Sarcophilus harrisii (Tasmanian devil): 100920884
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Entry
100920884 CDS
T02286
Symbol
PKD1L1
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 1
KO
K04987
polycystin 1L1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
shr03037
]
100920884 (PKD1L1)
04040 Ion channels [BR:
shr04040
]
100920884 (PKD1L1)
Cilium and associated proteins [BR:
shr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100920884 (PKD1L1)
Ion channels [BR:
shr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100920884 (PKD1L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
PKD_4
Polycystin_dom
PLAT
PKD_channel
GPS
Motif
Other DBs
NCBI-GeneID:
100920884
NCBI-ProteinID:
XP_031821419
LinkDB
All DBs
Position
1:74693651..74848780
Genome browser
AA seq
2894 aa
AA seq
DB search
MLNAGTVVPMEGGFWKQTWRLLIQVMLFWILLAASIPGNNSNDDSEDGICWFLGCNNSXA
LKXVKAEYLTASDFERDSFDYSKFCAPDRHPKIAYLFYQDDSGNIISYMXILRVLTVSMQ
TRKAKTKDNQRLDXGHLCIPKNFICNWTLENDLLLTSGIPIIVCRCLEMRLHIIGLTVSN
VTSTAPIQDLFNVTLEKVGVGLLESDNSSPAVLILLPLKHISKTVKNLISSFNDEKKQTL
PIWGSSNNRSINITFNVPEICDLSVSVFNPHNHILFIQCLAGHIRIGGSYIDGKSAFPLK
MNQTSLWMPENNKQFSQELGFGVHTSSDNITSLVFDFGDGTVVQVSIQDGSDEIEIITYH
QYRKEGTYMIKVIIFNEFHGNEKELGPYYVEIAQQDLRVFMNSSSVHKDEILFFASSLQR
TTTGKYTRSMSDYTISMNKGPIVIHKFSSTSSYNVFLMVPNRTNGCQDWTNVNVQYQMQA
VSIFTNGTVFASDSEVTFFVHTNEMSPLEFVWHFGDGSWTRTTSRSVKKRYSVPKKYYVI
VNAANQINSVASNIHTISIERKIVPNRLVSSSSALINSSVTFECRINFGTNVTYIWNFGD
DTIHPGKWVESHIYTREGEFTVEVLIFNSVSIATLKKQVFIVSKPCQPPLVKNMGPGRIQ
IWRHQPVKLGVTFEAPIQCDISQGLNYSWSLMKSDGSLVLLPTALNKHRQTILLPSYFLE
YGNYTALAKVKIEGSMVYSNYSAVIEVVSQSPVSVISEGTHLLISKTLFSIIVLNGSQSF
DPDYPGTHLKYYWKCVPASKPKHTCFNSLKFNNSASVISFPASLLYDSYDQFLVTLMVSN
GNRNSSEAQVFLSVQSSSTFRPLHISWVNFKDNSVNWNEEFSLQVKCEECTKLPNISYSW
DLFLINATETNGMEVSFCRATDLLGSSSLSGDILTIPKSDLPSRIKRMAIPMPRTTPFPK
DASGQAIKQLAQSAPGKASISATSINIKIGFHHVNDTSHWENSSPSALEDPVQKVLFYPK
QSLLEKKSVVRSTQGEKLASTELPQNSSYISDFEFYYSNIKEAMEPSRGRHPENISITEL
NENEDTDTLFDNDDGYNLIDSSYSTENTAPLLMVDWSKSLISRTVFQSYTSSGITSKTVT
FKPFFLKGGETYVIQASVVSSHNPLGKAQLYFTVNEVPNKMSCQVQPSHGYEAYTVFSVF
CMSGKADYYYEFSYQIGKSSKIPLYRGRDIQYYFTLPAGEIMDKYKVTVFMEITNRYGSK
SHPCAVNVTVLPTFHRNISSLNYRPEEDLYNSSLKNLTTLLLMGNYGEIRNYIIMLTRIL
NHFYTEDQSFVFDLQSQMRNLLISSVCNLSFQDQEEIADSILMLNELINISKQVTFNSVV
LIIKYVRKLIDHKLSGQFVMKKELMSKVVFLASKLMEVKEKEKSKNAKHFKEELIISIAT
LLLNYVSSSKELQFNIRTEQLGFQTRLYYSFHNSVEHIGSVKVYLPDALDEDISGRMELD
SQCYISQLIYFKEYPYLEERVPVQTSGAVVALSLYNCITKRKIMIKRLKNPVRVVFEKNY
DLDGGQNKTIFSLYRDKMNFHYFSGLPEASQESLQIVVEFSKTNRRTFPIMLLVRFSEKP
TVSTFNIKQIRSWDEQVVQIYIPAVSLKDASSGYLSLLDANYDQKPTNKYLANTVNYTVS
