Sarcophilus harrisii (Tasmanian devil): 100920003
Help
Entry
100920003 CDS
T02286
Symbol
HDGFL2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2 isoform X1
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shr03400
]
100920003 (HDGFL2)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100920003 (HDGFL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
100920003
NCBI-ProteinID:
XP_031803678
Ensembl:
ENSSHAG00000002056
UniProt:
G3VGL5
LinkDB
All DBs
Position
1:complement(654543430..654572076)
Genome browser
AA seq
657 aa
AA seq
DB search
MPHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
YEKYKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPPPVSSSDSEVLAGSDAEDDAGLMAV
ASVTAASASEKMESDEESDKGSEHSGIKRKAPPLKMPVSKRARKASSDLDLASASPSEDE
NSESSSESEKNSDQDFTPEKKTVSRAPRRGPVGGRKKKVKVDSASDSDSKADSEEAHNKP
MVVTKSDSDSDSDSDSDISVKKPPRGRKPAEKPPPKPRGRKPKVERVPSSSSSDSDSDSE
VDRISEWKRRDEERRRELEEKRKREQEEELRRLREQEKEEKERKKERSEREESHPHSDSS
ETELKDEEPIKKRGKKGRGRAPSSSESEPELEKEVKKPSKKPPPQSLEPSKKTNQKEKRS
RPEEKPRAKPVKVERARKKSEVLPERRVEKKKEPSVEERLQKLHSEIKFALKVDNPDVKR
CLNALEELGSLQVTSQILQKNTDVVATLKKIRRYKANQEVMEKAAEVYTRLKSRVLGPKV
EANQKTNKPSLEKVKAEVERSEDQLAGGEAPKEKTEEEPNADLSAPVNGESTAQKGESGE
DKEREEGQNMGDGQRCGSSEDLHNDNIQEDPELDRPGNDRQERERVRMDSESLDEES
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacgccttcaagcccggggacctggtgttcgccaagatgaagggctacccgcac
tggccggcccggattgatgacattgcagatggggcagtaaaaccaccccccaacaagtac
cccatcttcttctttggcactcatgaaacagccttcctgggacccaaggacttgttcccc
tatgaaaaatacaaggataagtatgggaaacccaacaagagaaaaggtttcaatgaaggc
ctgtgggaaatccagaataacccccatgccagttacagtgctccaccgcccgtgagttct
tctgacagtgaagttctggccggaagtgatgcagaagatgatgcggggctcatggctgtt
gcctcagtgacagcagccagcgccagtgagaagatggaaagtgatgaagagtctgacaag
ggcagtgaacacagtgggataaagcggaaagcgccaccattgaaaatgccagtgtctaaa
cgggcacgaaaagcctccagtgatctagacctggccagtgcatccccatctgaagatgaa
aactcagaaagctcatcggaatcagaaaaaaacagtgatcaggatttcactccagagaag
aaaactgtgtcccgggctcctaggaggggcccggttggaggaaggaagaagaaggtgaag
gtggattctgcttctgattcggactccaaggctgactcagaggaagctcataataaaccg
atggttgtgacaaagtctgactcggactcagactcggactcggactctgacatctctgtc
aagaagcctccccggggcagaaaaccagctgagaagcctccccccaaacctcggggaagg
aagcccaaggttgaacgtgttcccagcagctccagcagtgacagcgacagtgacagtgaa
gtggaccgcatcagcgagtggaagcggagggacgaggagcggcgtcgggagctggaggag
aagcggaagcgtgagcaggaggaggagctgcgtcgactgcgggaacaagagaaggaggag
aaggagcggaagaaagaaagatctgagagggaggagtcgcacccccacagcgacagcagt
gagaccgagctcaaggacgaggagcccatcaagaagaggggcaagaaagggcgtggccga
gccccctcatcctccgaatcggagccagagctggagaaggaggtgaagaagccatcaaag
aagcctccacctcagtccttggagccatcgaagaaaacgaaccagaaggagaaacggagt
cgcccagaggagaaaccccgagccaagcctgtgaaagtggagcgagccaggaagaaatca
gaggtgcttccagagaggagggttgaaaagaagaaagagccatctgtggaagagaggctg
cagaagttgcacagtgagatcaaatttgcgctgaaggttgacaatccggatgtaaaaaga
tgcctcaatgccctggaggagttggggagtctgcaggtgacctctcaaattctccagaag
aacactgatgtagtggccacattaaaaaagattcgtcgttacaaagccaaccaggaagtg
atggagaaagcagcagaagtctacactaggctcaaatcaagagtcctgggaccaaaggtt
gaagcaaaccagaaaactaacaaaccttccttggagaaggtcaaagcagaggtggagagg
agtgaagatcaattggcaggaggggaggcccccaaggagaagacagaggaagaacctaat
gctgatctctctgctccggtgaacggtgagtccacagcccagaagggggagagtggagag
gacaaagaacgagaggaaggacagaatatgggagatgggcagaggtgcggctcatctgag
gacctgcacaatgacaacattcaagaggatccagaactggacaggccagggaatgaccgg
caggaaagagagagggttcggatggactcggagtcccttgatgaggagagctga
DBGET
integrated database retrieval system
