Sarcophilus harrisii (Tasmanian devil): 100920001
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Entry
100920001 CDS
T02286
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shr03009
]
100920001 (DCAF13)
04121 Ubiquitin system [BR:
shr04121
]
100920001 (DCAF13)
Ribosome biogenesis [BR:
shr03009
]
Eukaryotic type
90S particles
Other 90S particles
100920001 (DCAF13)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100920001 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
KNTC1_N
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
100920001
NCBI-ProteinID:
XP_003760361
Ensembl:
ENSSHAG00000006588
UniProt:
G3VWM4
LinkDB
All DBs
Position
1:585601429..585636969
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYTRALNAVKLERVFAKPFLA
SLDGHRDGVNCMAKHPKSLSTVLSGACDGEVRIWNLTKRECIRALQAHEGFVRGMCTHFS
GTSFFTIGDDKTVKQWKMDGPEYGEEEEPLHTILGKTVYTGIDHHWNKDIFATCGQQVDI
WDEQRTSPICSMTWGLDSISSVKFNPIEINILGSCASDRNIVLYDMRQATPLKKVILDMR
TNTICWNPMEAFVFTAANEDYNLYTFDMRSLDEPVKVHVNHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPVDKMHSREVYHTKRMQHVISVKWTSDNKYILCGSDEMNIRLWKANASEKL
GVLTSREKAALNYNQKLKEKFKYHPQISRIARHRHLPKTIYSQIKEQRIMKEARQRKQMN
RIKHSKPGSIPFVSEKKKHIVAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaaatgttgagccggaacccggacaactatgtccgagaaaccaagctggac
ctgcagagagttccaagaaactatgatcctgcattgcatccttttgaagttccacgagaa
tatacaagagctctaaatgctgtcaaattggaacgagtatttgcaaaaccattccttgct
tccctggatggccatcgagatggagtaaattgcatggcaaaacatccaaagagcttgtct
actgtgctttctggagcttgtgatggagaggttagaatttggaacttgactaaacgagaa
tgtatccgtgcattgcaagcacatgaaggttttgtacgaggaatgtgtacccacttctct
ggaacttctttctttacgattggtgatgataagactgtgaagcagtggaaaatggatgga
ccagaatatggagaagaagaggaacctttacatacaatactaggaaagacagtgtataca
ggaatcgatcatcattggaacaaagatatttttgctacatgtgggcaacaggtggatatc
tgggatgaacaaagaaccagtcctatttgttcaatgacttggggccttgacagtataagc
agtgttaaatttaaccccattgagatcaatatcttgggaagttgtgcttctgacagaaat
atagtgctatatgatatgagacaagcaactcctttgaaaaaggtcatcttggatatgagg
acaaatacaatttgttggaatccaatggaagcttttgttttcactgcagcaaatgaagat
tataatttatatacatttgatatgcgttcccttgatgaacctgtgaaggtacatgtgaat
catgtatctgcagtccttgatgtggattactcacctactgggaaagaatttgtgtccgct
agtttcgacaaatccattcgaatcttccctgtagacaaaatgcatagcagagaagtatat
cacacaaagagaatgcagcatgttatttctgtgaaatggacatctgacaacaaatatatt
ttatgtggatctgatgaaatgaacattcgactctggaaagccaatgcttctgaaaaattg
ggtgtgcttacatcacgagaaaaagcagccttaaattataaccagaagttgaaggagaag
tttaaataccatcctcagataagtcgcatagcaagacatcgtcatttacctaagaccatc
tatagccaaattaaggagcagcgcatcatgaaagaagctcgtcaaaggaagcaaatgaat
cgtatcaaacatagcaaacctggatctataccatttgtgtcagagaagaagaagcatata
gtggctgttgtgaaataa
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