPK
LSTCEEVRPALLSQGGKDGNPRDLDGNLTVANEDAMCDCSAQSLTSCFARPSRSITRHSP
SKCRLHPPETIRGGEERTASSSE
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcggagccggatcccggtaggggctcgccgcccccgccgccgcccccgccc
cccctgccgcccccttcccctgcacccccggagaagaagaagatcaaccgtgctccgtcg
cctgctagacccaaggacgtccccggctggtcgctggccaagagccggcggagcagcggc
agcaacccgggctctcctgcctctctgtccgggaaggcggggcccggccagccccggccc
gagaagaaaggccgcagcggcccacagaccggcgctcggggctcggggaagggcgcgccg
ggccgagccggggctaaggcgaaggggcgtccccgcgacgagcccccggggcgggcctcg
cagccgccactgctgccccagccgccgccggccctgagcctcacggacagcagctccgag
gtgtcggactgcacctccgaggagaacaagctgctgtccctggagctggctctgagcagc
gacaccgagtccggcggcggcagcggcagcggcagcggcagcgggagggagcgacccgcc
gggagcggggccggagctgggtccggggtccgcgtgcaggggcacccggcgccgcgcagc
cctcagccacggctcgcctccccgggcgcctcgcctgtcccggatgagcagtcagcgtcg
ctgggcagcagccgcctgcccctcagtacgtcgctggccttctccgatctcaccgaggag
ctactggactgcgggcccgatggcttcgtgcgggagctagaggagctgcgctccgagaac
gattacctgaaggatgagatcgaagagctacgagctgagatgctggagatgcgagatgtc
tacatggaagaggatgtgtatcagctacaggagctccgacagcaactggaccaagccagc
aagacctgtcgcatcctgcagtaccgtctccgcaaggcagaacggcgcagcctccgagtg
gctcagacaggccaggtggatggggaactcattcatagcttggagcaggatgtcaaggtt
tccaaagacatctctgtgcgtctgcataatgaattggaggctgtggaaaagaagagaatc
cgattggaagaggagaacgaagatctccgacagaggttgatcgaggcagagctggccaaa
caagtgctccagcatgagatggacaaacctcgcgagcattctttgaagaaaagaggaacg
cggtcacttggaaagacagaaaaaaaggcatcagtccaggaggataacgcggacctaaag
tgtcagctgcactttgccaaggaagagtcagccctgatgtgtaagaaactcactaagtta
gccaaggagaatgacagcatgaaggaggagttggttaagtaccgctctctgtatggagac
ttggacagctccctgtccgtggaggagctggctgactcccctcactccagggaggctgag
ctgaaggtccatctgaagcttgtcgaggaagaagccaacatcttgagccgccggattgtg
gagctggaggtagaaaaccggggcctgagagcggagatggaagacacgaaagggcagggg
gacaaggactacattggccctgacatacggttcgctttttcttcccccaattgtgggggg
gagtccggtgagagcctggctgagctgcggcgacaccttcagtttgtggaagaggaagcc
gagctcctgaggaggtcttctgccgagctggaggaccagaacaagctcctcatgaacgag
ctgaacaagtacaagtcagaacacgacttggacgtcaccttgtctgaggacagctgctcg
gtgatcagcgagccgtctcaggaggagctggccaccgccaagatccagatcagcgagctc
agcgggaaggtgaagaaactgcagtacgagaaccgcgtcctgctctccaaccttcagcgc
tgtgacctggcctcctgtcagaccctgcggcccatgctggagaccgatgccgaggcgggg
gactctgcccagtgtgtccccacccccctctggagagatgtgcctgtcgggggggagaac
ggtgtcctaggccactccgagaggacggcagacaacggcgttccgaagctccctgacacc
catctcgccaagctctttaaagccagagacttggaggctttgcctggcctcagggaccag
gctgccctggtcagcaaggcgatcgatgttttaatttcagatgccaacggcttcatatcc
agtctcaagctgtgtctggacaatgactgtgcagaccttatgttgaatgagtccctggat
aacagcgagagccctagtgattccaaacttatcaatgttatcttcatgaggcttgggctc
ttgcagcaggagctgaacatcttcatgaggaaagtggatagcattggggactctctgaaa
gaggccacggaaacctcctcactgccagcccccggggcccaggacccctccaaagacctt
ctcagcaaagaacacacttctgacttccagatcaaagaactacaactggtgctttcagaa
