Sarcophilus harrisii (Tasmanian devil): 100920633
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Entry
100920633 CDS
T02286
Symbol
AGO1
Name
(RefSeq) protein argonaute-1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100920633 (AGO1)
03036 Chromosome and associated proteins [BR:
shr03036
]
100920633 (AGO1)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100920633 (AGO1)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100920633 (AGO1)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
100920633 (AGO1)
microRNA pathway
RISC loading complex
100920633 (AGO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
100920633
NCBI-ProteinID:
XP_003765388
Ensembl:
ENSSHAG00000017468
LinkDB
All DBs
Position
3:540291984..540327175
Genome browser
AA seq
857 aa
AA seq
DB search
MEAGPSGAAAGTYLPPLQQVFQAPRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIK
PDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGE
GKDRIFKVSIKWMAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFF
SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRN
IDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQ
TVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS
TMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVRDDMTEVTGRVLPAPILQYGG
RNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAG
MPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGM
ATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPP
AGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPT
RIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKNE
RIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQIL
TYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDPQAL
AKAVQVHQDTLRTMYFA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgggaccctcgggagcagctgcaggcacctacctgcctcccctgcagcaggtg
ttccaggccccgagacggcctgggataggcactgtaggcaagcccatcaagctcttggcc
aactatttcgaggtagatatccccaagatcgacgtctaccactatgaggtggacatcaaa
ccggacaagtgtccccgcagagtcaacagagaggtggtggaatatatggttcagcacttc
aagccacagatttttggtgacaggaaacctgtgtatgatgggaagaagaacatctacaca
gttactgccttgcctattggcaatgaaagggtggactttgaggtgacaatccctggtgaa
gggaaggatcggatcttcaaggtttccatcaaatggatggccattgtcagctggcgtatg
cttcacgaagccctggtcagtggacagattcctgtccctctggaatctgttcaggccctg
gatgtggccatgagacacctggcatctatgaggtacacccctgttggccgttccttcttc
tctccccctgagggatactaccaccctctggggggtgggcgtgaagtctggttcggcttt
caccagtctgttcggccagccatgtggaaaatgatgttgaatattgatgtttcggccacg
gctttctacaaagcacagccagtcattgagttcatgtgtgaggtgcttgacataaggaac
attgatgagcagcccaagccactaactgattcccagagagttcgattcaccaaggagatc
aaaggactgaaggtggaggtgacccattgtgggcagatgaagaggaaataccgagtgtgt
aacgtcacccgccggcctgccagccatcagacgtttcccttgcagttggagagtggacag
acagtagagtgcactgtggcccagtatttcaagcagaagtacaacctacaacttaagtat
ccccacctgccatgcctgcaggtcggccaggaacaaaaacatacctacctgcctctggag
gtctgtaacattgtggctggacagcgctgtatcaagaagctgacagacaatcagacttca
accatgatcaaagctactgcaaggtcagccccagacaggcaggaggagatcagccgcctg
atgaagaatgccagctacaatctagacccctacatacaggagtttgggatcaaagtcaga
gatgacatgacagaagtgactggccgagtactcccagctccaatcctgcagtatggtgga
cggaaccgagccatcgccacacccaaccaaggtgtatgggacatgcgaggaaagcagttc
tacaatggaattgagatcaaagtctgggccattgcctgctttgcaccccaaaagcagtgt
cgggaagaggtgctgaagaacttcacagaccagctccgtaagatttccaaggatgcaggg
atgcccatccagggccagccttgtttctgcaaatacgcgcagggtgcagacagcgtggag
cccatgttccggcatctcaagaacacctactcgggactgcaactcatcattgttatcctg
cccgggaagacgcctgtgtatgcggaggtaaagcgagtaggagacacgctgttaggcatg
gccacacagtgcgtgcaagtcaagaatgtggtgaagacatctccccagactctgtccaat
ctctgtctcaaaatcaacgtcaagcttgggggaatcaacaacatcctagtccctcatcag
cgatcagctgtctttcagcagcctgtcatattcctgggagcagatgtcactcatcctcca
gccggggatgggaaaaagccctctatcacagctgtggttggcagcatggatgctcaccca
agtcgttactgtgcaacagttcgagtccaacgacccagacaggaaatcattgaagatctg
tcttacatggttcgggagttgctcatacagttctacaaatccacccgatttaaacctacc
cgcattatcttctaccgggatggtgtccctgaaggtcaactcccacagatcctccactat
gagctgctggccatccgcgatgcctgcataaagttggagaaggactatcaaccagggatc
acatatatcgtggtccagaagcgccaccacactcgccttttctgtgccgacaagaatgaa
agaattgggaagagtggaaatatcccagcaggcaccactgtggacaccaacatcactcac
ccatttgaatttgacttctatctgtgtagccatgcgggcatccagggcacaagccgacca
tcccattactatgtcctctgggatgacaaccgtttcacagcagatgagctgcagatcttg
acctaccagctatgtcacacttacgtgcgctgtacacgctccgtctccatcccagcacct
gcctactatgctcgcctcgtggctttccgggcacgctatcacttggtggacaaagagcat
gacagcggtgaggggagccacatatcgggacagagcaatgggcgagatccccaggccctg
gccaaggctgtgcaggttcaccaggacactttgcgcaccatgtactttgcttga
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