Sarcophilus harrisii (Tasmanian devil): 100920744
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Entry
100920744 CDS
T02286
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shr03041
]
100920744 (DDX17)
Enzymes [BR:
shr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100920744 (DDX17)
Spliceosome [BR:
shr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100920744 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100920744
NCBI-ProteinID:
XP_031795754
Ensembl:
ENSSHAG00000004578
UniProt:
G3VPX7
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All DBs
Position
5:12821664..12840202
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AA seq
650 aa
AA seq
DB search
MRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVEHP
EVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQNFTEPTPIQC
QGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQ
VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRC
TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINV
GNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR
RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSS
EDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGG
GGGGRSRYRTTSSVNNPNLMYQDECDRRLRGVKDGSRRDSGSYRDRGDTDRAGYANGSGY
GSPNSAFGAQAGQYTYGQGTYGAAAYGTSGYAAQEYGAGTYGASSTASTGRSSQSSSQQY
SGLGRSGQQPQPLMSQQFPQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggaggcggcttcggagaccgcgaccgggaccgggaccgcggagggtttggagca
agaggaggtggaggcctgcctccgaagaaatttggtaatcctggggaacgtttgcgcaaa
aagaaatgggacctgagtgaactgccaaagtttgagaagaacttttatgtggaacatcct
gaagtagccaggcttactccgtatgaggttgatgaactgcgccggaagaaggagatcaca
gtgagagggggagatgtttgtcctaagccagtatttgccttccatcatgctaactttcct
cagtatgtgatggatgtgttaatggatcagaacttcacagaaccaactccaattcagtgc
cagggatttccattggctcttagtggccgggatatggtgggcattgcccaaactggctct
gggaagactttggcgtatttgctgcctgcaattgttcatatcaaccatcagccatatttg
gagaggggggatggcccgatttgcctggttctggcgcctacccgagaactggcccagcaa
gtacagcaagtagctgatgattatggcaagtgctctcgattaaaaagtacttgtatatat
ggaggtgctccgaaaggtccccagattcgcgatttggagagaggtgttgaaatctgcata
gccactcctggccgcctgatagattttctagaatcagggaagaccaatcttcgtcgttgt
acgtaccttgtattggatgaggctgacaggatgcttgatatgggttttgagcctcagatt
cgaaagattgtggaccaaatcaggcctgacagacaaaccctgatgtggagtgccacctgg
ccaaaagaggttcgacagcttgccgaggatttccttcgtgactatacccagatcaatgtg
gggaatctggagctgagtgccaaccacaacatcttgcagattgtggatgtttgcatggag
agcgagaaggaccacaaactgatccagctaatggaggaaataatggctgaaaaagaaaat
aagaccataatctttgtggagacaaaaagacggtgtgatgacctgacccggaggatgcgc
agagatggatggccagctatgtgtatccatggcgacaagagtcaaccagaaagagattgg
gtactcaatgaattccgttcagggaaggctcccatcctcattgctacagatgtagcctct
cgtgggctagatgtggaagatgtaaagtttgtgatcaactatgactacccaaacagctca
gaagattatgtgcatcgaattggccgaacagcccgaagcaccaacaaaggcactgcctac
acattcttcaccccgggaaacctaaaacaagctagggagctaatcaaggtgttagaggag
gccaatcaggccatcaacccgaaactgatgcagctggtggaccacagaggaggtggtgga
ggagggggtggacgttctcgataccgtaccacctcctcggtcaacaatcccaatctgatg
taccaggatgaatgtgaccgcaggcttcgaggagttaaagatggtagccggagagactct
ggaagctatcgtgatcgtggagatacggacagagctggttatgccaatggcagtggctac
ggcagtcccaattctgcctttggagctcaagcgggccagtacacctatggccaaggcacc
tatggggcagctgcttatggcaccagtggctacgcagctcaagaatatggagctggtacc
tatggtgctagtagcaccgcctcaactgggagaagctctcagagctccagccagcagtat
agtggcctgggccggtcagggcagcagcctcagcctctgatgtctcagcagtttccacag
cctcctggggctactaacatgataggttacatggggcagactgcctatcagtatcctccc
cctccccctcctccgcctccctcccgtaaatga
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