FHWIRCLFWDENRGWISEGSYPQQGTTPQIVNCSYNHFTTFTVVRRKLNASFEVNDVSFL
KSISQNLFPSILVMFFMLLFAFLAIVSKHRDLHEQKKNGYIFLQENSQASDKQIYAVIID
TGFRAQAQLTAKVHIVFYGEYEFSETRELYCPDKPLFERNSRHTFIVSIPNNLGPLWKIH
LWHDNSGCSPNWYISHVIVKDLITGASWFFPAECWLAVNKWAGKVDQELTPLRNGLGFRK
LLYSKFTEYLEDFHMWISVYSRPSYSCFTHTERLIVCLFLVFGYMSINAALIAMEQEEQV
PEIGLPDVSIVSLMNGVLSIFIISPMALLLSLLFRLSKRTTRNLIENQYKSQRGSPVYSA
KDHDFHQWTQNFQNKYEQNILEEFTLEASPGNENEKKEGSGTSSPRYSRHLGDYSIDVFQ
KIDIFQKIDVFQGIWVTTALTYSKRIPHSCILYFVYKMNFVVVFSLEPYNRLEEPALQKR
MVLPLWLSHVAWITCGLVSVACGLVTGLLGYRFGPSKCVQWIHSVFFSIVGCIFVAQPLV
IFFVALTLAWRKKDHKGFFIEALYDATKNLEYELHHFSKNCALYPTYCCIPHTAADFEKI
LVARQRARYLQWVHPPTSAQLKEARGRIRKEGLLQTAIRNFFTYILMLFLLLFIIFGKNS
HHEYVLNQAIRNEFIRNARNSFIEVKNADDWWNWSLTTLLDGLYWDKQNSIDMPKTQSGP
LGGKCHLIGTSVIRQLKFIGQLTIPVEASSFVHQPGNQDNKNILQSDSEKLKVTQTKRCL
HCDQVENEDGKLSVVNLGRTRDRAYSVLINLRNSGWIDKRTRKISMHFALYNPPTNLFTS
VSLLAEVSPIGDFITSSVVESFSIYHTQSAMSYCIMFSELVFLLFSLIHLCFQMFTMIQK
GILSYWQDSWNWLEMCLIGMSLSYFAHSIFHFILVVDVIDQFHKGFFQEFVDFNLLLSWH
QRNRCLQGILLFLLLIKCLRLLGIYKAIAPSLTMMRLSCSNIIWPMLAGVLFTAAYSYLG
RILFSTHAFSFRSFGDSFQMLLLYFLGTNEKGTFFSLCKSNQYTIVYYYGTLFMAVIILW
SGILRGVLISFMQNAKRSFRSQHLVRFKDVADGTWEKVLCFLGIKRSVVALERTVENSNF
YLDEFENLLDELLLRVNGLYYSLHCSSLETPASDQEEVEXKDKTLAYNFKSTSVCGKQYI
ALSFAKSYKSLDPW
NT seq
8685 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatgcaggaactgttgtccccatggaaggaggtttttggaaacagacttggaga
ttactaatccaagtaatgcttttttggatccttttggcagcttccattcctgggaacaac
tcaaatgatgactcagaggatggaatatgctggttccttggctgcaataattcttaggcc
ctcaaataagtaaaagcagaataccttactgcaagtgattttgaaagagacagttttgat
tattccaaattttgtgctccagacagacatcctaagattgcctatttattttatcaggat
gattcagggaatatcatatcttacatgnctatcctcagagtgctcactgtcagcatgcag
actagaaaagcaaaaacaaaagataatcagagactagattagggacatctgtgtatacct
aaaaatttcatctgtaattggaccttagaaaatgatttactacttacttctgggattcct
ataatagtctgcagatgcctggagatgagactacatataattggtttgacagtttccaat
gtaacatccactgcaccaattcaggatttgtttaatgtgacattggaaaaagtaggtgtt
ggacttcttgaatctgataattcatctccagcagtgcttattctgttaccattaaagcat
atttcaaaaactgttaaaaacctgatttcaagtttcaatgatgaaaaaaagcaaactctt
ccaatttggggcagcagtaataataggtctattaacatcacatttaatgttcctgaaata
tgtgatctctctgtgtcagtgttcaatccccacaaccatatcctcttcattcaatgtctt
gctgggcacatcagaataggaggttcatatattgatgggaagtctgcttttccacttaag
atgaaccaaactagcctttggatgcctgaaaacaacaaacagttttcccaggagctggga
tttggtgttcatacttcttcagacaatatcacttctctcgtgtttgattttggggatggt
acagtagttcaagtcagcatccaagatgggtctgatgaaatagaaatcattacttatcac
caatatagaaaagagggcacatatatgatcaaagtgattattttcaatgagtttcatgga
aatgaaaaggagttaggaccatattatgtagaaatagctcaacaagatttgagggtattc
atgaattctagcagtgtccataaggatgaaatcctattttttgctagctccttacaaaga
