Sarcophilus harrisii (Tasmanian devil): 100920752
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Entry
100920752 CDS
T02286
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100920752 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100920752 (SMARCAD1)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100920752 (SMARCAD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
CUE
Motif
Other DBs
NCBI-GeneID:
100920752
NCBI-ProteinID:
XP_012407424
Ensembl:
ENSSHAG00000001279
UniProt:
G3VE33
LinkDB
All DBs
Position
6:138981082..139067095
Genome browser
AA seq
1027 aa
AA seq
DB search
MSLFNLDRFRFEKRNKIQEQPEPAPQLPPPPTPLPSQVEPPSPVSTIIEDDDLEGGKGSR
PGTPDSDITEKTEDSSVPETPEPERKSGVSYFKNQKGIQFIDLSSDSEDFGSPNCSNINQ
DEKSGREPVIIVSEQSEDEQTEEYTDMTQRNDDISELEDLKDAKLQTLKELFPQGSDSDL
IKLIESTSTMDGAIAAALLMFGEGIPRKRKLDSSSSYTSEDEDDDQTVKRKRFNPLEESK
DFEESEDKWEKQEAIVAKLQTEFPSLAKEELREVLKEHEWMYNEALESLRVFAEDQQDVQ
YPSKSEISNGKAISRKSQNHLKNTSKTKMKQKCAVKAQNGFNKKGKKTFFNPKKEIQDSE
YDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQGASIGELTLIPQCSQKKAQKITELR
PFNSWEALFTKMCKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTRLTEG
GGGWNIDQPSILNQSLSLKPYQKIGLNWLALLHKHGLNGILADEMGLGKTIQAISFLAYL
YQEGNRGPHLIVVPASTLDNWIREVNLWCSNLDVLFYYGSQEDRKQLRYDIHNKVVDFNV
IVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSVRYQHLMTINAKNRLLLTGTP
VQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKAKSAEEQSIYEKERIAHAKQIIKPFI
LRRVKEEVLKQLPPKKDCVELCAMSEKQEQLYFGLFNKMKKSINGMEKSSEMGNVMMQLR
KMANHPLLHRQYYTAEKLKIMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHLLCKQYAH
INDFMLDMDLILDSGKFKKLECILSELKEKGDRVVLFSQFTMMLDILEVLLKHHQHRYLR
LDGKTQISERIHLIDQFNTDMDIFIFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQA
EDRCHRVGQTKEVHVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGNVPADIATL
LKTSLGL
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcttcaacctggaccggttccgctttgagaagagaaataaaattcaggaacag
cccgagccagctccccagctgcctcctcctcctactccacttccttctcaggttgagcct
ccttcacccgtttccactattattgaagatgacgatcttgaagggggtaaaggcagcagg
ccaggaacaccagattcagatataacagaaaaaacagaagattccagtgtaccagaaact
ccagagcctgaaagaaagtcaggtgtatcatatttcaagaatcaaaaaggaatacagttt
atcgatctgtcttctgacagtgaagattttggctccccaaattgttccaatataaatcaa
gacgaaaagtctggaagagaaccagtgattatagtttctgagcaatctgaagatgagcag
actgaagagtatactgatatgacacaaagaaatgatgatatctcagaactggaagacctt
aaagatgcaaagcttcagactttgaaggaactatttccacaaggaagtgacagtgattta
attaagttgattgaatcaacaagtacaatggatggagcaatagctgctgcattgctgatg
tttggagaaggtatacctcggaaaagaaaattagattcatcttcctcatacacctctgaa
gatgaggatgatgatcaaactgtaaaaaggaaacgattcaatcctcttgaagaatcaaag
gattttgaagaatcagaggataaatgggaaaagcaggaagccattgtagcaaagctacag
acagagttccccagtttggctaaagaggaactaagagaagtacttaaggaacacgaatgg
atgtataatgaagctttggaatctttaagagtctttgctgaagatcaacaagatgtacag
tatccttcaaaaagtgaaatttcaaatggaaaagctatctcaagaaaaagtcaaaatcac
cttaaaaatacttctaaaacaaagatgaaacaaaaatgtgctgttaaagcacagaatggt
tttaacaagaaaggcaaaaaaacttttttcaatcctaaaaaggaaattcaggactctgaa
tatgattcaggctctgatgttgggagctctttggacgaggactatagcagtggtgaggag
gtgatggaagatggctacaaaggtaaaatacttcacttcctacaaggggcttcaattggt
gaactcactttgattccccagtgttctcagaaaaaagctcagaagataacagagctccgg
ccctttaacagttgggaagctctgtttacaaaaatgtgcaagacaaatggattgtcagaa
gacttaatatggcactgtaaaacattgattcaagaaagggatgtagttattagacttatg
aacaaatgcgaagatatttcaaataaattgacaaaacaggtgaccaggcttactgaaggt
ggaggtggatggaacatagatcaaccttccattctaaaccaaagtttgtctctcaagcca
tatcagaagattggtttgaattggctagcactgctacataaacatggactaaatggtatt
ttggctgatgaaatgggattagggaaaacaattcaagccatttcctttctggcatacctc
taccaagaaggtaatagaggtcctcatttaattgttgtgccagcttcaactttagacaac
tggataagagaagttaatttatggtgctctaacctagatgtcctcttttattatggttct
caagaagatcgcaaacagcttagatacgatattcataataaagttgtagacttcaatgtg
attgtgactacgtacaattgtgcaatcagcagttcagatgaccgcagtctatttcgacgg
ctgaaacttaactatgcaatcttcgatgagggccacatgttgaaaaatatgggttctgtg
cgctaccagcacctcatgaccattaacgcaaagaatcgtctgctacttacaggcactcct
gttcagaacaatctattggaactcatgtctctgttgaattttgtgatgcctcatatgttc
agtagtagcaccagtgaaatcagaagaatgttctcttccaaagcaaaatcagctgaagaa
caaagtatatatgaaaaggagagaatagcacatgctaagcaaattataaagccatttatt
ctgagaagagttaaagaagaggtcctaaagcagctacctcccaaaaaagactgtgttgaa
ctctgtgcaatgtcagaaaaacaagaacagttgtactttggtctttttaacaaaatgaag
aaatccatcaatggcatggagaaaagctcagaaatgggcaatgtgatgatgcaactaaga
aaaatggccaatcaccctttattacatcgtcaatattacacagctgaaaaactcaaaata
atgtcacagctgatgctaaaggaacctacacattgtgaagctaatcctgacctgattttt
gaagacatggaagtcatgacagactttgaactacatttactttgtaaacagtatgcacat
attaatgactttatgttagacatggatctcattttggactccgggaaattcaagaaacta
gaatgcattttatctgaattaaaagaaaagggtgacagggttgtattatttagccagttt
acaatgatgctggacatcttagaggttcttctaaaacaccatcagcatagatatcttaga
ttggatggaaagactcaaatttctgaaagaattcatctaattgaccagttcaatacagac
atggatatctttatatttcttctatcaacaaaagctggtggacttggcataaatttgacc
tctgcaaatgttgtcatacttcatgatattgactgtaatccatataatgacaaacaagct
gaagatcgatgccacagagtaggtcagactaaagaagtacatgtcataaagttaataagt
caaggaacaatagaagagtctatgctcaaaatcaaccaacagaaactgaaactagaacaa
gatatgactacagtagatgaaggtgatgaaggaaatgtacctgcagatatagctacatta
ctaaagacttcattgggtctctaa
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