Sarcophilus harrisii (Tasmanian devil): 100919816
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Entry
100919816 CDS
T02286
Name
(RefSeq) protocadherin beta-2-like
KO
K16494
protocadherin beta
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100919816
Cell adhesion molecules [BR:
shr04515
]
Cadherins
Protocadherins
100919816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Big_9
InlK_D3
He_PIG
Motif
Other DBs
NCBI-GeneID:
100919816
NCBI-ProteinID:
XP_003756706
Ensembl:
ENSSHAG00000007899
LinkDB
All DBs
Position
2:373946756..373949703
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AA seq
790 aa
AA seq
DB search
MEQEGATIPQQRQVLFLLVLLGVSGTASKPQQFSVVEEMERGTFVANVAKVLGLEVGELS
DRGTRVVFKGNKEYLQLNRRTGDLLLRETLDREELCGPSDPCVLPFKILLENPFQIVPAE
LSVLDINDHSPVFLKSEMLLKIPESALPGTVFLLENGKDLDVGSNSIQNYTISPNSLFHI
QIRDNSEGKRYPELVLDETLDREKQSEVILTLTAVDGGVPPRSGTAQVRILIVDINDNAP
VFAQLRYEVQIPENSPIGSKVVTVSATDLDAGNNGEISYAFLHASESIHKTFHLKEELGE
LYLKEKVDFESTQFYTINIQATDGGGLSAECTVIVQVIDLNDNPPELTISSLTSPIPENS
PETVVAVFSVSDLDSGENGKMVCSIQDDLPFSLKPSIENYYMLVTEGALDREYKAEYNIT
ITVMDLGFPKLKSEYNLTVFISDVNDNSPVFTQRAYTLYLQENNSPALHIGSVSASDRDS
GINAKITYSLLPPETGELPIFSYISINSDNGHLYALRSLDYEAIQTFQFTVRAADGGSPS
LSSQVLVQIVVQDENDNSPFVLYPLQNGTAPCNDLVPRTAEPGYLVTKVVAVDRDWGQNS
WLSYQLLKATDPGLFTLWAHNGEVHTARPISDKDAIKQRLVVLVKDNGQPPLSTMATINV
FLVDGFSEPYLQLPDAPKEQIQTDSLTTYLVISLTSVSFLFLASVIVFIAIRLWKRKKHT
TDISRFTLNDLFPGHLVDVSRTGTLSQSYQYEVCLASSSGSNEFKFLKPVIPTLPTLEGN
EDSIENGLKE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggaaggggcgacgattccgcaacaaaggcaagttctctttctccttgttctt
ctgggtgtgtctgggactgcctccaagccgcagcagttttctgtagtggaggagatggag
aggggcacctttgtggccaatgtagcaaaggttcttggcctggaagtgggggaactgtca
gatcgcgggaccagagtcgttttcaaagggaacaaagagtatttgcagctgaaccgtaga
actggggatctgctcttgagagagacactggatcgggaggagctgtgcggcccctctgat
ccctgtgtgctcccttttaagatcttgttggaaaacccctttcagattgttccggctgaa
ttaagtgtgctggacattaatgatcattcgccagtgttcctaaaatctgagatgctccta
aaaatcccagagagcgccttgcctgggactgtgtttttgctagaaaatgggaaggattta
gatgtaggaagcaacagtatacagaactacacaatcagtcccaactcccttttccatatt
caaattcgagataacagtgagggcaagcgatacccagagcttgtactggatgaaacgctg
gatcgggagaagcagtctgaggtcattttaactctcactgcagtggatgggggagtccca
ccaaggtctggaactgcccaagtccgaattctcatagtggatatcaatgataacgcccca
gtgtttgctcagctgcgttatgaggttcagatccctgagaatagtcccattggatccaaa
gttgtcacagtttctgccacagatttagatgcagggaataatggagaaatatcttacgct
tttttgcatgcctctgaaagcattcacaaaacatttcatcttaaagaggaattaggagaa
ctttatttaaaggaaaaagtggattttgagtcgactcagttttacactataaatatccag
gccacagatggtggaggcctttccgcagaatgtactgttattgttcaggtgatagatctg
aacgacaatcctccagagctgactatatcttcacttaccagccccatcccagagaattct
cctgagacagtggtagctgtcttcagtgtttcagatctggattctggggaaaatggaaag
atggtttgttccatccaagatgatcttcccttttccctgaaaccttccattgaaaactac
tacatgttggtaacagaaggagcactggacagagagtacaaagctgagtacaatatcact
attacagtgatggacttgggattcccgaagcttaaatctgaatataatctcacagttttc
atctccgatgtcaatgataactctccagtttttactcagagagcctacacattgtacctg
caagagaacaacagtcctgccctccacattggcagtgtcagtgccagtgacagggactca
ggaatcaatgccaaaatcacctattctctgctgcctccagaaactggagaactgcccatc
ttctcctatatctctatcaactcagacaatggccatctctatgctttgcgatccctggat
tatgaagccatccaaactttccagttcactgtgagggcagctgatggtggttctccatca
ctgagtagccaagttctggttcagattgtggtacaggatgaaaatgataactctcccttt
gttctgtaccccttgcaaaatggcacagctccctgcaatgatctggtgcccagaactgca
gagccaggttatctggtgaccaaggtggtagctgtggatagagactgggggcagaattcc
tggctttcttatcagctgctcaaggccacagacccgggcctattcactttgtgggcccac
aatggggaagttcacacagcaagacccatcagtgacaaagatgccattaagcagaggctt
gtggtgctggtgaaggacaatgggcaaccacctctgtccacaatggccacaataaatgta
ttcttggtggatggcttttctgagccctacctgcagttacctgatgcacctaaggagcag
atccagactgactccctaactacctacctagtcatttccctgacctctgtttcctttctc
ttcctggcctctgttattgtgtttattgccattcgcctgtggaaaaggaagaaacatacc
actgacattagtcgctttactttaaatgacctcttcccaggccacttagtggatgtcagc
aggacaggaactttgtcccagagttaccagtatgaggtgtgtctggccagtagctcagga
agcaatgaatttaagttcctaaagcctgttattcccacccttccaactttggaaggaaat
gaagactcaattgaaaacggccttaaggaatag
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