Sarcophilus harrisii (Tasmanian devil): 100920103
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Entry
100920103 CDS
T02286
Symbol
SNCAIP
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr05012
Parkinson disease
shr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
100920103 (SNCAIP)
05022 Pathways of neurodegeneration - multiple diseases
100920103 (SNCAIP)
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Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
100920103
NCBI-ProteinID:
XP_031794871
UniProt:
G3WNQ8
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Position
1:242536413..242727052
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AA seq
965 aa
AA seq
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MEAPEYLDLDEIDFSDEISYSVTSLKTIPELCRRCDSQNEDRSVSSSNWNCGVSTLIANA
QKPTGIADVYSKFRPVKRVSPLKHHPETLENNESDDQKNEKVEYQKGGAFDQPPPTEELC
PGEGEALKSKNLEPSVLLGELEHYDLDMDEILDVPYIKSSQQLASFTKAATEKRILGICS
TVNGLSGKNSSTGNSESLTASMTPFCVLSPVKSSHLKKAQSLILDQHKLSTEDSELSPSL
VTCNSVHEPEAQSKGFLNKAFADPNILKVENIVPGGSQLRTLHLQSSVTEPKLDEQSSHG
NWNSGNPEERSEDMKKIKSILNIVKEGQISLLPHLAADNLDKIHDENGNNLLHIAASQGH
AECLQHLTSLMGEDCLNERNNDKLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDFPS
LIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQDGNSAVHVTSQHGYLGCIQTLVEYGAN
VTMQNHAGEKPSQSAERHGHTMCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQNQ
LQQLLEAQRSEGKALLSSPSSPSSPASGKSHWKSTDADELCVTKNKPNIQDGIQVLGSLS
ASNRTKFRAKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQTSSRNMKKIPPEKREL
KLARLRQLMQRSLSESDTDSNSEDLKNTPVRRTDKPRPQPIVESVESAENLQLMIKKHTL
ATGRRFPFSIRASKSVDGHSPSPTSESSDLDLETQYATSGSTSQGQSPGDITQSTPDSTT
AQKVATSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQVEQTELEPNGEKDKERAKVLQRL
PPNNETGDQLKRPFGTFRSIMETLSGNQNNNNNYQTVNQTKTSSTLPFTSLGRKAADTKG
NSVSSASKGKNKAGTHSSSCTNLSSNLLLEEHLRNYAWHTDINQKIEKSQSKESVDEPEL
QELFL
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggaagctcctgaataccttgatttggatgaaattgattttagtgatgagatatcttac
tcagtaacatcactcaagaccatcccagaactgtgtcggagatgtgattcacagaatgaa
gatagatcagtttctagttctaattggaactgtggagtctcaactcttattgcaaatgca
caaaagccaacaggaatcgcagatgtatacagtaagtttcgtcctgtgaagagagtttcc
cctttgaaacaccatccagaaacccttgagaacaatgaaagtgatgatcaaaagaatgag
aaggtggagtaccagaaaggaggagcttttgatcaaccacctccaactgaagaactgtgc
cctggagagggagaagcccttaaaagtaaaaaccttgagcccagtgttttattgggagag
ctggagcattatgacctcgatatggatgagattctggatgtgccctacattaagtcaagc
caacagcttgcatcttttaccaaggcagctacagaaaagagaattttgggtatatgttca
actgtcaatggcctctctggcaagaacagctccacaggaaattctgagagcttaacagct
agcatgacacccttttgtgtcttgtccccagtaaaaagctctcacttgaaaaaagctcaa
tctcttattcttgatcagcacaagctttctactgaagattcagagttgtccccatctctg
gttacatgcaactcagtccatgaacctgaagcccagagcaagggcttccttaacaaggca
tttgctgatcccaacatactaaaagttgagaacattgtaccaggcggcagccagctcagg
actttacacctgcaatcctcagtcacagagcccaaactggatgaacagagtagccatggg
aactggaattcaggaaacccagaagaaaggagcgaggacatgaaaaaaattaagagcatc
ttgaacattgttaaagaaggacagatatctctcttgccacacctagctgcagacaacctg
gataaaattcatgatgaaaacgggaacaatctgttgcatattgcagcctcccaaggacat
gcagaatgtttgcaacaccttacttctttgatgggagaagactgcttaaatgagagaaac
aatgacaagctaacacctgctggactagcaataaagaatggccagcttgagtgtgtacga
tggatggtgagtgaaactgaagctattgcagaattaagttgttcaaaggatttcccaagt
ctcattcactatgcaggctgctatggccaggaaaaaatccttctctggcttcttcagttt
atgcaagaacaagggatctctttggatgaagttgaccaagatggtaacagtgcagttcat
gtaacatcacagcatgggtacctaggatgcatacagactctggttgaatatggagcaaat
gttaccatgcagaatcatgcaggagagaaaccctcccagagtgctgagcgacatgggcat
accatgtgttcccgttacctagtggtggtggagacgtgtatgtctctagcatctcaggtt
gtgaagctaaccaagcaactgaaggaacagacagtggaacgtgtcacattacagaatcag
ctccagcagcttttagaagcacagagatctgagggcaaggccctcctttcttcccccagt
tcaccatcttcaccagcttctggaaaatcccattggaagtcaactgatgcagatgaattg
tgtgtaacaaaaaataaaccaaacatccaagatgggattcaagttcttggaagtctatca
gcctccaaccgtaccaaattcagggcaaaagatgaagattcagataaaatccttcgtcag
ttattggggaaagaaatttcagagaatgtctgtacccaggaaaagctatccttggaattc
caggatgctcagacttcctcaaggaatatgaaaaagattccaccagagaagagagagctg
aaacttgcccgactgagacaactgatgcagagatcactgagcgagtctgatacagattca
aattcagaggacctcaagaatactcctgtgcgaaggactgataagccaaggccccagccc
attgtagaaagtgtggaaagtgctgaaaatctacaactgatgattaaaaaacataccttg
gccacaggacgcaggtttccttttagcatcagggcctctaagtctgtggatggccatagc
ccatcccctacttcagaaagtagtgatctggacttagaaacgcaatatgcaacatctggg
agtacatctcagggccagtcacctggggacatcacacagtctactcctgatagtactact
gctcaaaaggttgctactagccccaaaagtgccctcaagtctccatcttccaagcgccga
acttcccaaaacttgaaacttcgagtaacctttgaggagccagtggtacaggtggagcaa
actgagcttgaacctaatggggaaaaggacaaagagcgggctaaggtccttcaacgactt
cccccaaataacgagacaggtgatcaactgaaaagaccatttggaacattcaggtccata
atggagacactaagtggcaaccagaacaataacaataactatcagacagtaaaccagacc
aagacctcatcaacactaccctttacctcactaggaaggaaagctgcagacaccaaggga
aattcagtgagctctgctagcaaaggaaagaataaggcagggactcacagcagcagctgt
accaatctttcctctaacttgctgcttgaagaacacctgcgtaactatgcatggcatact
gacataaatcagaaaattgagaaatctcaaagcaaagagagtgttgatgagccagagcta
caggaactcttcttgtaa
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