Sarcophilus harrisii (Tasmanian devil): 100920015
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Entry
100920015 CDS
T02286
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03440
Homologous recombination
shr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100920015 (TOP3A)
03460 Fanconi anemia pathway
100920015 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shr03032
]
100920015 (TOP3A)
03400 DNA repair and recombination proteins [BR:
shr03400
]
100920015 (TOP3A)
Enzymes [BR:
shr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
100920015 (TOP3A)
DNA replication proteins [BR:
shr03032
]
Eukaryotic type
DNA Topoisomerases
100920015 (TOP3A)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
100920015 (TOP3A)
FA (Fanconi anemia) pathway
100920015 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
100920015
NCBI-ProteinID:
XP_031794481
Ensembl:
ENSSHAG00000002971
UniProt:
G3VJM6
LinkDB
All DBs
Position
1:complement(233842178..233882982)
Genome browser
AA seq
988 aa
AA seq
DB search
MTFLAIRVGLRAVRGLSRDAMEAAFRGCRRVLCVAEKNDAAKGIADLLSGSRMRRREGLS
KFNKIYEFDYQLHGQNVTMVMTSVSGHLLAHDFQMPFRKWQSCNPLVLFEAQIEKYCPEN
FVDIKKTLEKEVKQCQSLLIWTDCDREGENIGFEIIHVCKAVKPNLRVFRARFSEITANA
VKTACQHLTEPDQRVSDAVEVRQELDLRIGAAFTRFQTLRLQKIFPEVLAEQLISYGSCQ
FPTLGFVVERFKAIQAFVPETFHKIKVTHEHEDGVVDFSWKRHRLFNHTACLVLYQMCME
DPVATVVEVASKPKSKWRPQPLDTVELEKLASRKLKINAKETMKIAEKLYTQGYISYPRT
ETNIFPKDLNLTTLVQQQTHDQQWGAFAQRILDRGGPTPRNGKKSDQAHPPIHPTKYTCN
LQGNEKRLYEFIVRHFLACCSEDALGQETTVEIDIAQERFVAHGLMILARNYLDVYIYDK
WSDKVIPIYEKDSCFQPTTIEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAEHIETI
KSRMYVGLTSDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKKDKHVV
LRQQIQKYKQVFIEAVAHANKLDEALSQYFGEMATAVEQEELYPAMPETIRKCPQCNKDM
VLKRKKNGGFYISCMGYPDCRKAIWFPDSVLEVSKDESVCPVCKPHPVYRLKLKFKRGSV
PPTMPLEFVGCVGGCDETLSQILDLRSSSGPSRASQPSGQPTNYLQANQSLNRMSNSQGR
SSISPTEQQTRPLEPSARRPAATNENHNTVMCNCGQEALLLTVRKEGPNQGRLFYKCNTN
NCNFFLWADSHQGTEVASSSRIRTPSHFQGNSTNSGGRQDGFGNHGSAICMCNQPAITRT
VQKEGPNKGRQFHTCSKPREQQCGFFQWADENMVPVNSGPVWFRGRGSEAKSKRPRTNSN
TDPTTKKVRKCSVCHQPGHTRITCPQNR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgacttttctggctatccgcgtaggcctccgcgctgtccgcggcctgtcccgcgacgcc
atggaggcggctttccggggctgccgccgagtcctctgcgtggcggagaagaacgacgcg
gccaagggtatcgcggaccttctctccggcagccggatgcggaggagagaaggattgtcc
aaattcaataagatctatgagtttgactatcaactacatggccagaatgtcaccatggta
atgacttctgtttctggacatttgctcgctcatgatttccagatgccgtttagaaaatgg
cagagctgcaaccctcttgtactctttgaagctcaaattgaaaaatactgcccagagaac
tttgtagatatcaagaaaacattggagaaagaggtcaaacaatgccagtctttgttgatc
tggactgattgtgatcgagagggagagaacattgggtttgaaattatccatgtgtgcaaa
