Sarcophilus harrisii (Tasmanian devil): 100919949
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Entry
100919949 CDS
T02286
Symbol
HCN3
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100919949 (HCN3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shr04040
]
100919949 (HCN3)
Ion channels [BR:
shr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
100919949 (HCN3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
100919949
NCBI-ProteinID:
XP_012403612
Ensembl:
ENSSHAG00000008495
UniProt:
G3W309
LinkDB
All DBs
Position
4:357582731..357592407
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AA seq
788 aa
AA seq
DB search
MDAEQRPVAATAGGGDGGTPGLESAPSPVPGPAAAVPGPSPVPGPEAGPGPMRRQLGALL
QPAVNKFSLRVFGSHKAVEIEQERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPV
GITFFKEENSPPWIVFNVLSDTFFLLDLVLNFRTGIVVEEGAEILLAPHAIRTRYLRTWF
LVDLISSIPVDYIFLVVELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQ
WEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVSINHMVNHS
WGRQYSHALFKAMSHMLCIGYGQQAPQGMPDVWLTMLSMIVGATCYAMFIGHATALIQSL
DSSRRQYQEKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREE
IINFTCRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLL
SVLTRGARDTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMR
RAFETVAMDRLHRIGKKNSLLQRKRSEPSPGNGGGGVMEQHLVQHDRDMARGVRGLAPGT
GARLSGKPVLWEPLVHAPLQAAAVTSNVAIALTHHRAPLPLSPDSPAVLLARSARRSAGS
PASPLVPARGPPLLARGPWASTSRLPAPAARTLHASLSRAGRSQVSLLGPPPGGGGRRLG
PRGRPLSASQPSLPHRAAGDGSPGRKGSGGERLPPSGLSSRLPGTTQALRPPACDPGPAR
GPQLPANM
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggagcagcggcccgtggcagcaacagctggtgggggagacgggggcaccccg
gggctggagtcggccccctcgcctgtccccggtccggctgccgcggtcccagggccctcg
cccgtgccggggcctgaagcggggcccgggccgatgcggcggcagctcggggccctgctc
cagccagccgtcaacaagttctccctccgggtgttcggcagccacaaggcggtggagata
gagcaggagcgggtcaagtcagcgggagcctggatcatccatccctacagcgacttccga
ttttactgggacctgatcatgctactattaatggtggggaatcttattgtcctccctgtg
ggcatcacctttttcaaggaggaaaactccccaccctggattgtcttcaatgtcctctcc
gacacctttttcttgctggacctggtgctgaacttcagaacagggattgtggtggaggaa
ggagcagaaattcttctggctcctcatgccatccgcactcgctacctccgtacttggttt
ctggtggatctcatctcttccattccagtggactacatcttccttgtggtggagttggag
ccacgattggatgctgaggtttacaagacagctcgggcccttcgaattgtccgtttcacc
aagatcctcagccttcttcggctgctccgcctctcccgcctcatccgatacatccaccag
tgggaggagatctttcacatgacctatgacttggccagtgctgtggttcggatcttcaat
ctcattgggatgatgctactattgtgtcactgggatggctgcctacaattcctggtcccc
atgctccaggactttcctcctgattgctgggtttccatcaaccacatggtgaatcactcg
tggggtcgccaatattctcatgccctcttcaaagccatgagccacatgctatgcataggc
tatgggcaacaagcacctcagggcatgccagatgtctggcttaccatgcttagcatgatc
gtgggagccacatgctatgccatgttcattggtcacgccactgccctcatccagtctctt
gattcatcccgtcgccagtaccaagagaagtataagcaggtggagcagtacatgtccttc
cacaaactgccagctgatacccgtcagcgcatccatgagtactatgaacatcgctaccag
ggcaaaatgtttgatgaggagagcatcctgggagagctgagtgagccactgcgtgaggag
attattaatttcacctgtaggggcctggtggcccacatgcccctgtttgctcatgctgac
cccagctttgtcactgctgtgctcaccaaacttcgatttgaggtctttcaaccaggtgac
cttgtggttcgtgagggctcagtgggtagaaagatgtacttcatccagcatggacttctc
agtgttctgacccgcggtgctcgggacactcgactcactgatggctcttactttggggaa
atctgtctactgactaggggcaggcgcacagctagcgtgagggctgacacctattgtcgc
ctctactcactcagtgtggaccactttaatgccgtgctagaggaattccccatgatgcgg
agagcctttgagacagtggccatggacaggttgcaccgaattggaaagaaaaattccctt
cttcagcggaagcgttcagaacccagcccaggaaatggtggtggtggggtcatggaacag
cacttggtacagcatgaccgggacatggcccggggcgtgaggggtctggctccgggcacc
ggtgcccgcctgagtgggaagccggtgctatgggagcccctggtccacgccccattgcag
gcggccgcagtcacctccaacgtggccatcgctctgacccaccaccgagcacctctgccc
ctctccccagactctcctgcagttcttcttgctcgctctgctcgtcgctcagctggctcg
ccggcctccccactggtgcccgctcgggggccccctctgttagctcgagggccttgggca
tccacgtcccgccttcctgcaccagcagcccgaactcttcatgccagcctatctcgagca
ggccgttcacaggtttccctgttaggtccaccacccggtgggggtggacggcggctgggg
cccaggggacggccgctttcagcatcacaaccttcccttcctcaccgagcagctggggac
ggctcccctgggcgcaagggctcgggaggtgagcgcttgcccccctcgggactttcatcc
aggctcccagggaccacccaagccctcaggcctcctgcctgtgatccgggtcctgccagg
ggcccccagcttcctgctaacatgtaa
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