Sarcophilus harrisii (Tasmanian devil): 100920858
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Entry
100920858 CDS
T02286
Name
(RefSeq) protocadherin beta-2-like
KO
K16494
protocadherin beta
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100920858
Cell adhesion molecules [BR:
shr04515
]
Cadherins
Protocadherins
100920858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
MgtE
Motif
Other DBs
NCBI-GeneID:
100920858
NCBI-ProteinID:
XP_031809281
LinkDB
All DBs
Position
2:373976259..373979384
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AA seq
787 aa
AA seq
DB search
MEQEGRMIPQQRQVLFFLVLLGVSGAASELEFSVVEEMERGSFVANVAKALGLEVGVLSN
RGARVVFKGYKEYLQLNSKTGDLFLRETLDREELCGPTKPCVLPFQILLENPFQVVRSEL
KIQDVNDHSPVFLDIETILKIPESTSPGTVFLLENAQDLDVGNNSLQNYTVSPNSHFHIQ
IREDAEGRKYPELVLDKPLDREEQPEFRLTLTAVDGGVPAKSGSTQILVLVMDINDNAPV
FSHSRYEVQLPENSPTGSLVATVSAKDLDSGNNAEISYSLFRASERIRKTFQLNEKSGEL
RLKEKLDFESIHTYTINIQATDGGGLSGKCTIVVQVKDLNDNPPELIMSSFTSPIPENLP
EITVAVFSVSDVDSGENGRIVCSIQDDLPFVLKPSFENFYTLVTDGALDRENKEEYNITI
TVTDLGSPRLKTEYNFTVLISDVNDNPPVFSQRVYKLYLQENNSPALHIGSVSASDRDSG
INAKVTYSLLPPESEDLPLFSYISINSDNGYLYALRSLDYEAIQAFQFIVRAADGGSPSL
SSQVLVQIVVQDENDNSPFVLYPLQNGTAPCNDLVPRTAEPGYLVTKVVAVDRDWGQNSW
LSYQLVKSTDPGLFTLWAHNGEVRTTRPISDRDAIKQRLVVLVKDNGQPALSTMATLNVL
LVDGFSELYVKIPDSNKEQIQNDSLTLYLVISLASVSILFLVSIILFITIRLWKRKTNKG
NSHFLSSAPFQSHLVDVSGTGTLSQSYKYEVSLTNDLGTSEFKFLKPIIPSFPLQKSGND
AENNPAS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggaagggaggatgattccgcagcaaaggcaagttctttttttccttgttctg
ctgggtgtgtctggggcggcctcagaactggagttttcggtggtggaggagatggagaga
ggctcttttgtggccaatgtggcaaaggctctggggctggaggtaggagtgttgtcaaat
cggggggccagagtcgttttcaaagggtacaaagagtatttgcagctgaattctaaaaca
ggggatctgttcctgagagaaacattggatcgggaggagctgtgcggtccgactaagccc
tgtgtgctaccttttcagatcttactggaaaacccttttcaggtcgttcgctctgagctt
aagatacaagacgttaatgaccattcgccagtattcctagacattgagacaatcctaaaa
atccccgagagtacctcccccgggactgtgtttctattagaaaatgcgcaggatttagac
gtagggaacaacagtctccagaactacacggtcagcccaaactctcatttccacattcaa
attcgagaggacgcagaaggccggaaatacccagagcttgtactggataaacccctggat
cgggaggaacagcccgagtttagattaactctcactgcagtggatgggggagtcccagcc
aagtctggaagtacccaaatcctagtgttggtaatggacatcaatgacaatgcccctgtg
ttctctcattcccggtatgaagttcagcttcctgagaacagccctacgggttccctagtt
gctacagtctcagctaaagatttagattcaggaaataatgcagagatttcctattcgtta
tttcgtgcatctgaacgtattcgtaaaaccttccaattaaatgaaaaatccggagaactt
cgtctaaaagagaaactggattttgagtcaattcatacttacacaataaatattcaggcc
acagatggtggaggcctttctggaaaatgcactatagttgttcaagtgaaggatttaaat
gacaaccctccggagctgattatgtcctcatttaccagccccatcccagagaacttgcct
gagataactgtcgctgttttcagcgtatcagatgtagactctggggaaaatggaagaata
gtttgctccatccaagatgatcttccctttgtcctaaaaccttcttttgaaaacttctat
acgttggtaacagatggagcattggacagagagaacaaggaagaatataatatcactatt
actgtcacagacttggggtctcctaggctcaaaaccgagtacaatttcacagtattaatc
tccgatgtcaatgataaccctccagtgttttctcagagagtctacaaattgtacctgcag
gagaataacagtcctgccctccacattggcagtgtcagtgccagtgacagggactcagga
atcaatgccaaagtcacctactctctgctgcctccagagtctgaagacctgcccctcttc
tcctacatttccatcaactcagacaatggctatctctatgctctgagatctctggattat
gaagccatccaagctttccagttcattgttagagcagctgatggtggttctccatcactg
agcagccaggttcttgttcagattgtggtacaggatgagaatgataactccccctttgtt
ctgtaccccctgcagaatggcacagctccctgcaatgatctggtgcccagaactgcagag
cctggttacctggttaccaaggtggtagctgtggatagggactggggacaaaattcctgg
ctttcctaccagctggtcaagtccacagacccaggtctcttcactttgtgggcccacaat
ggagaagttcgcacaactaggcccattagtgacagagatgctatcaagcagaggcttgtg
gtgctggtgaaagacaatgggcagccagctctctccacaatggctacactaaatgtgctc
ctggtggatggtttctcagaactatatgtgaagatcccagactcgaacaaggagcagatc
caaaatgactccctcactctttacttggtcatttctctggcttcagtgtccattctattt
cttgtctctatcattctgtttatcaccataagactgtggaaaagaaagactaataaagga
aatagtcactttctatccagcgctcccttccagagccatttggtggatgtcagtggcact
gggaccttgtctcagagctacaaatatgaagtatctctgaccaatgacttagggacaagt
gagttcaagttcttaaagccaattattcccagttttcctcttcaaaaatctgggaatgat
gcagagaacaatccagcatcttag
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