gctgtgaagccaaatctccgagtatttagagcccgcttctctgaaatcactgctaatgct
gtcaagacggcctgtcaacacctgactgagcctgatcagagagtgagtgatgctgtggaa
gtaagacaggaattagacctgaggataggagctgccttcacaaggttccagactttaaga
cttcagaaaatctttccagaggtattggcagagcagctgatcagttatgggagctgtcag
ttcccaacattgggatttgtggtagaaaggttcaaagcaatccaagcttttgtgcctgag
actttccacaaaattaaagtgactcatgagcatgaagatggagttgtggatttcagctgg
aaaagacatcgtctctttaatcatacagcatgtcttgtcctttatcaaatgtgcatggaa
gatccagtagccacagtagtagaagttgcatctaagcctaagagcaaatggagacctcag
cctttggatacagtggaactcgaaaaattggcctctcgaaaattgaagataaatgccaaa
gaaaccatgaaaattgctgagaagctctatactcaggggtatatcagctatccccgaact
gagacaaatatttttcccaaagacttaaacctgacaactttggtgcagcagcagacacat
gaccaacaatggggagcctttgcccagagaattctagatagaggtggtcctacccctcgt
aatgggaaaaaatctgatcaagctcatcctcccattcaccccaccaaatacacgtgtaac
ctgcaggggaatgaaaaacgactgtatgaatttattgttcgccattttctagcctgttgc
tctgaggatgctctgggacaggaaacaactgtagagattgatattgctcaagagcgcttc
gttgctcatggtctcatgattctggccagaaactatttggatgtttacatatatgataaa
tggagtgacaaggtcattcccatctatgagaaagactcctgcttccagccaaccacaata
gaaatggtggatggtgagaccagtccacctcaactcctcacagaagcagatcttattgcc
ctcatggagaaacatggcattgggacggatgcaactcatgcagagcatattgagaccatc
aaatcacggatgtatgtgggactcacctctgataaaagattcctcccaggacatttgggc
atggggctggtggaaggttatgattccatgggctatgagatgtctaaacctgatctccgg
gctgagctagaagctgacctaaaacttatttgtgagggaaaaaaggataagcatgtggtt
ctaagacagcaaatccagaaatataagcaagttttcatcgaagctgtggcccatgccaac
aagctggatgaagcgttgtctcagtattttggagaaatggccacagcagttgagcaagag
gaactgtatcccgcaatgccagaaactatcaggaagtgtccacagtgtaacaaagacatg
gtgctcaagagaaagaaaaatggcggattctacatcagctgcatgggctatccagactgc
cgaaaagctatatggtttccagattccgttctagaagtcagtaaggatgagagtgtgtgt
ccagtctgtaaaccacatcctgtttacaggttgaaattaaagttcaaacgaggaagtgtc
cctcccaccatgcctctggaatttgttggctgcgttggaggttgtgatgagaccctgtcg
cagatcctggatctaagatcttccagtggtccttccagagcttcacagccatcaggccag
cctaccaactatttacaggccaaccaatccttgaacagaatgagcaacagtcagggcaga
tcttccatttctcctacagaacaacaaactagaccccttgagccctcagctagaagacct
gcagccactaatgagaatcacaacactgtgatgtgtaactgtggccaagaggccctcttg
ctcactgttcgtaaagaagggcccaatcagggcaggctcttctacaagtgcaacacaaac
aattgcaatttcttcctgtgggctgatagtcaccagggaacagaagtggcctcttcctca
agaataaggactccaagtcatttccaagggaactccacaaattctggaggaaggcaagat
gggtttggaaaccatggcagtgccatatgcatgtgcaaccaacctgccatcacacggaca
gtgcaaaaggaggggccaaataagggacgacagttccatacatgctcaaagccgagggag
caacagtgtggtttctttcagtgggctgatgaaaacatggtaccagtaaattctggacca
gtttggtttcgggggagagggtcagaagccaaaagcaaaagacctaggactaactcaaac
actgaccccacaacgaagaaagtacggaaatgtagtgtctgtcaccaacctggacatacc
cggatcacctgccctcagaacaggtga
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