Sarcophilus harrisii (Tasmanian devil): 100920316
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Entry
100920316 CDS
T02286
Symbol
LTBR
Name
(RefSeq) tumor necrosis factor receptor superfamily member 3
KO
K03159
lymphotoxin beta receptor TNFR superfamily member 3
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04060
Cytokine-cytokine receptor interaction
shr04061
Viral protein interaction with cytokine and cytokine receptor
shr04064
NF-kappa B signaling pathway
shr04066
HIF-1 signaling pathway
shr04672
Intestinal immune network for IgA production
shr05166
Human T-cell leukemia virus 1 infection
shr05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100920316 (LTBR)
04066 HIF-1 signaling pathway
100920316 (LTBR)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100920316 (LTBR)
04061 Viral protein interaction with cytokine and cytokine receptor
100920316 (LTBR)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
100920316 (LTBR)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100920316 (LTBR)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100920316 (LTBR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
shr04050
]
100920316 (LTBR)
Cytokine receptors [BR:
shr04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
100920316 (LTBR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
100920316
NCBI-ProteinID:
XP_003771291
Ensembl:
ENSSHAG00000014491
LinkDB
All DBs
Position
5:complement(107276036..107283097)
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AA seq
415 aa
AA seq
DB search
MDAMRLSPACFLQGLVWGPLILGLLGFVAGNHLRQGPPDTKCGDKEYYEPKHQICCSRCP
PGMFVRSFCDKTRNTTCDVCPPGSFNEFWNHIEKCQLCRQCDEVLGFEEITPCNASKKTQ
CRCRQGMYCPNQGAECEHCEPLSPCPPGTEPELTGKPGEADNNCVPCKNGYFQNISSPDI
RCQPHTNCEAQGLVTTVSGTAESDARCQISPWKMPGTILLLYILIPLASILLLIIVFSYA
WKRHPSLCQKLGALLKRRPEREDLNPAPNQDVPGANQKFPDLVEPFLKAAGAAPPAPNGL
PLPAVETEILHQHCSLGQGREQGAEPEEQSQELPHGTNGIHVTGGSVTVTGNIYIYNGPI
LGGTRGPGEPPHLPEPPYPIPEEGTPNSLGFTGPHQEDGKAWHLAESETLGYYDQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatgcgcctgtcccctgcctgtttccttcagggcctggtctggggccctctc
atcctaggcctccttgggtttgtggctggtaatcatctcagacaggggcctccggacaca
aagtgtggagataaggaatattatgagcccaaacaccagatctgctgttcccgctgccct
ccaggtatgtttgtcagaagcttctgtgataaaacacgaaacaccacctgcgatgtgtgc
cccccaggctcctttaatgaattctggaaccacattgaaaaatgccagttatgtcgccag
tgtgatgaagtgctaggctttgaggagataactccctgcaatgccagcaagaaaacccag
tgtcggtgtcgccagggcatgtactgccccaaccagggtgccgaatgcgagcactgcgag
ccgctcagcccctgcccgccgggcacagaacctgaactcacaggtaagcctggagaggct
gacaacaactgtgttccctgtaaaaacggctacttccagaacatttcttctcctgacatt
cggtgccaacctcataccaactgtgaggcccagggcttggtgactactgtttctgggact
gccgagtcggatgccagatgccagatctcaccatggaagatgccagggacaattttgctg
ctatatatcctgatccccctggcttccattctactccttatcatcgtcttctcctatgcc
tggaagaggcacccctctctctgccagaagctgggagcactactcaagagaagacctgag
agagaagatctgaatcctgccccaaaccaggatgtccctggagcaaatcagaagttccct
gacttggtagaaccattcctaaaagctgcaggagctgcccctccggcccccaatggactt
cccctaccagcagtggaaacagaaatcctgcatcaacactgctccctgggccagggccga
gagcagggcgcagagcccgaagagcagagccaggagctgccccatggtaccaatggtatc
catgtgacaggtggctcagtcactgtcacaggaaacatctatatctataatggaccaatc
ttgggaggaacacgggggcctggagagcctccgcatctccctgaacccccttaccctatc
ccagaggagggtaccccaaattccttgggcttcactggaccacaccaagaggatgggaaa
gcttggcatctagctgagtcagagaccttgggatactatgatcaatag
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