Sarcophilus harrisii (Tasmanian devil): 100920702
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Entry
100920702 CDS
T02286
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shr01002
]
100920702 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
100920702 (USP42)
Enzymes [BR:
shr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100920702 (USP42)
Peptidases and inhibitors [BR:
shr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100920702 (USP42)
Ubiquitin system [BR:
shr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100920702 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
100920702
NCBI-ProteinID:
XP_031797669
Ensembl:
ENSSHAG00000013089
UniProt:
A0A7N4PL56
LinkDB
All DBs
Position
1:269879641..269951372
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AA seq
1400 aa
AA seq
DB search
MTIVDKVSESSNPSACQNQPGSSVAPSLGDMDSGSASWGAVSSLTDIPKHKISLGPVPGA
AIYSNSSISDKPKPSAQKDQSTGDGIAPPQKVLFPAEKICLKWQQSHRVGAGLQNLGNTC
FVNAALQCLTYTPPLANYMLSHEHSKICHEQGFCMMCTMQAHITQALNNPGNVIKPMPVI
NDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSTKLDRHSQATTLVCQIFGGYLRS
RVKCMNCKGVSDTFDPYLDIPLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFSGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVL
VHTGFSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVLNQQAYVLFYIRSHDVKNGGE
HTHSIHTPGQSSPRPVINQRVVNNKQTVSGFIGPQLPPHMIKNSNHLNGTGPLKETPSCS
VASASNSNLNRTSPASASTSIQNWTVNRPSIIPEPPKKQKITISIHNKLPVRQGQSQPNL
HNSSLENLSKSIPSSTITNSSALQSTSNASTMSVATKVSKQITPSESCSKPVMNGKSKLT
SSVLVPYGAESSEESDEESKGLGKENGHAKPLNGLLTGNGISILPNACSSCQDAEDDEAS
HHELPETVTVNGANSIENSEPKENGLSFDDPTCQVKPAKHSENPFSKTNGLHGKLMPTPL
PPLPEDRIVESFRFNNKLKSLTDDISSSGNEKPPEEELGTELVVGSSSSASYEQLDKVTS
SLSCKIKNTFPPSDPNVIATKEEITESIIAKPEESIPNIISHCNANKKTIGDDQFPKQCD
PGNFTDEKIILSQEIKGTVKENSLNSAAVDTMEKLSQTPSNNFDTECDSNKLLVFISTEK
CKETKDLSKSIDMSTNELSATQLDKIIENHYSKGSTEQNNSERCEENKVRQKVQSNSPVK
EKGNSPRKADKGHHHNRRDRSSSGERTKQSRSKTENHYYKKRVSYSKERTKKSRHKSEHC
NGSKYKPFHNESSSPDSRSLGKHNHYQSRSRGKSDQERGRYYHSKSERSWSREKYYPDGV
RRWDKYRYYNDYYSYSSRDGREWKPSHSDREYDKASQYNNRSHKDYYKSKWVHEPAPKEK
ERHHSNSNKVDLSHCSSLPQHPEKYSHDKIALEENSSNLCSQFHEHDIVKMRKRKYDSIE
NDSDLEKKIPKPLQNEPVEEQKVKKHKKSKKKKKSKDKHRARSCKHHQDLDLSVANSKAD
LRKHKKKKKKKKKHAKKLEDYIEHSDLHVLKASCSETDNKIWEKKDKSPIKDGLPSEDYQ
KSNKLSHEEDDDHPEKTKHLRMESQDHKCHPAEYGQAKDLPSHKDYSQKFSSKQLDDSST
STDESRWKVNENSSSKEKLH
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgactatagttgacaaagtatctgaatcttccaacccatcagcttgtcagaatcaacct
ggcagctctgtggcaccttcactcggagacatggactcaggctctgcaagttggggagct
gtatcttctttgacagacatccccaaacacaaaatttctttaggaccagtacctggtgct
gcaatttattctaattcatctatttccgacaaaccaaagccatcagcacagaaggatcaa
tctacaggtgatggcattgcacctcctcagaaggtcctttttccagccgaaaaaatttgc
ctaaagtggcaacaatctcatagagttggagctgggctccagaatctgggcaatacgtgt
tttgtcaatgctgcactgcagtgtttaacatatacgccacctcttgccaactatatgtta
tctcatgaacactccaaaatatgccatgagcaaggattctgtatgatgtgtaccatgcag
gcccatattacacaggcactcaataatcctggtaatgtcatcaaaccaatgccagttatc
aatgatcttcgacgtatagctaaacacttccgttttggaaaccaggaagatgcccatgaa
tttcttcgatacactgttgatgcaatgcagaaagcatgcctgaatggcagcactaaattg
gaccggcactcccaggctaccacacttgtttgtcaaatatttggaggctatctgagatct
cgagtaaagtgtatgaactgcaaaggagtttctgatacctttgatccataccttgatatt
ccattggaaataaaggctgcccagagtgtcaacaaagccttggaacaatttgtgaagcct
gagcaattagatggagaaaattcctataaatgtagcaagtgtaaaaagatggttccagct
tcaaagaggtttactatacatagatcatctaatgttcttaccttatctttgaaacgtttt
