Sarcophilus harrisii (Tasmanian devil): 100920201
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Entry
100920201 CDS
T02286
Symbol
LAMP1
Name
(RefSeq) lysosome-associated membrane glycoprotein 1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03272
Virion - Hepatitis viruses
shr03273
Virion - Lassa virus and SFTS virus
shr04140
Autophagy - animal
shr04142
Lysosome
shr04145
Phagosome
shr05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100920201 (LAMP1)
03272 Virion - Hepatitis viruses
100920201 (LAMP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100920201 (LAMP1)
04142 Lysosome
100920201 (LAMP1)
04140 Autophagy - animal
100920201 (LAMP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
100920201 (LAMP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100920201 (LAMP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shr04147
]
100920201 (LAMP1)
04090 CD molecules [BR:
shr04090
]
100920201 (LAMP1)
Membrane trafficking [BR:
shr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
100920201 (LAMP1)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
100920201 (LAMP1)
Other autophagy associated proteins
RNautophagy/DNautophagy
100920201 (LAMP1)
Exosome [BR:
shr04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
100920201 (LAMP1)
CD molecules [BR:
shr04090
]
Proteins
100920201 (LAMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
100920201
NCBI-ProteinID:
XP_031814610
Ensembl:
ENSSHAG00000016646
UniProt:
G3WW03
LinkDB
All DBs
Position
3:166258826..166284499
Genome browser
AA seq
420 aa
AA seq
DB search
MAGPGGARTPQRLLLLLLGLIHVASSIFVVENGTKTACIMANFSAAFIMNYTTKGGFLNT
SFDLPQNAAVLNSSSCGQENASNPVLVIGFGAGHTLTMNFTRTSKSYQVQLLSFAFNLSD
KDLFPNASATSKEMSVESQTDIRADIDKKYRCISDNQIRMNNVTVTLRDVTIQAYLSNNS
FSKEETRCSQDAPSPAPVPTTHPTTTAPIPTPTRPPTPETPSVSKYNVSGINGTCLLASM
GLQLNFTYEKKDNTSVRRIININPNKTAVNGSCSPQVAVLELNTENSTLTFRFGMNATTS
KFFLQGILLNMTLSDAKKPSFEAFNYSLKELQASVGNSYKCNAEENVQVTESFSVNIFKV
RVQAFKVEGDKFGSVEECLLDENNMLIPIAVGGALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggctggccccggcggcgcccggacgcctcagcggctgctcctgctccttctcggactc
atacatgttgcatcttcaatatttgtggtggaaaatggcactaaaactgcatgcataatg
gctaacttctcagctgcctttattatgaactacaccactaagggtggttttttgaataca
agttttgatcttccacaaaatgcagcggtattgaatagcagcagttgtggtcaagagaat
gcatctaatcccgtcctagtgattggttttggagcaggacatactttgactatgaatttc
acaaggacttcaaagagttaccaagttcaactattaagttttgcttttaacttgtcagat
aaagatttattccctaatgcaagtgcaacttccaaagaaatgagtgtggaatcccaaact
gatattcgggcagatatagataaaaaatacagatgtatcagtgacaatcaaataaggatg
aataatgtaacagtaaccctgagggatgtcactattcaggcatacctttcaaataacagc
ttcagtaaggaagaaactcgttgcagtcaagatgcaccttccccagcaccagtgcctact
acacatccaacaacaactgcacctataccaacacctactaggcctcctacaccagaaact
ccatcggtttctaagtataatgtgagtggcataaatggaacttgtctgcttgccagcatg
ggtttacaactgaacttcacctatgagaaaaaagacaatacgagtgttagaagaataatt
aatatcaacccaaataagactgctgtaaatgggagctgtagtcctcaagtagctgtcttg
gagctgaacactgagaattctactctcactttccgttttggaatgaatgcaactactagc
aagtttttcctgcaagggatcctcttaaacatgactttgtctgatgctaaaaaacccagt
tttgaagctttcaattattcactgaaagagctacaagccagtgtaggaaattcttacaag
tgtaatgcagaagaaaatgttcaagtcacagagtcattttcagtcaacatattcaaagtt
cgggtccaggctttcaaggttgaaggtgacaaatttggatcagtggaggaatgtcttctg
gatgaaaacaacatgctgatccccatagctgttggtggagcccttgctggattagtcctc
attgttttgattgcttatcttattggaagaaagagaagtcatgctggatatcaaacaatt
taa
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