Sarcophilus harrisii (Tasmanian devil): 100920538
Help
Entry
100920538 CDS
T02286
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04142
Lysosome
shr04144
Endocytosis
shr04721
Synaptic vesicle cycle
shr04961
Endocrine and other factor-regulated calcium reabsorption
shr05016
Huntington disease
shr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100920538 (CLTCL1)
04142 Lysosome
100920538 (CLTCL1)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
100920538 (CLTCL1)
09156 Nervous system
04721 Synaptic vesicle cycle
100920538 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100920538 (CLTCL1)
09164 Neurodegenerative disease
05016 Huntington disease
100920538 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100920538 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shr04147
]
100920538 (CLTCL1)
Membrane trafficking [BR:
shr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
100920538 (CLTCL1)
Exosome [BR:
shr04147
]
Exosomal proteins
Proteins found in most exosomes
100920538 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
Gp18_dom_I
capSnatchArena
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
100920538
NCBI-ProteinID:
XP_031804828
Ensembl:
ENSSHAG00000008777
LinkDB
All DBs
Position
1:complement(709524537..709588578)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSEPST
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKVKAHTMAEEVTFWKWISVNTVA
LVTDAAVYHWSMEGDSQPLKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKVEGNSKSSTLFCFAVRNPTGGKLHIIEVGQPAAGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKHGYIHMYDLESGVCIYMNRISA
DTIFVTTPHEPTSGIIGVNKKGQVLSICVEEDNIVNYATSVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGSYAEAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKATDPTLALSVYL
RASVPTKVIQCFAETGQFQKIVLYAKKVAYTPDWIFLLRSVMRVSPEQGLQFAQMLVQDE
EPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLAANIRQNLQLGVQVASKYHEQLGTQTLVELFESFKSYEGLFYFLGAIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STEDLVAEVEKRNRLKLLLPWLESRTHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIQVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPSELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVREAIDSYTKADDPSSYLEV
VEAASRNGNWEDLVKFLHMARKKGRESYVETELIFALAKTNRLSELEEFINGPNNAHIQQ
VGDRCYEEAMYEAAKLLYSNVSNFARLASTLVHLGEYQAAVDSSRKANSTRTWKEVCFAC
VDGQEFRLAQLCGLHIVIHADELEELISYYQDRGYFEEVIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLDLFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAITTMMA
HPTEAWKEGQFKDIITKVANVELYYKALRFYLDYKPLLINDLLLVLSPRLDHTRTVRFFS
KVNQLPLVKPYLRSVQNHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDNISLAQRLE
KHQLMEFRRIAAYLYKGNNRWRQSVELCKKDRLYKDAMQYAAESRDAELAEGLLQWFLEE
GKRECFAASLFTCYDLLHPDVVLELSWRHSIMDFAMPYFIQVMREYLTKVDGLFNKVDKL
DASESLRKDEEQGAEPTPIVFGQQLMLTAGPTSGPSQTNFSYGYTAPGFTQAPVYSFNM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagatccttcccatccgcttccaggagcacttccagcttcagaacctgggcatc
aatccggccaacattggcttcagcacgctgacgatggagtccgacaagttcatctgcatc
cgagagaaagtgggggagcaagcccaggtggtcatcatcgacatgagcgagccatccacg
ccgatccggcggcccatctccgcagaaagcgccatcatgaacccagcctccaaagtgatc
gccctgaaagcgggaaagaccctccagattttcaacattgagatgaagagcaaagtgaaa
gcgcacacgatggcagaggaggtgaccttctggaaatggatttccgtcaacaccgttgcc
ttggtgaccgacgcggccgtctaccattggagcatggagggagactcgcagcccctgaag
atgtttgaccgacacgcgagcctggctgggtgccagatcatcaactacaggaccgatgag
caccagaagtggcttctgctgatcggcatctctgcccagcaaaaccgtgtggttggcgcc
atgcagctttactcagtggacaggaaggtgtcacagcccatagaaggccatgccgcagct
ttcgccgagttcaaagtagaggggaactccaagtcttccactcttttctgtttcgctgta
cggaatcccaccggtggcaagctgcacatcatcgaggtgggccagcccgcggccgggaac
cagccctttgtgaagaaagccgtggatgtgttctttcctcccgaggcacagacggatttc
ccggtggccatgcagattggaatcaaacacggcgttatttacttgattacaaagcatggc
tatatccacatgtatgacttagagtccggagtgtgcatctacatgaaccgtatcagcgcc
gataccatcttcgtcacgactcctcacgagcccacctctgggatcattggggtgaacaag
aaagggcaggtcttgtccatctgtgtggaagaagataacattgtcaattatgctaccagt
gtgctccagaatcccgacctcggtctgcgcatggccattcgcagcaacctggcaggagcc
gaggagctctttgcccgaaagttcaataccctctttgcgcagggcagctacgccgaagcc