gcccatgagagtcttcgaggtcttcaagaacaactctcccaagagaggcagctgcgtaaa
gaagatgcagagaatttcaatcaaaaaatattccagctgaaggaagatcaacagaagact
ctcctgaggagggagtttgaactgcagagtgtgaacctccagaggaggctggagcaaaag
ttctggagccaggagaagaacctcctggtacaggaatcccaacagttcaagcagaacttc
ctactgcttttcatgaagcttaagtggttcctcaaacgctggagacaaggaaagatctta
cccagtgagggaggtgactttctggaggtgaatagcatgaaggaactctacctgctaatg
gaagaggaagagctaagtcctcagcattctgacaataagtcctgtgtggcggacatctgg
acgcagaacactcccaatgaatatgtgaaaacactcgcagacatgaagatcatcctgaaa
gagctgtgccgagagcttcgggaagaacggcggggtatgaatgagcttcagcagcagttt
gctaaggctaagtctgcctgggaaatggagaagactgagctcaagtgccacctagcacag
ctggaactaaaacctgggaagggagtgggtgagcgagccctgcctgactggaaggccatc
ctgaaaagagaaagggaggaacaccagcacctcttggctgagtcctatagtgcagtcatg
gaccttaccaaacagctgcaaatcagtgagaagaactgggaccaacagaagatagaactg
ctggacaggttcaaagatgaaaaacaacaggccgagcaacaggtgaaggagctgcagaat
aaaataagccagttacagaagggagctgattcctgggctttgaaacatattgacatggaa
aagcatgacagcagctggaaagagaccctcagtgagaagatacatgacaaagagaccatt
tctgaagctgatgccaatggaaccagtttaaagaggaccaaatctgtttcttccatgtct
gagtttgaaagtttacttgactgttctccttaccttccgggcaaatcagccaacatagtc
aacgaaacttcccgaggcaaaaagacctctccacctgcctccctattgcccaatactctg
atggatactgctacggtgaaccctgccagaattgcctttgtagacaatgaacaggcaagc
ccagaaaaggggaccaaggagaagctggggctctcccctagagactgcaacaggagaggt
aacctgggctaccaagattgtgcccaaaaacagatgcagaggagttacacagctcctgat
aaaacaggcattcggatttactacagcccacctgtggctcgtaggctgggggtccctctg
gtccagaataaagaagggaaaattctcattgaacctggcttcctctttaccatggccaag
cccaaagagtcagcggagtcagaaggcttggctgagagtacatatggtcggtggctgtgt
aacttctccaaacaccgggaacttttggacaatagcccagtcagcagttctacagctcct
gtgcccaattttccctctgctctacatgactttgagatgtcaggcaacatgagtgatgac
atgaaagaaatcaccaactgtgtccgccaggccatccgctccggctctctggagaggaaa
gtgaaaagcatgtcaagccagacagtggggctaacaagtgtgggcacccagactatccag
acagtgagtattggtcttcagactgacttgcctcggggaagcctgcatggcaagagctgg
tcaccccgtagctcttctctggtatctgtccgaagcaaacagatatcttcttcactggag
aaagtccactctcggattgaaagaccttgttgttctcctaaatatgggtcaccaaaactt
cagaggagatccgtgtccaaactagatagctctaaggaccgaagtttatggaatcttcac
caaagtaagcaaaatgggtcagcttgggccaggtctaccacaacccgagacagcccagtc
ttaagcaacattaatgatggactatctagtttgttcaatgtagtagagcactctgggagc
actgagtctatctggaagccagggagccaggagacccgcaccaaaccagagactcacaag
tatggcattgtccaggagttctttcgtaatgtatgtggtcgttcacagagtcccacttct
gggacagatcggaaagaagtgatgggagatgagtgcaccaaaaagccggagcctctttcc
ccagcaagttaccatcaatctgagggcattgccaggattttgagcaagaaaactccaaaa
ttgagcacctgtgaggaggtcagaccagctttactctcccaagggggtaaggatggaaac
cctcgagatctagatggcaatttgactgtggctaatgaggatgccatgtgtgactgcagt
gcccagtccctgacctcttgctttgctcggccttcccgatccatcaccaggcattcgccc
tctaaatgcagactacatccccctgagaccatccggggaggggaagagagaacagcttct
tccagcgaatga
DBGET
integrated database retrieval system