KEGG   Sarcophilus harrisii (Tasmanian devil): 100920316
Entry
100920316         CDS       T02286                                 
Symbol
LTBR
Name
(RefSeq) tumor necrosis factor receptor superfamily member 3
  KO
K03159  lymphotoxin beta receptor TNFR superfamily member 3
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04060  Cytokine-cytokine receptor interaction
shr04061  Viral protein interaction with cytokine and cytokine receptor
shr04064  NF-kappa B signaling pathway
shr04066  HIF-1 signaling pathway
shr04672  Intestinal immune network for IgA production
shr05166  Human T-cell leukemia virus 1 infection
shr05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:shr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    100920316 (LTBR)
   04066 HIF-1 signaling pathway
    100920316 (LTBR)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100920316 (LTBR)
   04061 Viral protein interaction with cytokine and cytokine receptor
    100920316 (LTBR)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    100920316 (LTBR)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100920316 (LTBR)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100920316 (LTBR)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04050 Cytokine receptors [BR:shr04050]
    100920316 (LTBR)
Cytokine receptors [BR:shr04050]
 Tumor necrosis factor receptors
  TNF receptor superfamily
   100920316 (LTBR)
SSDB
Motif
Pfam: TNFR_c6
Other DBs
NCBI-GeneID: 100920316
NCBI-ProteinID: XP_003771291
Ensembl: ENSSHAG00000014491
LinkDB
Position
5:complement(107276036..107283097)
AA seq 415 aa
MDAMRLSPACFLQGLVWGPLILGLLGFVAGNHLRQGPPDTKCGDKEYYEPKHQICCSRCP
PGMFVRSFCDKTRNTTCDVCPPGSFNEFWNHIEKCQLCRQCDEVLGFEEITPCNASKKTQ
CRCRQGMYCPNQGAECEHCEPLSPCPPGTEPELTGKPGEADNNCVPCKNGYFQNISSPDI
RCQPHTNCEAQGLVTTVSGTAESDARCQISPWKMPGTILLLYILIPLASILLLIIVFSYA
WKRHPSLCQKLGALLKRRPEREDLNPAPNQDVPGANQKFPDLVEPFLKAAGAAPPAPNGL
PLPAVETEILHQHCSLGQGREQGAEPEEQSQELPHGTNGIHVTGGSVTVTGNIYIYNGPI
LGGTRGPGEPPHLPEPPYPIPEEGTPNSLGFTGPHQEDGKAWHLAESETLGYYDQ
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacgccatgcgcctgtcccctgcctgtttccttcagggcctggtctggggccctctc
atcctaggcctccttgggtttgtggctggtaatcatctcagacaggggcctccggacaca
aagtgtggagataaggaatattatgagcccaaacaccagatctgctgttcccgctgccct
ccaggtatgtttgtcagaagcttctgtgataaaacacgaaacaccacctgcgatgtgtgc
cccccaggctcctttaatgaattctggaaccacattgaaaaatgccagttatgtcgccag
tgtgatgaagtgctaggctttgaggagataactccctgcaatgccagcaagaaaacccag
tgtcggtgtcgccagggcatgtactgccccaaccagggtgccgaatgcgagcactgcgag
ccgctcagcccctgcccgccgggcacagaacctgaactcacaggtaagcctggagaggct
gacaacaactgtgttccctgtaaaaacggctacttccagaacatttcttctcctgacatt
cggtgccaacctcataccaactgtgaggcccagggcttggtgactactgtttctgggact
gccgagtcggatgccagatgccagatctcaccatggaagatgccagggacaattttgctg
ctatatatcctgatccccctggcttccattctactccttatcatcgtcttctcctatgcc
tggaagaggcacccctctctctgccagaagctgggagcactactcaagagaagacctgag
agagaagatctgaatcctgccccaaaccaggatgtccctggagcaaatcagaagttccct
gacttggtagaaccattcctaaaagctgcaggagctgcccctccggcccccaatggactt
cccctaccagcagtggaaacagaaatcctgcatcaacactgctccctgggccagggccga
gagcagggcgcagagcccgaagagcagagccaggagctgccccatggtaccaatggtatc
catgtgacaggtggctcagtcactgtcacaggaaacatctatatctataatggaccaatc
ttgggaggaacacgggggcctggagagcctccgcatctccctgaacccccttaccctatc
ccagaggagggtaccccaaattccttgggcttcactggaccacaccaagaggatgggaaa
gcttggcatctagctgagtcagagaccttgggatactatgatcaatag

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