Sarcophilus harrisii (Tasmanian devil): 100919823
Help
Entry
100919823 CDS
T02286
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100919823 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shr03041
]
100919823 (USP39)
Spliceosome [BR:
shr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
100919823 (USP39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100919823
NCBI-ProteinID:
XP_031805644
Ensembl:
ENSSHAG00000016049
LinkDB
All DBs
Position
2:30551203..30584329
Genome browser
AA seq
571 aa
AA seq
DB search
MSSRTKRETRSSARGKRDAESRSSSSRSKRDRDSEGTGSRGSPVRVKRERNSEPAARDYS
SGSVPARVPAPLLPGTRVKREREADEDSEPEREVRVRYGRLDSEDRRSRHCPYLDTINRS
VLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYC
LPDNYEIIDSSLEDITYVLKPTFTKQQISNLDKQAKLSRAYDGTTYLPGIVGLNNIKAND
YANAVLQALSNVPPLRNYFLEEENYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHV
SPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMR
IFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVP
LFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFP
ITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPTEGSYRIHVLHHGTGKWYELQDLQV
TDILPQMITLSEAYIQIWKRRDSDETNQQGA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccgtacgaaaagggagacgcggagctccgcccggggcaagcgggatgcggag
tcccggagcagctcgagtcggtcgaagcgggatcgggattcggagggcacagggtctcgg
gggagtccggtgcgcgtaaagcgggaacggaactcggagccggcggcgcgggattactcg
agcgggagcgtgcccgcgcgcgtgcccgcgccgctgctaccggggacgcgcgtgaagcgg
gagcgcgaggccgacgaggactcggagccggagcgggaggtgcgagtgcgatatggacgc
ttagactctgaggatcgaaggagccgccattgcccctacctggataccattaacaggagc
gtcctagactttgactttgaaaaactctgctccatttcgctttcacacatcaatgcatat
gcctgcctggtgtgtggcaagtactttcagggacgagggttgaagtctcatgcctacatt
catagtgtccagttcagccaccatgttttccttaacctgcacaccctcaagttttactgc
cttccagacaactatgaaatcattgactcctcactggaagacatcacttacgtcttgaag
cccacattcaccaagcagcagatttccaacctggacaaacaggccaagctgtctcgggct
tatgatgggaccacctatctgcctggtatcgtggggctgaataacatcaaggctaacgac
tacgccaatgccgtgctgcaggctttgtctaatgtcccacctctccgcaactacttcctt
gaagaggagaactacaagaatatcaaacgtcctcctggggacatcatgttcttattggtg
cagcgttttggagaactgatgaggaagctgtggaatcctcgaaatttcaaggcacacgtt
tctccccatgagatgcttcaggccgtcgttctgtgcagcaagaaaacttttcagatcact
aagcaaggtgatggggtagactttctttcctggttcctgaatgccttacactcagctctg
ggtgggacaaagaagaaaaagaagactattgtgacggatgttttccaggggtccatgaga
atcttcactaagaaattgccacacccagatctgccagcagaggagaaagagcagttactg
cataatgatgaataccaggagacaatggttgagtcgacttttatgtacttgaccttggac
cttcccactgctccactttacaaggatgagaaggagcaactcatcatcccccaggtgcca
ctcttcaacatcttggctaagttcaatggcatcactgaaaaggaatacaagacgtacaag
gagaactttctgaagcgtttccagctcaccaagctgcccccatatcttatcttttgtatt
aaaaggttcaccaagaacaacttctttgtggagaagaacccgaccattgtcaactttccc
atcacaaatgtggacctgagggaatacctgtccgaggaagtgcaggccgtgcacaagaac
accacctacgacctcatcgctaacatcgtgcacgatgggaaacctactgagggctcctac
cggatccacgtgcttcaccatgggacaggaaagtggtatgaactccaggatctgcaggtc
actgacatccttccccagatgatcacactttcagaggcctacatccagatctggaagaga
cgggacagcgacgagaccaaccagcagggggcatga
DBGET
integrated database retrieval system
