Sarcophilus harrisii (Tasmanian devil): 100920023
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Entry
100920023 CDS
T02286
Symbol
HMGCL
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr00280
Valine, leucine and isoleucine degradation
shr00650
Butanoate metabolism
shr01100
Metabolic pathways
shr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
100920023 (HMGCL)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
100920023 (HMGCL)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100920023 (HMGCL)
Enzymes [BR:
shr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
100920023 (HMGCL)
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
100920023
NCBI-ProteinID:
XP_031818469
Ensembl:
ENSSHAG00000005255
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Position
3:559248617..559263841
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AA seq
327 aa
AA seq
DB search
MGTVWRSLSPLRMVGVSSLRAISSSLPVFPKQVKIVEVGPRDGLQNEKNILPAHLKIRLI
DMLSEAGLPVIEATSFVSPKWVPQMADHTEVLMGIKKFPGIHYPVLTPNLQGFQAAVAAG
AKEVAIFGAASELFTKKNINCSIDESLEKFEKVLSAAKGSGIRVRGYVSCVLGCPYEGKI
SPAKVAEVAKKLYSMGCFEISLGDTIGVGTVVGMKDMLSAVMKEVPVSALAVHCHDTYGQ
ALSNILMALQMGVTVVDSSVAGLGGCPYAKGASGNVATEDLLYMLNGLGIETGVSLPKLL
EAGSFICKALNRKSNSKVAQATSCSKL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgtctggagatcgttatcgccccttaggatggtcggggtgtcttctctgcgg
gctattagctccagcctacctgtgttcccaaagcaagttaaaattgtggaggttggcccc
cgagatggtctgcaaaatgaaaagaatattctacctgctcatttgaaaatcaggctgatc
gacatgctgtctgaggcgggactccctgtcatcgaggccaccagcttcgtgtcccccaag
tgggtgccccagatggcagatcatacggaagtcctgatgggcattaagaagtttcctggc
atccactacccagtcctgacccccaatctccaaggcttccaggcagcggtcgctgcaggg
gccaaagaagtggccatctttggggctgcctcagagctcttcaccaagaagaacatcaac
tgctccatcgacgagagcttggagaagtttgagaaagtcctgagtgcggccaaaggctcc
ggcatccgggtgcgagggtacgtgtcctgcgtgcttggatgcccgtatgaagggaaaatc
tccccagccaaagtagctgaggtggctaagaagctgtactcaatgggctgctttgagatc
tccctgggtgacaccattggtgtaggcacagtggttggcatgaaggacatgctgtctgct
gtcatgaaggaggtgccggtgagtgccctggccgtccattgccacgatacctatggacaa
gccctcagcaacatcctgatggctcttcagatgggagtgactgtggtggattcgtcagtg
gctgggcttgggggttgtccatatgccaaaggtgcatccggaaatgtggcaacagaagac
cttctgtatatgctgaatggactggggattgagacaggggtgagccttccgaaattgttg
gaagctggaagttttatctgcaaagccttgaatagaaaaagcaattccaaagtggcccag
gccacttcctgctctaagctgtga
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