gcaaatttcagtggtggaaaaattgccaaggatgtgaaatatcctgagtatctcgatatt
cgaccatatatgtctcaacctaatggagaaccaattatttatgttctatatgcagtgtta
gtgcatactggttttagctgtcatgctggtcattactactgttacataaaggctagtaat
ggacagtggtaccagatgaatgactccattgtttctaccagtgatatcagatcagtgctt
aaccagcaagcctatgtcctcttttatatcagatcccatgatgtaaaaaatggaggggaa
cacactcattccattcatactccaggacagtcttctcctcgaccagtgatcaatcaacgg
gtagtcaataataaacagactgtgtcaggttttattggaccacaacttcctcctcatatg
ataaagaattctaatcacttaaatggaactggaccattgaaagaaactccaagctgttct
gtggcaagtgctagtaattctaatttaaacagaacaagtcctgcttctgcttcaacttct
attcaaaactggacagttaacagaccctcaattattcctgagcctcctaagaagcaaaaa
atcactatcagtattcataataagttgcctgttcgacaaggtcagtcccaacctaatctt
cacaatagttctttagaaaacctcagcaagtccattccctcatctaccattactaattct
tctgcattacaatctacctcaaatgcatctacaatgtcagttgctactaaagtatcaaaa
cagatcacacctagtgaatcttgttccaagccagtaatgaatggcaaatccaagctcacc
tccagtgtgctggtcccttatggtgcagagtcttcagaagaatctgatgaggagtcaaag
ggattgggtaaggagaatggccatgcaaaacctcttaatggacttctgactggaaatgga
atcagtatactcccaaatgcttgttcttcctgtcaagatgctgaagatgatgaggcttct
catcatgaactgccagaaactgtgacagtaaatggtgctaatagtatagagaatagtgaa
cctaaagaaaatggactatcatttgatgatcccacttgccaagtcaagcctgctaaacat
tcagaaaatcccttttctaagacaaatggattacatggaaagttgatgcctactcctttg
cctccactcccagaagacagaattgtagagtctttcagattcaacaacaaattaaaaagt
ttgactgatgatataagttcaagtggaaatgagaaaccacctgaagaagaacttggtaca
gaacttgtggttggtagcagcagttcagcttcctatgaacagctagataaagttacttcc
agtcttagctgcaaaataaagaatacctttccaccttcagaccctaatgtcattgctacc
aaagaagaaattactgaaagtattatagcaaaaccagaagaatctattcccaatatcatt
agtcattgtaatgctaacaagaaaaccattggagatgatcagtttcctaaacagtgtgat
cctgggaatttcacagatgaaaagatcatattatcccaagaaataaagggaacagtaaag
gagaattctctgaactctgcagcagtggacacaatggaaaaattgagccaaactccttcc
aataattttgacactgaatgtgatagtaataaactcttagtatttattagtactgaaaaa
tgcaaagaaacaaaggacctttctaaaagtatagacatgtctactaatgaactgtctgct
acccagttagataaaattatagagaatcattattcaaaagggagcactgaacaaaataat
agtgaacgatgtgaagaaaataaagttagacaaaaagttcaaagtaattctccagttaag
gaaaaaggtaatagccctagaaaagcggacaaagggcatcatcataaccgaagagatcgt
tcatccagtggagaacgaacaaagcaaagcaggagcaaaacagagaaccattattacaaa
aaaagggtgtcttatagcaaagagaggaccaaaaagagccgccacaaatcagaacactgt
aatggaagcaaatataaaccttttcataacgaaagcagcagccctgacagtagatcctta
ggaaaacataaccattatcagtccagaagtagaggaaaatctgatcaggaaaggggtaga
tattatcattctaaaagtgaacgatcttggagtcgggagaaatattatccagatggagta
agaagatgggacaaatatagatattataatgattattattcttattcttcaagagatggt
agagagtggaagccatctcacagtgatcgagaatatgacaaagcaagtcagtacaataat
agatcacacaaggactattataaaagcaaatgggttcatgagccagcacctaaagagaaa
gaaaggcatcactcaaacagtaataaagtagatctatcccattgttcctctcttcctcaa
catcctgaaaaatactctcatgacaaaattgcacttgaagaaaatagttcaaatctttgt
agtcaatttcatgagcatgacattgtaaaaatgaggaaaaggaaatatgatagtatagaa
aatgacagtgacttagaaaagaaaatccccaaacccttgcaaaatgagccagtagaagag
cagaaagttaagaagcacaaaaaatcgaaaaagaaaaagaaatccaaagacaaacacaga
gctcgaagttgcaagcatcatcaggatttggatctttctgtagccaactccaaagctgac
cttcgcaaacacaaaaagaagaagaagaaaaagaagaaacatgcaaaaaaattagaggac
tatattgaacattcagatcttcatgtactcaaggcttcctgctctgagactgataacaaa
atctgggagaaaaaggacaaatctcccatcaaagatggcttgccatctgaggactaccag
aaatctaataaactttctcatgaggaagatgatgatcaccctgagaaaaccaaacactta
agaatggaaagccaggatcataaatgtcacccagctgagtatggccaggctaaagacctc
ccctctcataaggactacagtcagaagttttccagtaaacagttggatgacagttctaca
agtacagatgaatctagatggaaagtgaatgaaaactcatcctcaaaagaaaaattacac
tag
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