gccaaagtggctgcttccgcacccaaggggatcctgcgcaccagcgacaccatccggaag
ttccagagtgtcccggcccagcccgggcaggcctcccccttgctccagtatttcgggatc
ttgctggaccaggggcagctgaacaagttcgagtctctggagctctgccggcctgtcctt
cagcagggtcgcaagcagctcctggagaaatggcttaaggaggacaagttggagtgctcc
gaagagctgggggacctggtgaaggccacggacccgacgctggcgctcagtgtctacctg
cgggcgagtgtgcccaccaaggtgatccagtgcttcgccgagacgggccagttccagaag
atcgtgctctacgccaagaaggtcgcctacacgcccgactggatcttcctgctgaggagt
gtgatgagggtcagcccagagcagggcctgcagttcgcccagatgttggtgcaggatgag
gagccattggccaacatcaatcagatcgtggacgtcttcatggagaacagcctgattcag
cagtgcacgtccttcttgctggacgccttgaagaacaatcgcccggcagaaggccacctg
cagacccgcctcctggagatgaacctgatccacgccccccaggtcgcggacgccatcctt
ggcaatcagatgtttacccactatgaccgtgcccacatcgcccagctctgcgagaaggcg
gggctgctgcagcgggcgctggagcactacacggacctgtacgacatcaagcgggccgtg
gtgcacacccacctcctgaatcccgagtggctcgtgaacttcttcggctccctgtcggtg
gaggactccgtggagtgcctgcgggcgatgctggcggccaacatccggcagaacctgcag
ctgggcgtgcaggtggcctccaagtaccacgagcagctcggcacccagaccttggttgag
ctcttcgagtccttcaagagttacgaaggcctcttctacttcctgggcgcgatcgtcaac
ttcagccaggatccggacgtgcatttcaagtacattcaggccgcctgtaagaccgggcag
atcaaggaggtggaaagaatatgccgggagagcaactgctacaaccctgagcgggtgaag
aacttcctcaaggaggccaagctgaccgatcagctgcccttgatcattgtctgcgaccga
tttgactttgtccacgacctggtcctgtatctgtaccgcaacaacctgcagaagtacatc
gagatctacgttcagaaggtcaaccccagccggattcccgccgtggtcggagggctgctc
gatgtggattgctcggaagacgtcatcaaaaacttaatcatggtggtgaggggacagttc
tccaccgaggacttggtggctgaggtggagaaaagaaacaggctgaagctgctgcttcct
tggctggagtcccggacccacgagggctgcgaggagccggccacccataatgccctggcc
aagatctatatcgacagtaacaataaccccgagcgcttcctccgcgagaacccctactac
gacagccgggttgtaggtaaatactgtgaaaagagggacccgcatttggcctgtgttgcc
tatgagagggggcagtgtgacctcgaactcatccaggtttgtaacgagaattctctgttc
aaaagtgaagctcgttacctggtacgcagaaaagacccagagctctgggccaatgtcctg
gaggagaacaacccattcaggaggcagctcatcgatcaggtggtgcagacggccctgtct
gagacccaggaccccgaggaggtctcggtgactgtgaaagccttcatgacggccgacctg
cccagcgagctcatcgagctcctcgagaagatcgtcctagacaactctgtgtttagcgag
cacaggaatctgcagaacctcctgattttgaccgccatcaaggctgaccgcacacgcgtc
atggagtacatcaaccggctggataactacgacgcccccgacatcgccaacatcgccatc
agcaacgagctctacgaggaggccttcgccatcttcaggaagttcgatgtgaacacgtca
gccatccaggtgctgatagaacacatcggcaacttggaccgcgcctacgagtttgcggaa
agatgcaacgagcctgctgtatggagccagctggcccgagcccagctgcagaaggacctg
gtgagggaggccatcgactcgtacaccaaggcggacgatccctcctcctacctggaggtc
gtggaggctgccagcagaaacggcaactgggaagatctagtgaaatttctacacatggcc
aggaaaaagggccgagagtcatacgtggagaccgaacttattttcgctttggccaaaacc
aaccggctctcggagttggaggagtttatcaatggccccaacaacgcccacatccagcag
gttggtgaccgctgctacgaggaggccatgtacgaagccgccaagctgctctacagcaac
gtgtccaactttgcccgcttggcgtccaccctggtgcatctgggcgagtatcaggccgcc
gtggacagcagtcgcaaggccaacagcaccaggacctggaaggaggtgtgttttgcctgt
gtggacggccaggagttccgcctggcccagctgtgtggcctccatatcgtcatccacgca
gatgagctcgaggagctgatcagctactaccaggatcggggctatttcgaggaagtgatc
gccctgttggaggctgccctgggcctggagcgggcccacatgggcatgttcactgagctg
gccatcctgtactccaagttcaagccacagaagatgcgagagcacctggacctcttctgg
tcccgagtcaatattcccaaggtcctgagagcggctgagcaggcccatctctgggccgag
ctcgtgttcctctacgacaagtacgaggagtacgacaacgccatcaccaccatgatggcc
caccccaccgaggcctggaaagaagggcagttcaaggacatcatcaccaaggtggccaat
gtggaactgtactacaaagccctgcgcttttacctggattacaagcccctcctgatcaac
gacctcctgctggttctctcgccccggctggatcacactcgcaccgtcaggtttttctct
aaggtgaatcagctgcctctggtgaaaccttacctgcgttcggtccagaaccacaataat
aagggagtaaatgaggctcttaataacctgctgactgaggaagaggattaccagggcttg
agggcatctattgatgcttacgataactttgacaacatcagtctggctcagcgactggag
aagcaccaactgatggagttcaggcgcatcgcggcctatttgtacaaaggcaataaccgg
tggagacagagcgtggagctctgcaagaaagaccgtctctataaggacgccatgcagtac
gcggccgagtcccgggacgccgagctggccgagggcctgctgcagtggttcctggaggag
gggaagcgggaatgctttgctgcttctctcttcacctgctatgatctcctgcaccctgat
gttgtcctcgagctctcctggaggcacagcatcatggactttgccatgccctactttatc
caggtgatgagggaatatcttaccaaagtggatgggctgtttaataaggtagataaactg
gacgcttctgagagcctgaggaaagatgaggagcagggcgccgagcccacccctattgtt
ttcggccagcagctgatgctgacggcaggccccacttctggaccttcccaaaccaacttt
tcctacggatacacggctccaggattcacccaggcacccgtttacagcttcaacatgtaa
DBGET
integrated database retrieval system
