Sarcophilus harrisii (Tasmanian devil): 100920813
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Entry
100920813 CDS
T02286
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100920813 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100920813 (DHX36)
03012 Translation factors [BR:
shr03012
]
100920813 (DHX36)
Enzymes [BR:
shr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100920813 (DHX36)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100920813 (DHX36)
Translation factors [BR:
shr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100920813 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
ATPase
AAA_14
NACHT
AAA_23
NPHP3_N
ABC_tran
Motif
Other DBs
NCBI-GeneID:
100920813
NCBI-ProteinID:
XP_031813404
Ensembl:
ENSSHAG00000016292
UniProt:
G3WUT3
LinkDB
All DBs
Position
3:complement(13041771..13086282)
Genome browser
AA seq
1008 aa
AA seq
DB search
MSYEHRQSWGRDGGGPRGSSNGGYGGNRGGGGSRGGGGGGGGGRGRHPGHLKGREIGLWY
ARKQGQKSKDAERQERAVVRMDERREEQIVQLLNSVQTKNDKDSQPQISWFSPEDHGYGT
EIPVQNKPPSEKKFLEKEKKPLDQEKKFVDRGKKLTERGKSFVDRDSEYLLQENEPDVDL
DQLLKEDLKRKKSDPRYIEMQHFREKLPSYGMQKELVNLINNNQVTVISGETGCGKTTQV
TQFILDDYIERGKGSACRIVCTQPRRISAISVAERVATERAEPCGSGHSTGYQIRLQSRL
PRKQGSILYCTTGIILQWLQSDPQLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDL
KVILMSATLNAEKFSEYFDHSPMIHIPGFTFPVAEYLLEDVIEKIRYTPENTDRKPQFKR
GFMQGHVNRPEKEEKEAIYKERWPDYVRQLRGRYSANTIDVLEMMDDDKVDLNLIAALIR
HIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKRT
PPGVRKIVIATNIAETSITIDDVVHVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRK
GRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMD
PPSHDAVLLSINHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLT
IAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLTVVNAFEGWEEARRRGFRFEKDY
CWEYFLSSNTLQMLHNMKGQFAEHLLAAGFVSSKNPKDPKSNINSDNEKIIKAVICAGLY
PKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEESEFHYNWLIYHLKMRTSSIYLY
DCTEVSPYCLLFFGGDISIQKDKDQDTIAVDEWIVFQSPARIAHLVKELRKELDALLQEK
IENPHPVDWKETQSRDCAVLSAILDLIKTQENGTPRNFSPRFQDGYYS
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcaccgccagagctggggccgcgatggtggcgggccccgcggttcgagc
aacggcgggtacggaggaaaccgcggcgggggcggaagccggggcggcggcggcggcggc
ggcggaggccggggccggcatcccggacacctgaagggccgcgaaataggcctttggtac
gcaaggaagcagggccagaagagcaaggacgccgagcgccaggagagagctgtagtgcgt
atggatgaacgtcgagaagaacaaattgtacagctgttgaattctgtccaaactaagaat
gataaagattctcagccgcagatatcctggttttctcctgaggatcatggatatggcact
gaaattcctgtccagaacaaaccaccttcagaaaagaaatttttggaaaaggaaaagaaa
cctttggaccaagaaaagaagtttgtagaccgaggcaagaaattgactgaaaggggaaaa
tcatttgtagatagagattctgaatatctcttgcaagagaatgagccagatgtggattta
gaccagctacttaaggaagatctgaaaagaaagaagtctgatccccgctatattgaaatg
cagcatttccgggagaagctgccctcatatggaatgcaaaaggaattggtaaatttgata
aataacaatcaggttactgtcataagtggtgagactggttgtgggaaaaccacccaagtt
acccagttcatcctagatgactatatcgaaagaggaaaaggatccgcctgccggatagtg
tgtacacagcccagaagaatcagtgcaatttcggttgcagagagagtggccacagagaga
gccgaaccatgtggcagcggccacagtactgggtaccagatccgcctccagagccggttg
ccaaggaaacaaggctccattttgtactgtacaacaggaatcattcttcagtggctccag
tcagatccgcaattatccagtgttagtcacattgtacttgatgaaatccatgaaaggaat
ctgcagtcagatgttttaatgactgttattaaagatctcctaaactttcgacctgacctg
aaagtaattctgatgagtgcaactttgaatgctgagaagttttcggaatattttgatcat
agtccaatgattcacatacctggtttcacattccctgttgctgaatatcttttagaagat
gtgattgaaaagataaggtatacaccagaaaatacagatcgcaaaccccagtttaagagg
ggttttatgcaaggtcatgtaaatagaccagaaaaagaagagaaggaagcaatttataaa
gaacgctggccagactatgtaaggcagctgcgaggaaggtattcagcaaataccatagat
gttttagaaatgatggatgatgataaagttgatctgaatttaattgctgcacttatccga
cacattgttttggaagaagaggatggtgcgatcttggtattcctcccaggctgggacaac
atcagcactttgcatgacctcttgatgtcacaggtcatgtttaaatcagataggttcatt
ataatacctttgcactcattgatgcctactgttaaccagacacaggtatttaaaaggacc
ccgcctggtgttcggaaaatagtcattgctacgaatattgcagaaacaagtatcaccata
gatgatgtcgttcatgtgattgatggtggaaaaataaaagaaacccactttgacacccag
aataacatcagtacaatggcagcagagtgggttagtaaagcaaatgccaagcagaggaaa
ggacgtgctgggagagttcaaccaggtcactgctatcatctgtataatggtcttcgagcc
agccttctggacgactatcagttaccagaaattttgagaacaccattagaagaactgtgt
ttacaaataaagattttaaggttaggcggaattgcttatttcctaagcaggttaatggac
ccaccatctcatgatgccgttttactgtctataaatcatctaatggaattgaatgctttg
gataagcaagaagaattgacccctcttggagtccatttagcacgattgccagttgagcca
catattgggaaaatgattctctttggagcccttttttgctgcttagacccagtccttacc
attgcagctagtcttagcttcaaagatccctttgtcattccactgggcaaagaaaaagtg
gccgatgccaggaggaaggaattgtcaaagaatacgaaaagtgaccacttgacagttgtg
aatgcttttgagggatgggaagaggcgaggagacgtggtttccggtttgaaaaggactat
tgctgggagtactttctctcttcaaacacactacagatgctgcacaacatgaagggacag
tttgccgagcaccttcttgctgctggatttgtgagcagcaagaacccaaaagatcccaaa
tcaaatattaattcggataatgaaaagataatcaaagcggttatctgcgctggcttatat
cccaaagttgctaaaatccggccaagttttagtaaaaaaaggaaaatggtgaaagtttgc
accaaaactgatggaacagttaacattcatcctaaatctgtaaatgttgaagagtcagag
ttccattataactggctgatctaccatctgaagatgagaacaagcagcatatatttatat
gactgcacagaggtgtctccctactgtctcttattctttggaggtgatatttccattcag
aaagataaagatcaagatactattgctgtagatgaatggattgtcttccagtctccagca
agaattgcccatcttgttaaggaattaagaaaagaacttgacgcccttttgcaagaaaag
attgagaaccctcatcccgtggattggaaagagactcagtccagagattgtgctgtgctg
tccgctatcctagacttgatcaaaactcaggaaaatgggacacccaggaacttttcccca
cgattccaggatggatactacagttga
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