Sarcophilus harrisii (Tasmanian devil): 100921014
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Entry
100921014 CDS
T02286
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03020
RNA polymerase
shr03420
Nucleotide excision repair
shr05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100921014 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
100921014 (POLR2B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100921014 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100921014 (POLR2B)
03400 DNA repair and recombination proteins [BR:
shr03400
]
100921014 (POLR2B)
Enzymes [BR:
shr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100921014 (POLR2B)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100921014 (POLR2B)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100921014 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
100921014
NCBI-ProteinID:
XP_003773281
Ensembl:
ENSSHAG00000016080
UniProt:
G3WU38
LinkDB
All DBs
Position
6:40322387..40352955
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaggatatgcaatatgatgaagatgatgatgaaatcactccagat
ttgtggcaagaagcttgctggattgttattagttcctattttgatgaaaagggtttggtc
cgacaacaactggattctttcgatgagttcattcaaatgtctgtgcagagaattgtggag
gatgccccgcccattgatttgcaagctgaagctcagcatgctactggggaggttgaagaa
ccgcctcgatatctgctgaagtttgaacaaatttatctttccaagccaactcattgggaa
agagacggtgctccttcccccatgatgccgaatgaagcccgactgaggaatctcacgtat
tctgctcctctttatgtggatatcactaaaacagttattaaagagggagaagaacagctt
caaacacagcatcaaaaaacatttataggaaaaattccaattatgcttcgttcaacatac
tgtctgctaaatggcttaactgaccgtgatctctgtgaattaaatgaatgccctcttgat
cctggtggctatttcattattaatggatcagaaaaggttcttattgcccaagagaaaatg
gcaacaaacacagtatatgtgtttgctaaaaaggattccaaatatgcttatacaggagaa
tgtaggtcatgcctggagaattcttcccgacccacaagtactatatgggttagcatgctt
gcaagaggaggacagggtgcgaaaaagagtgcaattggtcagcgcattgtagctacctta
ccctacatcaagcaagaagttcccattattattgtgtttcgagcattaggttttgtgtct
gacagagacatcttagaacatattatttatgattttgaagacccagagatgatggaaatg
gtcaaaccttctttggatgaagcttttgtcatccaggagcagaatgttgcactcaatttt
attggctcaagaggagcaaagcctggtgtcactaaggagaaaagaattaaatatgcaaaa
gaagttttacaaaaagaaatgcttcctcatgttggtgtcagtgacttttgtgaaacaaaa
aaagcctatttcctaggatatatggttcatagattacttctggctgctctgggaagaagg
gaactggatgacagagatcactatggaaacaaaagactggatctggctggtcctttgctt
gcattcttgtttagaggcatgtttaagaatttacttaaagaagtgagaatatacgcacaa
aaatttattgatagaggcaaggacttcaacttggagttggcaattaaaacaaggatcata
tcagatggcttaaaatattctttagccactgggaactggggtgaccaaaagaaagctcac
caggctagagctggagtgtcccaggtgttaaaccgtctgacttttgcatctactctttct
cacttgcgtcgtttgaactcaccaattggaagagatggtaaattagcaaagccaagacag
ttgcataatacattgtggggaatggtgtgtcctgctgagactccagagggtcatgctgta
ggacttgtgaagaatttagctttgatggcttatatttctgttggatcccagccttctcca
attctggagtttttggaagaatggagcatggaaaacttagaagaaatttctcctgctgct
attgccgatgcaaccaagatctttgttaatggctgctgggttggaatacacaaagatcca
gaacaactcatgaacaccctgaggaaattgcgacgccagatggatatcattgtctctgaa
gtttctatgatcagagatattcgtgagagagagattcggatttatacagatgctggccga
atttgcagaccacttttaattgttgaaaaacagaagctactcttgaagaaaaggcacatt
gatcaactgaaagaacgcgaatataacaattacagttggcaagacctggtggccagtgga
gtggtggaatacattgataccctggaagaagagacggtaatgctggccatgactcccgac
gacttacaggagaagggtgtggcgtattgttccacttacacccactgtgaaattcacccc
tcaatgatccttggggtgtgtgcatcgattattccttttcctgatcataatcagtctcct
agaaacacctatcagtctgctatgggtaaacaagcgatgggtgtttatattaccaacttt
catgttcgtatggacacactggctcatgtgctctattatcctcaaaagcctcttgtgact
acacgctccatggaatatctgcgatttagagagctgccagcaggtatcaactcaattgtg
gctattgcatcatacactggatataatcaagaagattctgttatcatgaaccgttctgca
gttgatagaggttttttcaggtcagttttttatcggtcttacaaagaacaggaatctaag
aaaggatttgaccaagaagaggtatttgagaaaccaacacgtgaaacatgccagggcatg
aggcatgctatctatgacaagttagatgatgatggtttgatagctcctggtgtccgtgta
tcaggagatgacgttatcattggcaaaacagtaactctgcctgaaaacgaagatgaactg
gagagcactaataggcgttacaccaagagagactgcagcaccttcctcagaactagtgag
actggtattgtggatcaggtgatggtaaccttgaaccaggaaggatataagttttgcaag
ataagggtacgctctgttagaatcccacagattggagacaaatttgccagtcgacacggt
cagaagggtacttgtggtatccagtacagacaagaggatatgccttttacttgtgaaggt
atcacccctgatatcatcataaacccccatgccatcccttctcgtatgactattggtcac
ttgattgaatgtcttcaagggaaggtgtcagctaacaaaggtgaaattggtgatgccaca
ccatttaatgatgctgttaatgtgcagaagatttctaatctgttatctgattatggttac
catctcagaggaaatgaggtcttgtacaatggatttactggccgaaaaatcacatctcag
atttttattggccccacttattaccagcgtttgaagcatatggtggacgataagatccat
tcccgggccagaggacctatacagatccttaacagacaacccatggagggtagatctcgc
gatggtggcctgcgttttggagaaatggaacgagactgtcagattgcgcatggtgcagcc
cagtttctaagggaaagattatttgaagcatcggatccctatcaagttcacgtatgcaat
ctttgtggaatcatggcgatagctaacaccaggacacacacgtatgagtgtagaggctgt
cgtaataaaactcagatttctttggttcgaatgccttatgcttgtaaactccttttccaa
gaattgatgtctatgagcatagcacctcgaatgatgagtgtttag
DBGET
integrated database retrieval system
