KEGG   Sarcophilus harrisii (Tasmanian devil): 100920637
Entry
100920637         CDS       T02286                                 
Symbol
APOE
Name
(RefSeq) apolipoprotein E
  KO
K04524  apolipoprotein E
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04979  Cholesterol metabolism
shr05010  Alzheimer disease
Brite
KEGG Orthology (KO) [BR:shr00001]
 09150 Organismal Systems
  09154 Digestive system
   04979 Cholesterol metabolism
    100920637 (APOE)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100920637 (APOE)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shr04147]
    100920637 (APOE)
   00536 Glycosaminoglycan binding proteins [BR:shr00536]
    100920637 (APOE)
Exosome [BR:shr04147]
 Exosomal proteins
  Exosomal proteins of hepatic cells
   100920637 (APOE)
Glycosaminoglycan binding proteins [BR:shr00536]
 Heparan sulfate / Heparin
  Others
   100920637 (APOE)
SSDB
Motif
Pfam: Apolipoprotein Baculo_PEP_C Phasin ApoLp-III Prominin Apo-CIII DUF1451 ATG17_like Phage_Mu_Gam DUF16 PigL_N DUF3701 CCDC90-like DUF2388 FGase Erp_C DUF5063 DUF4407 NPV_P10 DUF8104 CC_BshC OmpH UPF0184 Exonuc_VII_L GvpQ-like DotZ MSP1_C EMYY_lipop DUF1178 DUF7946 PML_CC Snapin_Pallidin DIT1_PvcA
Other DBs
NCBI-GeneID: 100920637
NCBI-ProteinID: XP_031819094
LinkDB
Position
3:complement(593657768..593659425)
AA seq 303 aa
MKVLWVLWALALLSGCQGQEAGTSSEEERVTDPELWNSEPARAWEMAMGRFQGYLEQLQA
QAENLKSEVHSSQIVRELRSLMADTMKELNAYKAEVDQELAPMAEETRARLGKELTAAQA
RLRADMEDVGARLTQYHREFHAVVNHNVDEVRNRVSAYLRKMKKRLGRDFEELQTRLATY
QTGAKEGVERGLGPLKRLAPALERVQEHNKKTVASLGALAGERLQSHLDQVRSKVDEVRA
KVDEQSAQLQSQLQGFHDRLKAWFQPLADDLQRQWTSLVDKVQEAINPNGKPAEALASPA
VDN
NT seq 912 nt   +upstreamnt  +downstreamnt
atgaaggtcctgtgggtcctgtgggcgctggccctcctgagcggctgccaggggcaggag
gccgggacttcttcggaggaggagcgggtcacggaccctgagctatggaactcggagccc
gcccgggcctgggagatggccatgggccgcttccagggctacctggagcagctgcaggcc
caggcggagaacctcaagagtgaagtgcacagctcccagatcgtccgggagctgaggagt
ctgatggccgacactatgaaggaactgaacgcttacaaggctgaggtggaccaggagctg
gccccgatggccgaggagacgcgggcgcggctgggcaaggagctgacggccgcccaggcc
cgcctcagggccgacatggaggacgtgggggcccgcctgacccagtaccaccgggagttc
cacgccgtggtcaaccacaacgtggacgaggtccggaaccgcgtgtccgcctacctgcgg
aagatgaagaagcggctgggccgcgacttcgaggagctgcagacccgcctggccacctac
cagaccggcgccaaggagggcgtggagaggggcctgggccccctgaagcgcctggccccc
gcgctggagcgcgtgcaggagcacaacaagaagacggtggccagcctgggcgcgctggcc
ggggagcggctgcagagccacctggaccaggtgcgcagcaaggtggacgaggtccgagcc
aaggtggacgagcagtcggcccagctgcagagccagctgcagggcttccacgaccgcctc
aaggcctggttccaacccctggccgacgacctgcagcgccagtggacgtccctggtggac
aaggtccaggaggccatcaaccccaacggcaagccggccgaggcgctcgccagccccgcg
gttgacaactga

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