Sarcophilus harrisii (Tasmanian devil): 100920115
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Entry
100920115 CDS
T02286
Symbol
PAF1
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100920115 (PAF1)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
100920115 (PAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
100920115
NCBI-ProteinID:
XP_031818980
UniProt:
A0A7N4P643
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Position
3:589319557..589323330
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AA seq
541 aa
AA seq
DB search
MAPTIQTQAQREDGHRPNSHRTLPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQNRFVQ
YKATSLEKQHKHDLLTEPDLGVTIDLINPDTYRIDPNVLLDPADEKLLEEEIQAPTSSKR
SQQHAKVVPWMRKTEYISTEFNRYGVSNEKPEVKIGVSVKQQFTEEEIYKDRDSQITAIE
KTFEDAQKSISQHYSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDTSGSAALEM
MSQAMIRGMMDEEGNQFVAYFLPVEETMRKRKRDQEEEMDYAPDDVYDYKIAREYNWNVK
NKASKGYEENYFFIFREGDGVYYNELETRVRLSKRRAKAGVQSGTNALLVVKHRDMNEKE
LEAQEARKAQLENHEPEEEEEEELELDKEAPGSDEEREKGSGSEKEASEEEEEEERSGSE
SDRGEEEEKEESDKSGSGEDEAEEESSEDEARAARDKEEIFGSDADSEDEEEEEEEEEED
DDRGGRARGSGEEEEEEDSGSETGPGRRSPSPSFLSASDHSAQEDGSEGGASDSSEASDS
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaccatccagacccaggcccagcgggaggacggccacagacccaactctcat
aggactctgccggagaggtctggcgtggtctgtcgagttaaatactgcaacagtcttcca
gacatcccttttgatcccaagttcatcacctacccctttgaccagaacaggtttgtccag
tacaaggcgacctctctagaaaagcagcacaaacatgatctgctcacggagccagacctg
ggcgtcaccattgatctcattaaccccgatacctaccggatcgaccctaatgttcttcta
gatccagcagatgagaagttactggaagaggagatccaggccccgaccagttctaaaagg
tcccagcagcatgccaaagtggtgccctggatgagaaagacagaatatatctccacggag
ttcaaccgttatggcgtctctaatgagaagcccgaagtcaagattggggtgtctgtgaag
cagcagttcaccgaggaggagatctacaaagatcgagacagccagatcacagccatcgaa
aagacttttgaggatgctcagaagtcgatttctcagcactacagcaagccaagagttact
ccggtggaggtgatgcccgttttcccagacttcaagatgtggatcaatccgtgtgcccaa
gtgatctttgactcagacccagcccccaaggataccagtggttctgcagccctggagatg
atgtctcaagccatgatcaggggaatgatggacgaggagggtaaccagtttgtggcctac
tttctgccggtggaagagaccatgaggaagcgcaagcgggatcaggaagaggagatggac
tacgcaccagatgatgtctacgattacaagattgccagggagtacaactggaacgtcaag
aacaaggctagcaagggctatgaagaaaactacttcttcatcttccgagaaggtgacggg
gtctactacaacgaactggaaaccagggtccgtctcagtaaacgtcgggccaaggccgga
gtacagtccggcaccaatgctttgctggtggtcaaacaccgggacatgaatgagaaggag
ctggaagcgcaggaagcccgaaaggcccagcttgagaaccatgagccagaagaggaggag
gaagaagagctggagctggacaaggaagccccaggctctgatgaagaacgggaaaagggg
agcggcagtgaaaaggaagccagtgaggaggaagaggaggaggagcgctcaggaagtgag
agtgaccgtggagaggaggaggagaaggaggagagtgacaagagcggcagcggggaggac
gaggccgaggaggagagcagcgaggacgaggcccgcgccgcgcgagacaaggaggagatc
ttcggcagcgatgcagactcagaagacgaggaggaagaggaggaagaggaagaagaggat
gatgacaggggaggccgggccaggggcagtggggaggaggaggaggaagaagacagcggc
agtgagaccgggcctgggcggcgcagccccagcccctccttcctcagtgccagtgaccac
tcggcccaggaggacggcagcgaagggggcgcctcggactccagcgaggccagtgacagt
gactga
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