Sarcophilus harrisii (Tasmanian devil): 100919529
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Entry
100919529 CDS
T02286
Symbol
RBM17
Name
(RefSeq) splicing factor 45 isoform X1
KO
K12840
splicing factor 45
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100919529 (RBM17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shr03041
]
100919529 (RBM17)
Spliceosome [BR:
shr03041
]
Complex A
U2 snRNP components
U2 related factors
100919529 (RBM17)
Complex B
100919529 (RBM17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Motif
Other DBs
NCBI-GeneID:
100919529
NCBI-ProteinID:
XP_031794360
Ensembl:
ENSSHAG00000012480
UniProt:
G3WGR4
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All DBs
Position
5:122262394..122302144
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AA seq
403 aa
AA seq
DB search
MSLYDDLGVETSDSKTEGWSKNFKLLQSQLQVKKAALTQAKVKSQRTKQSTVLAPVIDLK
RGSSSDDRQIVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYEKVVKRQREE
RQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPP
TSLVEKDKELPREFPFEEESRPRSQSSKAAIPPPVYDEQERPRSPTGPSNSFLANMGGTV
AHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKDASKKSDSNPLTE
ILKCPTKVVLLRNMVGAGEVDEDLEGETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLE
FERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLAEQV
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgtatgatgacctgggagtggagaccagtgattcaaaaacagaaggctggtcc
aaaaatttcaaactgctacagtctcagttgcaagtcaagaaggcagctttaacccaagca
aaggtaaagagtcagaggacaaaacaaagtacagtccttgctccagtgattgatttgaaa
cgagggagttcttcagatgaccggcagattgtagataccccacctcatgtagcagcaggc
ttaaaggatcctgtgcctagtggattttctgcaggagaagttttgattccattagctgat
gaatatgatcccatgtttcctaatgattatgagaaagtagtaaaacgccaaagggaggaa
cgccaaagacagcgggagctggaaaggcaaaaagagattgaagaaagagaaaagaggcgt
aaagacaggcatgaagctagtgggttttcgcgacgaccagatccagattctgatgaagat
gaagattatgaacgagaaaggaggaaaagaagtatgggaggtgctgccattgcaccacca
acttctctcgtggaaaaagacaaagaattacccagagagtttccatttgaagaggagtca
agacctcgttcacagtcttccaaagctgctattcctccccctgtgtatgatgaacaagag
agaccacgatccccaacagggcccagtaattccttccttgctaatatgggtggtaccgtt
gctcataaaatcatgcagaagtacggcttccgagaaggccagggtcttggaaaacatgag
caaggattgagcacagcattgtcagttgaaaagacaagtaagcgaggtggcaagatcatt
gttggtgatgctacagagaaagatgcatcgaagaaatcagattcaaatccattaaccgag
atccttaaatgtcctactaaagtggttctgctaaggaacatggtgggtgctggagaagta
gatgaagatctagaaggtgaaaccaaggaagaatgtgaaaaatatggcaaagttggaaaa
tgtgtaatttttgaaattcctggtgctcctgatgatgaagctgtacgaatatttttagag
tttgaaagggttgaatcagcaattaaagctgttgttgatctgaatgggaggtattttggt
ggacgggtagtgaaagcttgtttctacaacttggataaattcagagtcttggatctggca
gagcaagtctga
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