Sarcophilus harrisii (Tasmanian devil): 100920678
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Entry
100920678 CDS
T02286
Symbol
VIPAS39
Name
(RefSeq) spermatogenesis-defective protein 39 homolog isoform X2
KO
K23287
VPS33B-interacting protein in polarity and apical restriction
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100920678 (VIPAS39)
Membrane trafficking [BR:
shr04131
]
Endosome - Lysosome transport
Others
Others
100920678 (VIPAS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_C
Leuk-A4-hydro_C
Motif
Other DBs
NCBI-GeneID:
100920678
NCBI-ProteinID:
XP_003756254
Ensembl:
ENSSHAG00000004996
UniProt:
A0A7N4NLU4
LinkDB
All DBs
Position
2:302168910..302199450
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AA seq
492 aa
AA seq
DB search
MSRTKVDEEEYWHSSKFKAFTFDDDDDELCQLKESKRAVNSLRDIVDDDDDDLERVSWSG
EPVGSISWSIKETASSGGPALEGREQLKTRNSLSSYPPLPKPASTYSLSSFFKGRSRLGS
FQSLSDALSDVPPKNYAPELRRPKGEYKDYSSDWSLSDTVRRLQKGKVCSLERFRSLQDK
LQLLEEAVTIHDGNVITAVLIFLKRTLSKEILFRELEVRQIALRHLIHFLKEIGDQKMLL
DLFRYLDRTEELALSQYQEHLNIQDPEKRKEFLKSCIGLPFSVEDAAHVQDHYTLLERQI
IIEVNDRHLESSGQTEIFRKHPRKASILNMPLVTTLFYSCFYHYTEPEGTFSSPINLKKT
FKIPDKQYVLTALAARAKLRAWQDVDALFTTKNWLGYTKKRAPIGFHRVVEILHKNNAPV
QVLQEYIRLVEDVDTKLNLATKFKCHDVVIETYRDLKDRQQLIAYRCKVDKASVEEEKID
GILSSTQIRWKN
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcacaaaagttgatgaggaagagtactggcacagctccaagttcaaggctttt
acatttgatgatgatgatgatgaactttgccagttaaaggagtccaaacgggcagtgaac
agccttcgggacattgtggatgatgacgatgatgacttggagagagtcagctggagtgga
gaacctgtggggagcatctcttggtccatcaaagagacagcttccagtggtggtcctgcc
cttgagggacgtgaacagctgaagactcgaaacagcttatcctcctatcctccactcccc
aagcctgcctccacctactctctgagtagcttcttcaaaggaagaagcagacttgggagt
ttccagtccctttcagatgccctctcagatgtacctcccaaaaactatgctcctgagctg
cgaagacctaagggtgaatacaaggattacagcagtgactggagcctcagtgacacagtc
aggcgattgcagaagggtaaggtctgctccttagagaggttccgctccctacaggacaag
ctccaacttctggaagaagcagtgactatccatgatgggaacgtcattactgctgttttg
atcttccttaagaggaccctcagcaaagagatccttttccgagagctagaagtgcgacag
attgccctgagacatctcattcactttcttaaagagataggtgatcagaaaatgctacta
gaccttttcaggtatctggacagaacagaagaacttgcattgtcccagtaccaagaacac
ttaaacatccaagatcctgagaagcggaaggaatttctcaagagttgtattggtttgcca
ttttcagtggaagatgctgctcatgttcaagaccattatacgctcctggaacgacagatc
atcattgaggtaaatgatcgacatttagaatcttcagggcagacagaaatcttccggaaa
catccacgtaaggcctccatcctcaacatgccactggtgacaactctcttctactcctgc
ttttaccattacacagaacctgagggaacatttagcagtcccatcaatctgaaaaaaact
tttaagattcctgacaagcaatatgtactgacagcactggctgcccgtgccaaactccga
gcatggcaggatgtggatgccctcttcaccaccaagaattggctaggatataccaagaag
agagctcccattggcttccatcgagttgtggaaattctgcacaagaacaatgcccctgta
caggtcttacaagaatatatccgacttgtggaagatgtagacacaaagctgaatcttgct
accaaatttaagtgccatgatgtggtcattgaaacatatcgggacctgaaggatcggcag
caattaatagcttataggtgtaaggtggataaagcatctgtagaagaggagaagattgac
ggcattctaagtagtacgcaaattcgatggaagaactaa
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