Sarcophilus harrisii (Tasmanian devil): 100919901
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Entry
100919901 CDS
T02286
Symbol
TFE3
Name
(RefSeq) transcription factor E3 isoform X3
KO
K09105
transcription factor E3
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04137
Mitophagy - animal
shr04142
Lysosome biogenesis
shr05202
Transcriptional misregulation in cancer
shr05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
100919901 (TFE3)
04137 Mitophagy - animal
100919901 (TFE3)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100919901 (TFE3)
09162 Cancer: specific types
05211 Renal cell carcinoma
100919901 (TFE3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100919901 (TFE3)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
100919901 (TFE3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
HLH
DUF3371
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
100919901
NCBI-ProteinID:
XP_012408888
Ensembl:
ENSSHAG00000003327
LinkDB
All DBs
Position
X:complement(82214773..82221438)
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AA seq
551 aa
AA seq
DB search
MSVSMSVSGAEPGRDSAEPGSAGPGARGTAGAPAVFVLLEERRPGGPSGSGGGGGGNGGG
SSGSLLSLPSQAAPAASSQAPASSSLIMSSRILLRQQLMRAQAQEQEQRERRERAASGAF
SGGPAPPASPAISVVVGASPGGPSGGVGLTRPASAQVPVEVLKVQTHLENPTRYHLQQAR
RQQVKQYLSTTLGPKLASQALTPPPAEGTSAERSQPAAGSAPNSPMALLNIGSSSEKEVS
PQCDPGQSTKLKLNLLLPPGLFSGSQIDDVIDEIISLESSYNDEMLGYLPGGPGGLQLPS
TLPVSGNLLDVYSGPSAVTPAVPVSNSCPAELTSIKQEISENEAKALLKERQKKDNHNLI
ERRRRFNINDRIKELGTLIPKSSDPEIRLNKGTILKASVDYIRKLQKEQQRAKDLESRQR
VLEQANRSLQLRVQELELQAQIHGLPLSPASKGDPLECSAPQPLPPPPEALLDLHFPGDP
LGELGEDPFQLGLEDILMEEDEAATAAGLLGSGTGLSPLRAATDPLLSSVSPAQSKGSSS
RRSSFSMEEES
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgtccatgtcggtatctggggcggagccgggccgggactcagcggagcccggg
agcgccgggcctggagcgcgggggaccgccggcgcccccgccgtcttcgtgctgctggaa
gagcggcggcccggagggccctccggaagcggtggcggcggcggcggcaacggcggcggc
agctcgggttcgctgctcagcctcccttcccaggcagctccagcagcatcctcacaggct
ccagcttcgtcatctttaatcatgtcttcccggatcctccttcgccagcagctgatgaga
gcccaagcacaagagcaagagcagcgggagcgtcgggagcgggcggcttccggcgcgttc
tctggcggcccggcccctccggcgtccccggccatctcggtggtagttggggctagccct
ggtggcccttctggtggggtggggcttacccgacccgcctctgctcaggtgccggtggag
gtgctgaaggtccagacacacctagagaaccctacccgctaccacctgcagcaggcccgg
cgccagcaggtcaaacaatacctgtcaactacacttggccccaagcttgcttctcaggcc
ctgacaccaccacctgctgagggtacttcagctgagaggtcccagccagctgcaggaagc
gcccctaatagccccatggcccttctcaacattggctccagttcagagaaggaggtaagc
ccccagtgtgaccctgggcagagtaccaagctgaagttaaatcttctcctgccacctggt
ctcttctctggttctcagattgatgatgtgattgatgagatcatcagcttggagtccagt
tataatgatgagatgcttggctacctgcctggaggccctgggggactgcagctcccaagc
acactgcccgtttctgggaacctgctggatgtgtacagtggccccagtgccgtgacccca
gctgtccctgtcagcaactcctgtcctgctgagctgaccagtatcaagcaggagatctcc
gagaatgaggcaaaggcccttctgaaggagcgccagaagaaggacaatcataatcttatt
gaacggcggagacgctttaacatcaatgaccggatcaaggagctgggcaccctgatcccc
aagtccagtgacccggaaatccgattgaataagggaaccatactcaaggcctcagtggac
tatatccgaaaactccagaaggagcagcagagggccaaagatctggagagccgacaacgg
gtgctggaacaagccaaccgaagcctgcagctcagggtccaggagctggaactccaagca
cagatccatggcctgcccttgtcccccgcctccaagggagatccactggaatgcagtgcc
ccgcagcccctgccccctcctcctgaagctctcctggatctacactttcccggggatccc
ctgggggaactgggcgaagatcccttccagctcggcctagaggacattctgatggaggag
gacgaggcggccacggcggcgggactcctaggctcagggacagggctgtcccctctgcgg
gccgccactgaccccttgctttcctctgtctccccggcccagtccaaggggagcagcagc
cggcggagcagtttcagcatggaggaggagtcctga
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