acaacaactggaaaatatacaagaagcatgagtgattatactatctctatgaataaagga
cccattgttatacataaattttcatctacttcttcatataatgtgttcctaatggtacca
aacagaacaaatggctgtcaagattggaccaatgtgaatgttcagtatcaaatgcaagct
gtttctatctttacaaatggcacagtgtttgccagtgattctgaggtcacattttttgtt
catacaaatgaaatgagtcctctagagtttgtttggcattttggagatggttcatggaca
agaacaacttcaagaagtgttaaaaaaagatacagtgttcccaagaagtattatgtgata
gttaatgctgccaatcagatcaactctgttgcttctaacattcacactatcagtatagag
cggaaaattgttccaaatcggcttgtgtccagctcctcagctctaataaattccagtgtg
acttttgagtgcagaatcaactttggtacaaatgttacttacatatggaactttggtgat
gatactatccatcctggaaagtgggttgagagtcacatatatacgagggaaggagaattt
acagtggaggttcttatctttaatagtgtcagcattgcaactctaaaaaagcaagttttc
atcgtgtccaaaccctgccagccacctttggtgaaaaacatggggcctgggagaatacag
atttggcgacatcaacctgttaagcttggagttacttttgaagctcccattcagtgtgat
atttcccaaggccttaactatagctggtccttaatgaagtctgatggctcactagtgttg
cttccaactgctctcaacaagcacagacaaaccattcttcttcccagctactttttggaa
tatggaaactatactgcacttgcaaaggttaaaatagaaggcagcatggtgtatagtaat
tattcagcggttattgaagtggtttcccagtcacctgtcagtgtgatttcagaggggacc
cacctattgatctcgaagacccttttttccattattgtactcaacggttcacaatccttt
gatcctgattatcctggaactcatttaaagtattactggaaatgtgtcccagcaagtaaa
ccaaaacacacatgtttcaactctctcaagttcaacaatagtgcatcagtcatctctttc
ccagcatcacttctttatgactcctatgaccaatttttagtgacactgatggtgtctaac
ggaaaccgaaactcttctgaagcacaggtgttcctgtcagttcaatcaagttctacattc
agaccactccacatttcttgggttaactttaaagacaattctgtgaactggaatgaagaa
ttttctctccaagtgaagtgtgaagaatgtaccaagttgcctaacatttcttattcttgg
gatctttttttaatcaatgcaacagaaacaaatggcatggaagtttctttttgtagagct
acagatctgctaggctcatcaagcctgagtggtgatattttgacaattccaaagtcagat
ctaccctccaggataaaaagaatggctattcctatgccaagaaccacacctttcccaaaa
gacgcctctgggcaggctatcaagcagctggcccaatctgctccagggaaagcctccatt
tctgcaacctccataaacattaaaattggatttcatcatgtaaatgataccagtcactgg
gagaacagtagtccctcagctctggaagatcctgttcagaaagtgctattttatccaaag
caaagcttactagaaaaaaaatctgtcgtaagatccactcagggagaaaagttagcaagc
actgagctaccacaaaattcttcttacatttctgattttgaattttattacagcaatatc
aaggaggcaatggaaccatcaagaggaagacatccagagaatatcagtatcacagaacta
aatgaaaatgaagatacagatactctgtttgacaatgatgatggttacaacttaattgat
tcatcctactccactgaaaatactgcacccttgcttatggtggattggtccaaatcatta
attagcagaactgtttttcaaagctacacatcttcaggtatcacatcaaaaactgttaca
tttaaaccatttttcctgaaaggtggagagacatatgtgatacaagcttctgtagtctca
agccacaatccattaggcaaagcacaattatattttactgtcaatgaagttccaaacaag
atgtcttgccaagtacagcccagtcacggttatgaggcttatacagtcttcagtgttttc
tgcatgtctgggaaagcagactactattatgaattcagttaccaaataggaaaatcctcc
aaaatacctttatatagagggagagatatacaatattacttcactttgcccgctggtgaa
attatggacaaatataaagtaactgtctttatggagatcacaaacagatatggctctaaa
tctcatccttgtgctgtgaatgtgacagtactgccaactttccataggaacatatcatct
ttgaattacaggccagaagaggatctgtataattcaagtcttaaaaatctaaccactctc
ctacttatgggaaactatggagaaattagaaattatataataatgttaactagaattctg
aatcatttctatacagaagaccaaagttttgtctttgacctacagtcacaaatgaggaat
ttattgatttcttcagtgtgcaacttatctttccaggaccaggaagaaattgctgattct
attctaatgttgaatgaattaataaatatctccaagcaggtaacatttaacagtgtggtt
ttgataatcaaatatgtcagaaaattaattgaccacaagttatctggccaatttgtgatg
aaaaaggagctgatgtctaaggtggtctttctagcatcaaagttaatggaagtgaaagaa
aaggaaaaatctaagaatgcaaagcatttcaaagaagaactcattataagcattgcaacc
ttgctactgaactatgtttcttcgagtaaggaacttcagtttaatattagaactgagcag
ttgggattccaaaccagactatattacagttttcacaactctgttgaacatattggctct
gttaaggtctacttaccagatgctctagatgaggacatttctggtagaatggaattggac
agccagtgctacatcagccagctaatatacttcaaggaatatccctatttggaagagaga
gttcctgttcagaccagtggagctgtggttgccctgagcctctacaactgcattactaaa
aggaaaatcatgataaaaagactgaagaatccagtcagagtagtatttgagaaaaattat
gatctggatggtgggcaaaataaaacaatattttcattgtatcgagacaaaatgaacttc
cattatttctctgggcttcctgaggcctcccaggaatctttacagatagtggtggaattt
tctaaaaccaacagaagaactttccccataatgctgcttgtcagattctctgaaaaacct
actgtgtctacttttaacataaaacagattcgctcctgggatgagcaagttgttcagatt
tatatacctgctgtttccctgaaagatgcatcatctggttatttatccttgttggatgct
aattatgaccaaaagcctacaaacaaatatctagctaacactgtgaactatactgtcagt
ttccactggataagatgcctattttgggatgagaatagaggatggatatcagagggttct
tatccacagcagggaactactccacaaatagttaattgcagctacaatcattttacaaca
ttcactgttgtaagaagaaaactaaatgccagctttgaagtgaatgatgtatctttttta
aagagcatctcacaaaacctgttccccagtattctcgttatgttttttatgcttcttttt
gcttttttggccattgtaagcaaacacagagatctacatgaacaaaagaagaatggctat
attttcttacaggaaaactcccaggctagcgacaagcagatctatgcagttattattgac
acaggttttcgagcccaagcacagttgactgcaaaggttcacattgttttctatggagaa
tatgaattttcagagaccagagagctttattgtccagacaagcccttgtttgaaagaaac
tccaggcatacctttatagtaagtattccaaataatctaggcccactttggaaaatccac
ctttggcacgataacagtggatgttctccaaattggtacatcagccatgtgattgtgaaa
gatttaatcactggagcaagttggttctttcccgctgaatgctggttagctgtgaacaag
tgggcagggaaagttgatcaagagctcactcctctcagaaatggacttggtttcaggaaa
cttttgtactccaaattcactgagtacctagaagattttcatatgtggatatcagtatat
agccgtccatcctatagttgcttcactcatactgagaggcttatagtttgccttttcttg
gtatttggctatatgtctatcaatgctgcattgattgccatggaacaagaagagcaggtt
cctgaaattggcctcccagatgtctctatagtctctttaatgaatggtgtgctttctatt
ttcatcatctctccaatggcattattgttgtctctgttattcaggctcagtaagagaacc
actaggaatctcattgaaaaccaatataaatcccaaagaggatctccagtatattcagca
aaggatcatgatttccatcaatggacacaaaattttcaaaataaatatgagcaaaacata
ttggaggaatttactctggaggcttcccctggaaatgagaatgagaagaaagaaggaagt
ggcacttcctctcccagatactccaggcatttgggtgactacagcattgacgtattccaa
aagatagacatattccaaaagatagacgtattccaaggcatttgggtgactacagcattg
acgtattccaaaagaatcccacattcatgtattttgtattttgtttacaaaatgaatttt
gttgtggtcttctccttagagccctacaataggttagaagaaccagctctgcaaaaacgg
atggttcttcctctttggttgtcccatgtggcttggatcacttgtgggctagtttctgtg
gcttgtgggttggtgacaggactgctaggatacaggtttggtccttcaaagtgtgtccag
tggatccattcagtattcttttccattgtgggctgtatttttgttgcccagccacttgtg
atattctttgtggctttgaccctagcttggagaaaaaaagaccacaaaggtttctttatt
gaagcattatatgatgcaaccaagaaccttgaatatgaattgcatcatttttccaagaat
tgtgccctgtaccctacatactgttgcattccccacactgcagctgactttgaaaaaata
ctagtggcccgtcaaagagcacgttatttacagtgggttcacccaccaacttcagcccaa
ttgaaagaagccagaggaagaattagaaaagaaggtctcttacaaacagcaataagaaac
tttttcacgtatatactaatgttgtttctacttttatttatcatatttggaaaaaattcc
catcatgaatatgttcttaatcaagccatccgtaatgaatttataagaaatgccagaaac
tctttcattgaagtgaagaatgcggatgactggtggaattggagtttgacaactttattg
gatggcctatactgggataaacagaatagtattgatatgccaaagactcagtctggaccc
cttggagggaaatgccatctgataggcacttcagtaattagacagctaaagttcatcgga
caacttacaattcctgttgaagcttcttcttttgtacatcagccggggaatcaagataat
aaaaatattcttcagtcagactcagaaaaactgaaagtgacccagaccaaaagatgcctc
cattgtgatcaagtagaaaatgaagatggcaaattatctgtcgtgaacctgggcaggaca
agggacagagcttactcagttctgattaacctaaggaatagtgggtggatagataaaaga
accaggaagatctctatgcattttgccctctacaaccctcctaccaatcttttcaccagt
gtgtccttgttggcagaagtgtcacccattggtgacttcattacatcatccgttgtggag
tcatttagcatctatcatacccaatctgctatgagttactgcatcatgttttctgagttg
gttttcctgttatttagtctcattcacctctgctttcaaatgttcactatgattcagaaa
gggatcctcagctactggcaagactcatggaattggctagagatgtgcctaattggaatg
agtctttcttattttgcacactccatttttcattttatccttgtggtggatgtgattgat
caatttcataagggatttttccaagaatttgtggacttcaatcttcttctatcctggcat
cagaggaaccgatgtcttcaaggaatccttttattcctcttgttaataaaatgtcttcgt
ctccttggcatttacaaagcaattgctcctagtttgaccatgatgcgactatcctgctcc
aacattatttggccaatgctggctggcgtcctgtttacagcagcctactcataccttggg
cgaattctgttctcaactcatgccttttcatttagaagctttggagactccttccaaatg
ctgttgctgtattttctgggaaccaatgagaagggaacattctttagtctttgcaagtct
aatcagtataccatagtttattattatggaacccttttcatggcagtgatcatattgtgg
tctggaatattgagaggagtccttatttcttttatgcaaaatgcaaaacgatcttttcga
agtcaacatctggtgagattcaaagatgtcgctgatggtacttgggagaaggtgctctgc
tttctgggaataaaaagatcagtggtagcattggaaaggactgtggagaacagtaatttc
tatctggatgaatttgaaaatttgttggatgaacttctgttgagagttaatggattatac
tacagtcttcattgttcttctctagaaacaccagctagtgaccaagaagaggtggagtga
aaggacaagactctagcttacaacttcaaatcaacttctgtctgtggaaagcaatacata
gctttgtcatttgcaaaatcatataagtctttagatccttggtag
DBGET
integrated database retrieval system
